gene detail

Gene description

TAIR ID: AT1G12460

Short description: Leucine-rich repeat protein kinase family protein

Pathogen responsiveness: -1.04

General responsiveness: -1.44

Orthologous

Rice:

OS03G0127700

Maize:

GRMZM2G371137

Wheat: No orthologous gene

GO biological process

protein phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway

GO cellular component

plasma membrane, integral component of membrane

GO molecular function

protein serine/threonine kinase activity, ATP binding, protein kinase activity, kinase activity

Protein domain

Pfam	PF08263, Leucine rich repeat N-terminal domain
Pfam	PF00069, Protein kinase domain
SMART	SM00369, LRR_TYP

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260, AT2G43010, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.72	1.13E-02
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-2.58	2.15E-05
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-1.69	1.05E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-2.86	8.00E-06
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	-1.50	6.38E-03
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.58	5.87E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.54	3.47E-10