co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G20010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015882: L-ascorbic acid transport	0.00E+00
2	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
3	GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process	0.00E+00
4	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
5	GO:0017038: protein import	0.00E+00
6	GO:0090279: regulation of calcium ion import	0.00E+00
7	GO:0030155: regulation of cell adhesion	0.00E+00
8	GO:0042820: vitamin B6 catabolic process	0.00E+00
9	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
10	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
11	GO:0018131: oxazole or thiazole biosynthetic process	0.00E+00
12	GO:1905177: tracheary element differentiation	0.00E+00
13	GO:1902326: positive regulation of chlorophyll biosynthetic process	0.00E+00
14	GO:0008298: intracellular mRNA localization	0.00E+00
15	GO:0042821: pyridoxal biosynthetic process	0.00E+00
16	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
17	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
18	GO:0071474: cellular hyperosmotic response	0.00E+00
19	GO:0015979: photosynthesis	1.13E-07
20	GO:0010027: thylakoid membrane organization	1.15E-06
21	GO:1901259: chloroplast rRNA processing	1.29E-05
22	GO:0015995: chlorophyll biosynthetic process	3.18E-05
23	GO:0005977: glycogen metabolic process	3.92E-05
24	GO:0071482: cellular response to light stimulus	4.22E-05
25	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	8.39E-05
26	GO:0010239: chloroplast mRNA processing	8.39E-05
27	GO:2001141: regulation of RNA biosynthetic process	8.39E-05
28	GO:0009773: photosynthetic electron transport in photosystem I	1.20E-04
29	GO:0009658: chloroplast organization	1.32E-04
30	GO:0009765: photosynthesis, light harvesting	1.45E-04
31	GO:0006021: inositol biosynthetic process	1.45E-04
32	GO:0010021: amylopectin biosynthetic process	1.45E-04
33	GO:0009767: photosynthetic electron transport chain	1.78E-04
34	GO:0010207: photosystem II assembly	2.13E-04
35	GO:0045038: protein import into chloroplast thylakoid membrane	2.22E-04
36	GO:0009228: thiamine biosynthetic process	3.14E-04
37	GO:0055114: oxidation-reduction process	3.29E-04
38	GO:0010189: vitamin E biosynthetic process	4.19E-04
39	GO:0071461: cellular response to redox state	5.15E-04
40	GO:0051775: response to redox state	5.15E-04
41	GO:0051247: positive regulation of protein metabolic process	5.15E-04
42	GO:1902458: positive regulation of stomatal opening	5.15E-04
43	GO:0010028: xanthophyll cycle	5.15E-04
44	GO:0034337: RNA folding	5.15E-04
45	GO:2000905: negative regulation of starch metabolic process	5.15E-04
46	GO:0000476: maturation of 4.5S rRNA	5.15E-04
47	GO:0005991: trehalose metabolic process	5.15E-04
48	GO:0009443: pyridoxal 5'-phosphate salvage	5.15E-04
49	GO:0000967: rRNA 5'-end processing	5.15E-04
50	GO:0000305: response to oxygen radical	5.15E-04
51	GO:0031426: polycistronic mRNA processing	5.15E-04
52	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	5.15E-04
53	GO:0000481: maturation of 5S rRNA	5.15E-04
54	GO:0006659: phosphatidylserine biosynthetic process	5.15E-04
55	GO:0042371: vitamin K biosynthetic process	5.15E-04
56	GO:0006605: protein targeting	6.69E-04
57	GO:0032544: plastid translation	8.15E-04
58	GO:0009657: plastid organization	8.15E-04
59	GO:0009958: positive gravitropism	8.23E-04
60	GO:0009791: post-embryonic development	9.85E-04
61	GO:0019252: starch biosynthetic process	9.85E-04
62	GO:0071457: cellular response to ozone	1.11E-03
63	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.11E-03
64	GO:0051262: protein tetramerization	1.11E-03
65	GO:0034470: ncRNA processing	1.11E-03
66	GO:0080005: photosystem stoichiometry adjustment	1.11E-03
67	GO:0010541: acropetal auxin transport	1.11E-03
68	GO:0018026: peptidyl-lysine monomethylation	1.11E-03
69	GO:0060151: peroxisome localization	1.11E-03
70	GO:0051645: Golgi localization	1.11E-03
71	GO:0060359: response to ammonium ion	1.11E-03
72	GO:1904143: positive regulation of carotenoid biosynthetic process	1.11E-03
73	GO:0032502: developmental process	1.16E-03
74	GO:0005975: carbohydrate metabolic process	1.31E-03
75	GO:0019684: photosynthesis, light reaction	1.55E-03
76	GO:0043085: positive regulation of catalytic activity	1.55E-03
77	GO:0006352: DNA-templated transcription, initiation	1.55E-03
78	GO:0051646: mitochondrion localization	1.81E-03
79	GO:0010160: formation of animal organ boundary	1.81E-03
80	GO:0043157: response to cation stress	1.81E-03
81	GO:0072661: protein targeting to plasma membrane	1.81E-03
82	GO:0048586: regulation of long-day photoperiodism, flowering	1.81E-03
83	GO:0006954: inflammatory response	1.81E-03
84	GO:0090391: granum assembly	1.81E-03
85	GO:0048281: inflorescence morphogenesis	1.81E-03
86	GO:0090436: leaf pavement cell development	1.81E-03
87	GO:0010623: programmed cell death involved in cell development	1.81E-03
88	GO:0009416: response to light stimulus	2.03E-03
89	GO:0048467: gynoecium development	2.27E-03
90	GO:0018298: protein-chromophore linkage	2.40E-03
91	GO:0019853: L-ascorbic acid biosynthetic process	2.55E-03
92	GO:0009409: response to cold	2.61E-03
93	GO:0016556: mRNA modification	2.63E-03
94	GO:0071484: cellular response to light intensity	2.63E-03
95	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.63E-03
96	GO:0009226: nucleotide-sugar biosynthetic process	2.63E-03
97	GO:0009152: purine ribonucleotide biosynthetic process	2.63E-03
98	GO:0046653: tetrahydrofolate metabolic process	2.63E-03
99	GO:0006107: oxaloacetate metabolic process	2.63E-03
100	GO:0046739: transport of virus in multicellular host	2.63E-03
101	GO:0043481: anthocyanin accumulation in tissues in response to UV light	2.63E-03
102	GO:0043572: plastid fission	2.63E-03
103	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	2.63E-03
104	GO:0010148: transpiration	2.63E-03
105	GO:0048527: lateral root development	2.90E-03
106	GO:0006749: glutathione metabolic process	3.54E-03
107	GO:0010109: regulation of photosynthesis	3.54E-03
108	GO:0010107: potassium ion import	3.54E-03
109	GO:0071486: cellular response to high light intensity	3.54E-03
110	GO:2000122: negative regulation of stomatal complex development	3.54E-03
111	GO:0006546: glycine catabolic process	3.54E-03
112	GO:2000306: positive regulation of photomorphogenesis	3.54E-03
113	GO:0006109: regulation of carbohydrate metabolic process	3.54E-03
114	GO:0006734: NADH metabolic process	3.54E-03
115	GO:0022622: root system development	3.54E-03
116	GO:0010508: positive regulation of autophagy	3.54E-03
117	GO:0030245: cellulose catabolic process	4.20E-03
118	GO:0010114: response to red light	4.51E-03
119	GO:0043097: pyrimidine nucleoside salvage	4.54E-03
120	GO:0009107: lipoate biosynthetic process	4.54E-03
121	GO:0080110: sporopollenin biosynthetic process	4.54E-03
122	GO:0006465: signal peptide processing	4.54E-03
123	GO:0098719: sodium ion import across plasma membrane	4.54E-03
124	GO:0010375: stomatal complex patterning	4.54E-03
125	GO:0006564: L-serine biosynthetic process	4.54E-03
126	GO:0010236: plastoquinone biosynthetic process	4.54E-03
127	GO:0071493: cellular response to UV-B	4.54E-03
128	GO:0032973: amino acid export	5.63E-03
129	GO:0000741: karyogamy	5.63E-03
130	GO:0046855: inositol phosphate dephosphorylation	5.63E-03
131	GO:0006751: glutathione catabolic process	5.63E-03
132	GO:0042549: photosystem II stabilization	5.63E-03
133	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	5.63E-03
134	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	5.63E-03
135	GO:0060918: auxin transport	5.63E-03
136	GO:0009959: negative gravitropism	5.63E-03
137	GO:0050665: hydrogen peroxide biosynthetic process	5.63E-03
138	GO:0006206: pyrimidine nucleobase metabolic process	5.63E-03
139	GO:0010182: sugar mediated signaling pathway	6.31E-03
140	GO:0009646: response to absence of light	6.78E-03
141	GO:0009854: oxidative photosynthetic carbon pathway	6.79E-03
142	GO:0010019: chloroplast-nucleus signaling pathway	6.79E-03
143	GO:0080086: stamen filament development	6.79E-03
144	GO:0009955: adaxial/abaxial pattern specification	6.79E-03
145	GO:0048280: vesicle fusion with Golgi apparatus	6.79E-03
146	GO:0008654: phospholipid biosynthetic process	7.28E-03
147	GO:0009769: photosynthesis, light harvesting in photosystem II	8.04E-03
148	GO:0010103: stomatal complex morphogenesis	8.04E-03
149	GO:0032880: regulation of protein localization	8.04E-03
150	GO:0010374: stomatal complex development	8.04E-03
151	GO:0070370: cellular heat acclimation	8.04E-03
152	GO:0009772: photosynthetic electron transport in photosystem II	8.04E-03
153	GO:0043090: amino acid import	8.04E-03
154	GO:0009645: response to low light intensity stimulus	8.04E-03
155	GO:0010444: guard mother cell differentiation	8.04E-03
156	GO:0006400: tRNA modification	8.04E-03
157	GO:0006810: transport	8.41E-03
158	GO:0010090: trichome morphogenesis	8.90E-03
159	GO:0046620: regulation of organ growth	9.36E-03
160	GO:0055075: potassium ion homeostasis	9.36E-03
161	GO:0070413: trehalose metabolism in response to stress	9.36E-03
162	GO:0007155: cell adhesion	9.36E-03
163	GO:0048564: photosystem I assembly	9.36E-03
164	GO:0009690: cytokinin metabolic process	9.36E-03
165	GO:0010078: maintenance of root meristem identity	9.36E-03
166	GO:0032508: DNA duplex unwinding	9.36E-03
167	GO:2000070: regulation of response to water deprivation	9.36E-03
168	GO:0043562: cellular response to nitrogen levels	1.08E-02
169	GO:0017004: cytochrome complex assembly	1.08E-02
170	GO:0001558: regulation of cell growth	1.08E-02
171	GO:0019430: removal of superoxide radicals	1.08E-02
172	GO:0015996: chlorophyll catabolic process	1.08E-02
173	GO:0010052: guard cell differentiation	1.08E-02
174	GO:0010204: defense response signaling pathway, resistance gene-independent	1.08E-02
175	GO:0007186: G-protein coupled receptor signaling pathway	1.08E-02
176	GO:0010497: plasmodesmata-mediated intercellular transport	1.08E-02
177	GO:0048507: meristem development	1.22E-02
178	GO:0098656: anion transmembrane transport	1.22E-02
179	GO:0080144: amino acid homeostasis	1.22E-02
180	GO:0090333: regulation of stomatal closure	1.22E-02
181	GO:0046916: cellular transition metal ion homeostasis	1.22E-02
182	GO:0009051: pentose-phosphate shunt, oxidative branch	1.22E-02
183	GO:0006754: ATP biosynthetic process	1.22E-02
184	GO:0009627: systemic acquired resistance	1.27E-02
185	GO:0080167: response to karrikin	1.35E-02
186	GO:0051453: regulation of intracellular pH	1.38E-02
187	GO:0009638: phototropism	1.38E-02
188	GO:0006779: porphyrin-containing compound biosynthetic process	1.38E-02
189	GO:0045036: protein targeting to chloroplast	1.54E-02
190	GO:0006949: syncytium formation	1.54E-02
191	GO:0006896: Golgi to vacuole transport	1.54E-02
192	GO:0006782: protoporphyrinogen IX biosynthetic process	1.54E-02
193	GO:0010218: response to far red light	1.64E-02
194	GO:0009684: indoleacetic acid biosynthetic process	1.70E-02
195	GO:0009089: lysine biosynthetic process via diaminopimelate	1.70E-02
196	GO:0018119: peptidyl-cysteine S-nitrosylation	1.70E-02
197	GO:0045037: protein import into chloroplast stroma	1.88E-02
198	GO:0009637: response to blue light	1.88E-02
199	GO:0008361: regulation of cell size	1.88E-02
200	GO:0006790: sulfur compound metabolic process	1.88E-02
201	GO:0016024: CDP-diacylglycerol biosynthetic process	1.88E-02
202	GO:0050826: response to freezing	2.05E-02
203	GO:0009718: anthocyanin-containing compound biosynthetic process	2.05E-02
204	GO:0030048: actin filament-based movement	2.05E-02
205	GO:0010628: positive regulation of gene expression	2.05E-02
206	GO:0010588: cotyledon vascular tissue pattern formation	2.05E-02
207	GO:2000012: regulation of auxin polar transport	2.05E-02
208	GO:0006108: malate metabolic process	2.05E-02
209	GO:0045490: pectin catabolic process	2.08E-02
210	GO:0019253: reductive pentose-phosphate cycle	2.24E-02
211	GO:0010540: basipetal auxin transport	2.24E-02
212	GO:0010143: cutin biosynthetic process	2.24E-02
213	GO:0010020: chloroplast fission	2.24E-02
214	GO:0046854: phosphatidylinositol phosphorylation	2.43E-02
215	GO:0009926: auxin polar transport	2.43E-02
216	GO:0010030: positive regulation of seed germination	2.43E-02
217	GO:0009644: response to high light intensity	2.63E-02
218	GO:0005992: trehalose biosynthetic process	2.83E-02
219	GO:0009944: polarity specification of adaxial/abaxial axis	2.83E-02
220	GO:0055085: transmembrane transport	2.92E-02
221	GO:0007017: microtubule-based process	3.03E-02
222	GO:0051302: regulation of cell division	3.03E-02
223	GO:0009768: photosynthesis, light harvesting in photosystem I	3.03E-02
224	GO:0009664: plant-type cell wall organization	3.06E-02
225	GO:0010431: seed maturation	3.24E-02
226	GO:0019915: lipid storage	3.24E-02
227	GO:0061077: chaperone-mediated protein folding	3.24E-02
228	GO:0016114: terpenoid biosynthetic process	3.24E-02
229	GO:0009269: response to desiccation	3.24E-02
230	GO:0051603: proteolysis involved in cellular protein catabolic process	3.39E-02
231	GO:0006730: one-carbon metabolic process	3.46E-02
232	GO:0019748: secondary metabolic process	3.46E-02
233	GO:0001944: vasculature development	3.68E-02
234	GO:0006012: galactose metabolic process	3.68E-02
235	GO:0009686: gibberellin biosynthetic process	3.68E-02
236	GO:0019722: calcium-mediated signaling	3.90E-02
237	GO:0009561: megagametogenesis	3.90E-02
238	GO:0010089: xylem development	3.90E-02
239	GO:0010584: pollen exine formation	3.90E-02
240	GO:0048443: stamen development	3.90E-02
241	GO:0009306: protein secretion	3.90E-02
242	GO:0048367: shoot system development	4.00E-02
243	GO:0008284: positive regulation of cell proliferation	4.13E-02
244	GO:0016117: carotenoid biosynthetic process	4.13E-02
245	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	4.13E-02
246	GO:0042147: retrograde transport, endosome to Golgi	4.13E-02
247	GO:0010087: phloem or xylem histogenesis	4.37E-02
248	GO:0010118: stomatal movement	4.37E-02
249	GO:0042631: cellular response to water deprivation	4.37E-02
250	GO:0080022: primary root development	4.37E-02
251	GO:0009741: response to brassinosteroid	4.61E-02
252	GO:0006885: regulation of pH	4.61E-02
253	GO:0010268: brassinosteroid homeostasis	4.61E-02
254	GO:0006520: cellular amino acid metabolic process	4.61E-02
255	GO:0006662: glycerol ether metabolic process	4.61E-02
256	GO:0071472: cellular response to salt stress	4.61E-02
257	GO:0010197: polar nucleus fusion	4.61E-02
258	GO:0010154: fruit development	4.61E-02
259	GO:0006814: sodium ion transport	4.85E-02
260	GO:0015986: ATP synthesis coupled proton transport	4.85E-02
261	GO:0009742: brassinosteroid mediated signaling pathway	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
2	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
3	GO:0036361: racemase activity, acting on amino acids and derivatives	0.00E+00
4	GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity	0.00E+00
5	GO:0010276: phytol kinase activity	0.00E+00
6	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
7	GO:0008974: phosphoribulokinase activity	0.00E+00
8	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
9	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
10	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
11	GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives	0.00E+00
12	GO:0019156: isoamylase activity	1.16E-05
13	GO:0019899: enzyme binding	2.03E-05
14	GO:0043495: protein anchor	1.45E-04
15	GO:0001053: plastid sigma factor activity	1.45E-04
16	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.45E-04
17	GO:0016987: sigma factor activity	1.45E-04
18	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.22E-04
19	GO:0016491: oxidoreductase activity	3.06E-04
20	GO:0004556: alpha-amylase activity	3.14E-04
21	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	4.19E-04
22	GO:0010347: L-galactose-1-phosphate phosphatase activity	5.15E-04
23	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	5.15E-04
24	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	5.15E-04
25	GO:0051777: ent-kaurenoate oxidase activity	5.15E-04
26	GO:0046906: tetrapyrrole binding	5.15E-04
27	GO:0004856: xylulokinase activity	5.15E-04
28	GO:0005227: calcium activated cation channel activity	5.15E-04
29	GO:0005080: protein kinase C binding	5.15E-04
30	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	5.15E-04
31	GO:0008746: NAD(P)+ transhydrogenase activity	5.15E-04
32	GO:0004328: formamidase activity	5.15E-04
33	GO:0030570: pectate lyase activity	5.49E-04
34	GO:0004033: aldo-keto reductase (NADP) activity	6.69E-04
35	GO:0048038: quinone binding	1.07E-03
36	GO:0004362: glutathione-disulfide reductase activity	1.11E-03
37	GO:0004512: inositol-3-phosphate synthase activity	1.11E-03
38	GO:0003839: gamma-glutamylcyclotransferase activity	1.11E-03
39	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.11E-03
40	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	1.11E-03
41	GO:0004617: phosphoglycerate dehydrogenase activity	1.11E-03
42	GO:0004047: aminomethyltransferase activity	1.11E-03
43	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	1.11E-03
44	GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity	1.11E-03
45	GO:0052832: inositol monophosphate 3-phosphatase activity	1.11E-03
46	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	1.11E-03
47	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	1.11E-03
48	GO:0008934: inositol monophosphate 1-phosphatase activity	1.11E-03
49	GO:0052833: inositol monophosphate 4-phosphatase activity	1.11E-03
50	GO:0042802: identical protein binding	1.76E-03
51	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	1.81E-03
52	GO:0070402: NADPH binding	1.81E-03
53	GO:0008864: formyltetrahydrofolate deformylase activity	1.81E-03
54	GO:0015462: ATPase-coupled protein transmembrane transporter activity	1.81E-03
55	GO:0004751: ribose-5-phosphate isomerase activity	1.81E-03
56	GO:0016992: lipoate synthase activity	1.81E-03
57	GO:0016168: chlorophyll binding	1.84E-03
58	GO:0016851: magnesium chelatase activity	2.63E-03
59	GO:0017057: 6-phosphogluconolactonase activity	2.63E-03
60	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	2.63E-03
61	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	2.63E-03
62	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	2.63E-03
63	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	2.63E-03
64	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	2.63E-03
65	GO:0048027: mRNA 5'-UTR binding	2.63E-03
66	GO:0019843: rRNA binding	3.06E-03
67	GO:0005528: FK506 binding	3.16E-03
68	GO:0016829: lyase activity	3.45E-03
69	GO:0016279: protein-lysine N-methyltransferase activity	3.54E-03
70	GO:0045430: chalcone isomerase activity	3.54E-03
71	GO:0009011: starch synthase activity	3.54E-03
72	GO:0004045: aminoacyl-tRNA hydrolase activity	3.54E-03
73	GO:0042277: peptide binding	3.54E-03
74	GO:0008891: glycolate oxidase activity	3.54E-03
75	GO:0019199: transmembrane receptor protein kinase activity	3.54E-03
76	GO:0003824: catalytic activity	4.25E-03
77	GO:0004185: serine-type carboxypeptidase activity	4.51E-03
78	GO:0016846: carbon-sulfur lyase activity	4.54E-03
79	GO:0022891: substrate-specific transmembrane transporter activity	4.58E-03
80	GO:0008810: cellulase activity	4.58E-03
81	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	5.49E-03
82	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	5.63E-03
83	GO:0004784: superoxide dismutase activity	5.63E-03
84	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	5.63E-03
85	GO:0008200: ion channel inhibitor activity	5.63E-03
86	GO:0004605: phosphatidate cytidylyltransferase activity	5.63E-03
87	GO:0004462: lactoylglutathione lyase activity	5.63E-03
88	GO:0015081: sodium ion transmembrane transporter activity	5.63E-03
89	GO:0016615: malate dehydrogenase activity	5.63E-03
90	GO:0030060: L-malate dehydrogenase activity	6.79E-03
91	GO:0005261: cation channel activity	6.79E-03
92	GO:0004849: uridine kinase activity	6.79E-03
93	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	6.79E-03
94	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	6.79E-03
95	GO:0016791: phosphatase activity	9.47E-03
96	GO:0008483: transaminase activity	1.01E-02
97	GO:0016597: amino acid binding	1.07E-02
98	GO:0046914: transition metal ion binding	1.08E-02
99	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.22E-02
100	GO:0030955: potassium ion binding	1.38E-02
101	GO:0004743: pyruvate kinase activity	1.38E-02
102	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.48E-02
103	GO:0008047: enzyme activator activity	1.54E-02
104	GO:0015020: glucuronosyltransferase activity	1.54E-02
105	GO:0052689: carboxylic ester hydrolase activity	1.57E-02
106	GO:0004222: metalloendopeptidase activity	1.64E-02
107	GO:0008559: xenobiotic-transporting ATPase activity	1.70E-02
108	GO:0047372: acylglycerol lipase activity	1.70E-02
109	GO:0015386: potassium:proton antiporter activity	1.70E-02
110	GO:0008378: galactosyltransferase activity	1.88E-02
111	GO:0004871: signal transducer activity	1.90E-02
112	GO:0003993: acid phosphatase activity	1.97E-02
113	GO:0031072: heat shock protein binding	2.05E-02
114	GO:0003725: double-stranded RNA binding	2.05E-02
115	GO:0004565: beta-galactosidase activity	2.05E-02
116	GO:0005315: inorganic phosphate transmembrane transporter activity	2.05E-02
117	GO:0010329: auxin efflux transmembrane transporter activity	2.05E-02
118	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.06E-02
119	GO:0005509: calcium ion binding	2.15E-02
120	GO:0008083: growth factor activity	2.24E-02
121	GO:0003774: motor activity	2.24E-02
122	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.24E-02
123	GO:0003924: GTPase activity	2.42E-02
124	GO:0031409: pigment binding	2.62E-02
125	GO:0035091: phosphatidylinositol binding	2.63E-02
126	GO:0004857: enzyme inhibitor activity	2.83E-02
127	GO:0004176: ATP-dependent peptidase activity	3.24E-02
128	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.28E-02
129	GO:0016788: hydrolase activity, acting on ester bonds	3.68E-02
130	GO:0003727: single-stranded RNA binding	3.90E-02
131	GO:0008514: organic anion transmembrane transporter activity	3.90E-02
132	GO:0047134: protein-disulfide reductase activity	4.13E-02
133	GO:0005525: GTP binding	4.47E-02
134	GO:0016887: ATPase activity	4.58E-02
135	GO:0008080: N-acetyltransferase activity	4.61E-02
136	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	4.61E-02
137	GO:0010181: FMN binding	4.85E-02
138	GO:0004791: thioredoxin-disulfide reductase activity	4.85E-02
139	GO:0050662: coenzyme binding	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009344: nitrite reductase complex [NAD(P)H]	0.00E+00
3	GO:0009507: chloroplast	3.55E-34
4	GO:0009535: chloroplast thylakoid membrane	3.15E-18
5	GO:0009570: chloroplast stroma	3.09E-17
6	GO:0009941: chloroplast envelope	1.27E-11
7	GO:0009543: chloroplast thylakoid lumen	1.54E-11
8	GO:0009579: thylakoid	4.97E-11
9	GO:0009654: photosystem II oxygen evolving complex	2.28E-08
10	GO:0009534: chloroplast thylakoid	4.33E-08
11	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.38E-06
12	GO:0019898: extrinsic component of membrane	7.04E-06
13	GO:0010319: stromule	1.60E-05
14	GO:0031977: thylakoid lumen	1.01E-04
15	GO:0009523: photosystem II	1.11E-04
16	GO:0030095: chloroplast photosystem II	2.13E-04
17	GO:0005787: signal peptidase complex	5.15E-04
18	GO:0031969: chloroplast membrane	9.55E-04
19	GO:0042644: chloroplast nucleoid	9.74E-04
20	GO:0080085: signal recognition particle, chloroplast targeting	1.11E-03
21	GO:0009528: plastid inner membrane	1.81E-03
22	GO:0010007: magnesium chelatase complex	1.81E-03
23	GO:0009706: chloroplast inner membrane	2.17E-03
24	GO:0015630: microtubule cytoskeleton	2.63E-03
25	GO:0042646: plastid nucleoid	2.63E-03
26	GO:0042651: thylakoid membrane	3.49E-03
27	GO:0009527: plastid outer membrane	3.54E-03
28	GO:0009517: PSII associated light-harvesting complex II	3.54E-03
29	GO:0005773: vacuole	3.93E-03
30	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	5.63E-03
31	GO:0048046: apoplast	6.25E-03
32	GO:0009522: photosystem I	6.78E-03
33	GO:0005618: cell wall	7.98E-03
34	GO:0012507: ER to Golgi transport vesicle membrane	9.36E-03
35	GO:0009539: photosystem II reaction center	1.08E-02
36	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.08E-02
37	GO:0005886: plasma membrane	1.08E-02
38	GO:0005763: mitochondrial small ribosomal subunit	1.22E-02
39	GO:0005623: cell	1.43E-02
40	GO:0009707: chloroplast outer membrane	1.48E-02
41	GO:0016459: myosin complex	1.54E-02
42	GO:0016020: membrane	1.61E-02
43	GO:0032040: small-subunit processome	1.88E-02
44	GO:0030076: light-harvesting complex	2.43E-02
45	GO:0005840: ribosome	2.73E-02
46	GO:0009532: plastid stroma	3.24E-02
47	GO:0016021: integral component of membrane	3.55E-02
48	GO:0009505: plant-type cell wall	3.79E-02
49	GO:0005576: extracellular region	3.96E-02