Gene: AT1G12800
Gene description
TAIR ID: AT1G12800
Short description: Nucleic acid-binding, OB-fold-like protein
Pathogen responsiveness: 0.10
General responsiveness: 1.50
GO biological process
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA), chloroplast rRNA processing, maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, RNA folding
GO cellular component
nucleolus, chloroplast, ribosome, small-subunit processome
GO molecular function
unkown
Protein domain
| Pfam | PF00829, Ribosomal prokaryotic L21 protein |
| Pfam | PF00575, S1 RNA binding domain |
| SMART | SM00316, S1 |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
18 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE17500 | Col, 35S:AFB1, control 0 h | Col, 35S:AFB1, PstDC3000 24 h | -1.66 | 6.09E-04 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | -1.65 | 4.30E-04 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | -1.78 | 3.03E-04 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | -2.71 | 5.00E-11 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -3.20 | 2.00E-15 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | -2.01 | 1.22E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | -3.25 | 1.62E-15 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | -2.00 | 1.26E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | -2.88 | 6.27E-15 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | -1.59 | 4.53E-09 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | -2.80 | 6.54E-04 |
| GSE5520 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | -2.50 | 2.86E-04 |
| GSE56094 | Col, WT, control 10 h | Col, WT, PstDC3000 10 h | -1.91 | 1.31E-10 |
| GSE56094 | Col, WT, control 11 h | Col, WT, PstDC3000 11 h | -2.12 | 6.48E-12 |
| GSE56094 | Col, WT, control 9 h | Col, WT, PstDC3000 9 h | -1.50 | 5.12E-07 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | -1.57 | 4.97E-03 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h | -1.90 | 3.40E-03 |
| GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 6 h | -1.54 | 1.24E-02 |
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