Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G20010

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019685: photosynthesis, dark reaction0.00E+00
2GO:0002184: cytoplasmic translational termination0.00E+00
3GO:0006223: uracil salvage0.00E+00
4GO:0017038: protein import0.00E+00
5GO:0016553: base conversion or substitution editing0.00E+00
6GO:0090279: regulation of calcium ion import0.00E+00
7GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
8GO:0090470: shoot organ boundary specification0.00E+00
9GO:0042820: vitamin B6 catabolic process0.00E+00
10GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
11GO:0042821: pyridoxal biosynthetic process0.00E+00
12GO:0042407: cristae formation0.00E+00
13GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
14GO:0071474: cellular hyperosmotic response0.00E+00
15GO:0018023: peptidyl-lysine trimethylation0.00E+00
16GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
17GO:0034337: RNA folding0.00E+00
18GO:0015995: chlorophyll biosynthetic process2.78E-12
19GO:0006782: protoporphyrinogen IX biosynthetic process3.17E-06
20GO:0055114: oxidation-reduction process4.97E-06
21GO:0010207: photosystem II assembly1.08E-05
22GO:1901259: chloroplast rRNA processing1.33E-05
23GO:0010027: thylakoid membrane organization2.22E-05
24GO:0048564: photosystem I assembly3.08E-05
25GO:0071482: cellular response to light stimulus4.33E-05
26GO:0032544: plastid translation4.33E-05
27GO:0006783: heme biosynthetic process5.86E-05
28GO:0006779: porphyrin-containing compound biosynthetic process7.70E-05
29GO:2001141: regulation of RNA biosynthetic process8.56E-05
30GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly8.56E-05
31GO:0009658: chloroplast organization1.38E-04
32GO:0010021: amylopectin biosynthetic process1.48E-04
33GO:0045038: protein import into chloroplast thylakoid membrane2.26E-04
34GO:0016120: carotene biosynthetic process2.26E-04
35GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.19E-04
36GO:0015979: photosynthesis3.30E-04
37GO:0048363: mucilage pectin metabolic process5.20E-04
38GO:0009443: pyridoxal 5'-phosphate salvage5.20E-04
39GO:1902478: negative regulation of defense response to bacterium, incompatible interaction5.20E-04
40GO:0043489: RNA stabilization5.20E-04
41GO:0015671: oxygen transport5.20E-04
42GO:1904966: positive regulation of vitamin E biosynthetic process5.20E-04
43GO:0005980: glycogen catabolic process5.20E-04
44GO:0043953: protein transport by the Tat complex5.20E-04
45GO:0000481: maturation of 5S rRNA5.20E-04
46GO:0015801: aromatic amino acid transport5.20E-04
47GO:0042547: cell wall modification involved in multidimensional cell growth5.20E-04
48GO:1904964: positive regulation of phytol biosynthetic process5.20E-04
49GO:0065002: intracellular protein transmembrane transport5.20E-04
50GO:0043686: co-translational protein modification5.20E-04
51GO:1902458: positive regulation of stomatal opening5.20E-04
52GO:0051262: protein tetramerization1.12E-03
53GO:0010275: NAD(P)H dehydrogenase complex assembly1.12E-03
54GO:0010198: synergid death1.12E-03
55GO:1900871: chloroplast mRNA modification1.12E-03
56GO:1902326: positive regulation of chlorophyll biosynthetic process1.12E-03
57GO:0006432: phenylalanyl-tRNA aminoacylation1.12E-03
58GO:0018026: peptidyl-lysine monomethylation1.12E-03
59GO:0000256: allantoin catabolic process1.12E-03
60GO:0071668: plant-type cell wall assembly1.12E-03
61GO:0006423: cysteinyl-tRNA aminoacylation1.12E-03
62GO:0006435: threonyl-tRNA aminoacylation1.12E-03
63GO:0080183: response to photooxidative stress1.12E-03
64GO:1903426: regulation of reactive oxygen species biosynthetic process1.12E-03
65GO:0005982: starch metabolic process1.17E-03
66GO:0009089: lysine biosynthetic process via diaminopimelate1.57E-03
67GO:0009773: photosynthetic electron transport in photosystem I1.57E-03
68GO:0006352: DNA-templated transcription, initiation1.57E-03
69GO:0009735: response to cytokinin1.73E-03
70GO:0033591: response to L-ascorbic acid1.83E-03
71GO:0010136: ureide catabolic process1.83E-03
72GO:0034051: negative regulation of plant-type hypersensitive response1.83E-03
73GO:0015940: pantothenate biosynthetic process1.83E-03
74GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.83E-03
75GO:0005977: glycogen metabolic process1.83E-03
76GO:0009266: response to temperature stimulus2.31E-03
77GO:0009817: defense response to fungus, incompatible interaction2.46E-03
78GO:0009102: biotin biosynthetic process2.66E-03
79GO:0009152: purine ribonucleotide biosynthetic process2.66E-03
80GO:0010601: positive regulation of auxin biosynthetic process2.66E-03
81GO:0046653: tetrahydrofolate metabolic process2.66E-03
82GO:0009052: pentose-phosphate shunt, non-oxidative branch2.66E-03
83GO:0033014: tetrapyrrole biosynthetic process2.66E-03
84GO:0006424: glutamyl-tRNA aminoacylation2.66E-03
85GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity2.66E-03
86GO:0006145: purine nucleobase catabolic process2.66E-03
87GO:0010371: regulation of gibberellin biosynthetic process2.66E-03
88GO:0009765: photosynthesis, light harvesting3.58E-03
89GO:0044206: UMP salvage3.58E-03
90GO:0010109: regulation of photosynthesis3.58E-03
91GO:0048511: rhythmic process3.90E-03
92GO:0006412: translation3.91E-03
93GO:0035428: hexose transmembrane transport4.27E-03
94GO:0006633: fatty acid biosynthetic process4.45E-03
95GO:0016123: xanthophyll biosynthetic process4.59E-03
96GO:0000304: response to singlet oxygen4.59E-03
97GO:0080110: sporopollenin biosynthetic process4.59E-03
98GO:0046907: intracellular transport4.59E-03
99GO:0032543: mitochondrial translation4.59E-03
100GO:0006564: L-serine biosynthetic process4.59E-03
101GO:0031365: N-terminal protein amino acid modification4.59E-03
102GO:0043097: pyrimidine nucleoside salvage4.59E-03
103GO:0016117: carotenoid biosynthetic process5.50E-03
104GO:0000470: maturation of LSU-rRNA5.69E-03
105GO:0006655: phosphatidylglycerol biosynthetic process5.69E-03
106GO:0010190: cytochrome b6f complex assembly5.69E-03
107GO:0006206: pyrimidine nucleobase metabolic process5.69E-03
108GO:0046323: glucose import6.41E-03
109GO:0009955: adaxial/abaxial pattern specification6.87E-03
110GO:0030488: tRNA methylation6.87E-03
111GO:0009854: oxidative photosynthetic carbon pathway6.87E-03
112GO:0019252: starch biosynthetic process7.41E-03
113GO:0009395: phospholipid catabolic process8.14E-03
114GO:0048437: floral organ development8.14E-03
115GO:0006614: SRP-dependent cotranslational protein targeting to membrane8.14E-03
116GO:0005978: glycogen biosynthetic process9.47E-03
117GO:0006605: protein targeting9.47E-03
118GO:0032508: DNA duplex unwinding9.47E-03
119GO:2000070: regulation of response to water deprivation9.47E-03
120GO:0000105: histidine biosynthetic process9.47E-03
121GO:0016559: peroxisome fission9.47E-03
122GO:0022900: electron transport chain1.09E-02
123GO:0015996: chlorophyll catabolic process1.09E-02
124GO:0007186: G-protein coupled receptor signaling pathway1.09E-02
125GO:0006526: arginine biosynthetic process1.09E-02
126GO:0017004: cytochrome complex assembly1.09E-02
127GO:0009821: alkaloid biosynthetic process1.24E-02
128GO:0010206: photosystem II repair1.24E-02
129GO:0019432: triglyceride biosynthetic process1.24E-02
130GO:0043067: regulation of programmed cell death1.39E-02
131GO:0048354: mucilage biosynthetic process involved in seed coat development1.39E-02
132GO:0031425: chloroplast RNA processing1.39E-02
133GO:0018298: protein-chromophore linkage1.51E-02
134GO:0006535: cysteine biosynthetic process from serine1.55E-02
135GO:0015031: protein transport1.62E-02
136GO:0019684: photosynthesis, light reaction1.72E-02
137GO:0008285: negative regulation of cell proliferation1.72E-02
138GO:0006415: translational termination1.72E-02
139GO:0009684: indoleacetic acid biosynthetic process1.72E-02
140GO:0007568: aging1.75E-02
141GO:0005983: starch catabolic process1.90E-02
142GO:0016024: CDP-diacylglycerol biosynthetic process1.90E-02
143GO:0045037: protein import into chloroplast stroma1.90E-02
144GO:0009853: photorespiration1.92E-02
145GO:0045087: innate immune response1.92E-02
146GO:0009767: photosynthetic electron transport chain2.08E-02
147GO:0009725: response to hormone2.08E-02
148GO:0006094: gluconeogenesis2.08E-02
149GO:0006810: transport2.19E-02
150GO:0009451: RNA modification2.19E-02
151GO:0010020: chloroplast fission2.27E-02
152GO:0006631: fatty acid metabolic process2.28E-02
153GO:0005975: carbohydrate metabolic process2.35E-02
154GO:0006629: lipid metabolic process2.48E-02
155GO:0006397: mRNA processing2.64E-02
156GO:0000162: tryptophan biosynthetic process2.66E-02
157GO:0006636: unsaturated fatty acid biosynthetic process2.66E-02
158GO:0019762: glucosinolate catabolic process2.66E-02
159GO:0019344: cysteine biosynthetic process2.86E-02
160GO:0009116: nucleoside metabolic process2.86E-02
161GO:0006289: nucleotide-excision repair2.86E-02
162GO:0008299: isoprenoid biosynthetic process3.07E-02
163GO:0006418: tRNA aminoacylation for protein translation3.07E-02
164GO:0010073: meristem maintenance3.07E-02
165GO:0031408: oxylipin biosynthetic process3.28E-02
166GO:0061077: chaperone-mediated protein folding3.28E-02
167GO:0016114: terpenoid biosynthetic process3.28E-02
168GO:0003333: amino acid transmembrane transport3.28E-02
169GO:0010431: seed maturation3.28E-02
170GO:0009814: defense response, incompatible interaction3.50E-02
171GO:0016226: iron-sulfur cluster assembly3.50E-02
172GO:0080092: regulation of pollen tube growth3.50E-02
173GO:0019748: secondary metabolic process3.50E-02
174GO:0009625: response to insect3.72E-02
175GO:0010227: floral organ abscission3.72E-02
176GO:0006012: galactose metabolic process3.72E-02
177GO:0042254: ribosome biogenesis3.76E-02
178GO:0006096: glycolytic process3.94E-02
179GO:0010584: pollen exine formation3.95E-02
180GO:0051028: mRNA transport4.18E-02
181GO:0000271: polysaccharide biosynthetic process4.42E-02
182GO:0042335: cuticle development4.42E-02
183GO:0009409: response to cold4.50E-02
184GO:0006520: cellular amino acid metabolic process4.66E-02
185GO:0045489: pectin biosynthetic process4.66E-02
186GO:0010197: polar nucleus fusion4.66E-02
187GO:0010182: sugar mediated signaling pathway4.66E-02
188GO:0009741: response to brassinosteroid4.66E-02
189GO:0006396: RNA processing4.87E-02
190GO:0009646: response to absence of light4.91E-02
191GO:0042752: regulation of circadian rhythm4.91E-02
RankGO TermAdjusted P value
1GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
2GO:0005048: signal sequence binding0.00E+00
3GO:0004076: biotin synthase activity0.00E+00
4GO:0019144: ADP-sugar diphosphatase activity0.00E+00
5GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
6GO:0043864: indoleacetamide hydrolase activity0.00E+00
7GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
8GO:0008887: glycerate kinase activity0.00E+00
9GO:0050613: delta14-sterol reductase activity0.00E+00
10GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
11GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
12GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity0.00E+00
13GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity0.00E+00
14GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
15GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
16GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
17GO:0003858: 3-hydroxybutyrate dehydrogenase activity0.00E+00
18GO:0045435: lycopene epsilon cyclase activity0.00E+00
19GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity0.00E+00
20GO:0004822: isoleucine-tRNA ligase activity0.00E+00
21GO:0004853: uroporphyrinogen decarboxylase activity0.00E+00
22GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
23GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
24GO:0005528: FK506 binding1.70E-08
25GO:0003755: peptidyl-prolyl cis-trans isomerase activity7.68E-08
26GO:0070402: NADPH binding1.37E-07
27GO:0016851: magnesium chelatase activity6.52E-07
28GO:0016491: oxidoreductase activity5.02E-06
29GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase1.19E-05
30GO:0019843: rRNA binding1.53E-05
31GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.48E-04
32GO:0016987: sigma factor activity1.48E-04
33GO:0001053: plastid sigma factor activity1.48E-04
34GO:0008266: poly(U) RNA binding2.18E-04
35GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity5.20E-04
36GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity5.20E-04
37GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity5.20E-04
38GO:0005227: calcium activated cation channel activity5.20E-04
39GO:0004856: xylulokinase activity5.20E-04
40GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity5.20E-04
41GO:0009496: plastoquinol--plastocyanin reductase activity5.20E-04
42GO:0008184: glycogen phosphorylase activity5.20E-04
43GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity5.20E-04
44GO:0004645: phosphorylase activity5.20E-04
45GO:0080042: ADP-glucose pyrophosphohydrolase activity5.20E-04
46GO:0005080: protein kinase C binding5.20E-04
47GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity5.20E-04
48GO:0004325: ferrochelatase activity5.20E-04
49GO:0042586: peptide deformylase activity5.20E-04
50GO:0016784: 3-mercaptopyruvate sulfurtransferase activity5.20E-04
51GO:0005344: oxygen transporter activity5.20E-04
52GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity5.20E-04
53GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity5.20E-04
54GO:0004033: aldo-keto reductase (NADP) activity6.79E-04
55GO:0048038: quinone binding1.09E-03
56GO:0004617: phosphoglycerate dehydrogenase activity1.12E-03
57GO:0015173: aromatic amino acid transmembrane transporter activity1.12E-03
58GO:0003844: 1,4-alpha-glucan branching enzyme activity1.12E-03
59GO:0004817: cysteine-tRNA ligase activity1.12E-03
60GO:0016630: protochlorophyllide reductase activity1.12E-03
61GO:0004829: threonine-tRNA ligase activity1.12E-03
62GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity1.12E-03
63GO:0019156: isoamylase activity1.12E-03
64GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity1.12E-03
65GO:0004826: phenylalanine-tRNA ligase activity1.12E-03
66GO:0050017: L-3-cyanoalanine synthase activity1.12E-03
67GO:0042389: omega-3 fatty acid desaturase activity1.12E-03
68GO:0080041: ADP-ribose pyrophosphohydrolase activity1.12E-03
69GO:0009977: proton motive force dependent protein transmembrane transporter activity1.12E-03
70GO:0000049: tRNA binding1.80E-03
71GO:0015462: ATPase-coupled protein transmembrane transporter activity1.83E-03
72GO:0005504: fatty acid binding1.83E-03
73GO:0043169: cation binding1.83E-03
74GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.83E-03
75GO:0003913: DNA photolyase activity1.83E-03
76GO:0002161: aminoacyl-tRNA editing activity1.83E-03
77GO:0004751: ribose-5-phosphate isomerase activity1.83E-03
78GO:0004148: dihydrolipoyl dehydrogenase activity1.83E-03
79GO:0030267: glyoxylate reductase (NADP) activity1.83E-03
80GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.83E-03
81GO:0008864: formyltetrahydrofolate deformylase activity1.83E-03
82GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.83E-03
83GO:0031072: heat shock protein binding2.05E-03
84GO:0004792: thiosulfate sulfurtransferase activity2.66E-03
85GO:0016149: translation release factor activity, codon specific2.66E-03
86GO:0043023: ribosomal large subunit binding2.66E-03
87GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.66E-03
88GO:0003735: structural constituent of ribosome2.90E-03
89GO:0003723: RNA binding3.31E-03
90GO:0003746: translation elongation factor activity3.33E-03
91GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds3.58E-03
92GO:0070628: proteasome binding3.58E-03
93GO:0045430: chalcone isomerase activity3.58E-03
94GO:0004045: aminoacyl-tRNA hydrolase activity3.58E-03
95GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity3.58E-03
96GO:0043495: protein anchor3.58E-03
97GO:0016279: protein-lysine N-methyltransferase activity3.58E-03
98GO:0004845: uracil phosphoribosyltransferase activity3.58E-03
99GO:0008374: O-acyltransferase activity4.59E-03
100GO:0003959: NADPH dehydrogenase activity4.59E-03
101GO:0005275: amine transmembrane transporter activity4.59E-03
102GO:0016773: phosphotransferase activity, alcohol group as acceptor4.59E-03
103GO:0004040: amidase activity4.59E-03
104GO:0030570: pectate lyase activity4.66E-03
105GO:0022891: substrate-specific transmembrane transporter activity4.66E-03
106GO:0004332: fructose-bisphosphate aldolase activity5.69E-03
107GO:0031593: polyubiquitin binding5.69E-03
108GO:0004629: phospholipase C activity5.69E-03
109GO:0004556: alpha-amylase activity5.69E-03
110GO:0004130: cytochrome-c peroxidase activity5.69E-03
111GO:0004366: glycerol-3-phosphate O-acyltransferase activity5.69E-03
112GO:2001070: starch binding5.69E-03
113GO:0051287: NAD binding5.88E-03
114GO:0004124: cysteine synthase activity6.87E-03
115GO:0051920: peroxiredoxin activity6.87E-03
116GO:0004849: uridine kinase activity6.87E-03
117GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity6.87E-03
118GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity6.87E-03
119GO:0004435: phosphatidylinositol phospholipase C activity6.87E-03
120GO:0005261: cation channel activity6.87E-03
121GO:0016853: isomerase activity6.90E-03
122GO:0005355: glucose transmembrane transporter activity6.90E-03
123GO:0019899: enzyme binding8.14E-03
124GO:0009881: photoreceptor activity8.14E-03
125GO:0003729: mRNA binding9.01E-03
126GO:0008312: 7S RNA binding9.47E-03
127GO:0004034: aldose 1-epimerase activity9.47E-03
128GO:0005337: nucleoside transmembrane transporter activity9.47E-03
129GO:0016209: antioxidant activity9.47E-03
130GO:0004601: peroxidase activity1.00E-02
131GO:0016788: hydrolase activity, acting on ester bonds1.03E-02
132GO:0008135: translation factor activity, RNA binding1.09E-02
133GO:0008173: RNA methyltransferase activity1.09E-02
134GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water1.09E-02
135GO:0071949: FAD binding1.24E-02
136GO:0003747: translation release factor activity1.24E-02
137GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.39E-02
138GO:0004743: pyruvate kinase activity1.39E-02
139GO:0030955: potassium ion binding1.39E-02
140GO:0016844: strictosidine synthase activity1.39E-02
141GO:0030170: pyridoxal phosphate binding1.61E-02
142GO:0004222: metalloendopeptidase activity1.67E-02
143GO:0047372: acylglycerol lipase activity1.72E-02
144GO:0005089: Rho guanyl-nucleotide exchange factor activity1.72E-02
145GO:0005525: GTP binding1.74E-02
146GO:0015144: carbohydrate transmembrane transporter activity1.78E-02
147GO:0003993: acid phosphatase activity2.00E-02
148GO:0016787: hydrolase activity2.07E-02
149GO:0005351: sugar:proton symporter activity2.07E-02
150GO:0004565: beta-galactosidase activity2.08E-02
151GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.27E-02
152GO:0051537: 2 iron, 2 sulfur cluster binding2.68E-02
153GO:0004857: enzyme inhibitor activity2.86E-02
154GO:0043130: ubiquitin binding2.86E-02
155GO:0051536: iron-sulfur cluster binding2.86E-02
156GO:0003899: DNA-directed 5'-3' RNA polymerase activity3.33E-02
157GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.50E-02
158GO:0003756: protein disulfide isomerase activity3.95E-02
159GO:0004812: aminoacyl-tRNA ligase activity4.18E-02
160GO:0008080: N-acetyltransferase activity4.66E-02
161GO:0051082: unfolded protein binding4.73E-02
162GO:0050662: coenzyme binding4.91E-02
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Gene type



Gene DE type