co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G12460

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010046: response to mycotoxin	0.00E+00
2	GO:0019593: mannitol biosynthetic process	0.00E+00
3	GO:0080050: regulation of seed development	0.00E+00
4	GO:0042353: fucose biosynthetic process	0.00E+00
5	GO:0032497: detection of lipopolysaccharide	0.00E+00
6	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
7	GO:0006468: protein phosphorylation	2.27E-05
8	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	6.22E-05
9	GO:2000070: regulation of response to water deprivation	8.08E-05
10	GO:0034620: cellular response to unfolded protein	1.25E-04
11	GO:0090421: embryonic meristem initiation	1.25E-04
12	GO:0009865: pollen tube adhesion	1.25E-04
13	GO:0010289: homogalacturonan biosynthetic process	2.90E-04
14	GO:2000030: regulation of response to red or far red light	2.90E-04
15	GO:0007130: synaptonemal complex assembly	2.90E-04
16	GO:0006898: receptor-mediated endocytosis	2.90E-04
17	GO:0009863: salicylic acid mediated signaling pathway	4.36E-04
18	GO:0045793: positive regulation of cell size	4.78E-04
19	GO:0090630: activation of GTPase activity	4.78E-04
20	GO:0010325: raffinose family oligosaccharide biosynthetic process	4.78E-04
21	GO:0080168: abscisic acid transport	4.78E-04
22	GO:0016045: detection of bacterium	4.78E-04
23	GO:0010359: regulation of anion channel activity	4.78E-04
24	GO:0009611: response to wounding	5.57E-04
25	GO:0010200: response to chitin	6.33E-04
26	GO:0030100: regulation of endocytosis	6.85E-04
27	GO:0009399: nitrogen fixation	6.85E-04
28	GO:0033014: tetrapyrrole biosynthetic process	6.85E-04
29	GO:0015696: ammonium transport	6.85E-04
30	GO:0016310: phosphorylation	7.32E-04
31	GO:0045489: pectin biosynthetic process	8.52E-04
32	GO:1902347: response to strigolactone	9.08E-04
33	GO:0009694: jasmonic acid metabolic process	9.08E-04
34	GO:0072488: ammonium transmembrane transport	9.08E-04
35	GO:0006536: glutamate metabolic process	9.08E-04
36	GO:0042991: transcription factor import into nucleus	9.08E-04
37	GO:0048544: recognition of pollen	9.12E-04
38	GO:0010193: response to ozone	1.04E-03
39	GO:0045038: protein import into chloroplast thylakoid membrane	1.15E-03
40	GO:0048497: maintenance of floral organ identity	1.15E-03
41	GO:0006665: sphingolipid metabolic process	1.15E-03
42	GO:0006873: cellular ion homeostasis	1.15E-03
43	GO:0010256: endomembrane system organization	1.41E-03
44	GO:0047484: regulation of response to osmotic stress	1.41E-03
45	GO:0080113: regulation of seed growth	1.68E-03
46	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.68E-03
47	GO:1901001: negative regulation of response to salt stress	1.68E-03
48	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.68E-03
49	GO:0007166: cell surface receptor signaling pathway	1.82E-03
50	GO:0006955: immune response	1.98E-03
51	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.98E-03
52	GO:0007155: cell adhesion	2.29E-03
53	GO:1900150: regulation of defense response to fungus	2.29E-03
54	GO:0045087: innate immune response	2.43E-03
55	GO:0009880: embryonic pattern specification	2.61E-03
56	GO:0009827: plant-type cell wall modification	2.61E-03
57	GO:0006997: nucleus organization	2.61E-03
58	GO:0006783: heme biosynthetic process	2.95E-03
59	GO:0001708: cell fate specification	2.95E-03
60	GO:0098656: anion transmembrane transport	2.95E-03
61	GO:0006779: porphyrin-containing compound biosynthetic process	3.31E-03
62	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.66E-03
63	GO:0048829: root cap development	3.68E-03
64	GO:0006782: protoporphyrinogen IX biosynthetic process	3.68E-03
65	GO:0019538: protein metabolic process	3.68E-03
66	GO:0046777: protein autophosphorylation	3.82E-03
67	GO:0010015: root morphogenesis	4.06E-03
68	GO:0052544: defense response by callose deposition in cell wall	4.06E-03
69	GO:0006952: defense response	4.33E-03
70	GO:0071365: cellular response to auxin stimulus	4.45E-03
71	GO:0010105: negative regulation of ethylene-activated signaling pathway	4.45E-03
72	GO:0055046: microgametogenesis	4.86E-03
73	GO:0005986: sucrose biosynthetic process	4.86E-03
74	GO:0048467: gynoecium development	5.28E-03
75	GO:0034605: cellular response to heat	5.28E-03
76	GO:0009620: response to fungus	5.44E-03
77	GO:0070588: calcium ion transmembrane transport	5.71E-03
78	GO:0009969: xyloglucan biosynthetic process	5.71E-03
79	GO:0071732: cellular response to nitric oxide	5.71E-03
80	GO:0009624: response to nematode	5.96E-03
81	GO:2000377: regulation of reactive oxygen species metabolic process	6.61E-03
82	GO:0009737: response to abscisic acid	6.91E-03
83	GO:0009695: jasmonic acid biosynthetic process	7.08E-03
84	GO:0031408: oxylipin biosynthetic process	7.56E-03
85	GO:0009873: ethylene-activated signaling pathway	7.96E-03
86	GO:0031348: negative regulation of defense response	8.05E-03
87	GO:0071456: cellular response to hypoxia	8.05E-03
88	GO:0030245: cellulose catabolic process	8.05E-03
89	GO:0010017: red or far-red light signaling pathway	8.05E-03
90	GO:0030433: ubiquitin-dependent ERAD pathway	8.05E-03
91	GO:0071369: cellular response to ethylene stimulus	8.56E-03
92	GO:0010089: xylem development	9.07E-03
93	GO:0048443: stamen development	9.07E-03
94	GO:0006817: phosphate ion transport	9.07E-03
95	GO:0000271: polysaccharide biosynthetic process	1.01E-02
96	GO:0048868: pollen tube development	1.07E-02
97	GO:0009960: endosperm development	1.07E-02
98	GO:1901657: glycosyl compound metabolic process	1.36E-02
99	GO:0071281: cellular response to iron ion	1.36E-02
100	GO:0010286: heat acclimation	1.48E-02
101	GO:0006904: vesicle docking involved in exocytosis	1.48E-02
102	GO:0001666: response to hypoxia	1.61E-02
103	GO:0009627: systemic acquired resistance	1.74E-02
104	GO:0015995: chlorophyll biosynthetic process	1.81E-02
105	GO:0048366: leaf development	1.88E-02
106	GO:0048481: plant ovule development	1.94E-02
107	GO:0030244: cellulose biosynthetic process	1.94E-02
108	GO:0010311: lateral root formation	2.01E-02
109	GO:0009834: plant-type secondary cell wall biogenesis	2.08E-02
110	GO:0006811: ion transport	2.08E-02
111	GO:0010119: regulation of stomatal movement	2.15E-02
112	GO:0007165: signal transduction	2.26E-02
113	GO:0016051: carbohydrate biosynthetic process	2.30E-02
114	GO:0006887: exocytosis	2.60E-02
115	GO:0006897: endocytosis	2.60E-02
116	GO:0042542: response to hydrogen peroxide	2.68E-02
117	GO:0009640: photomorphogenesis	2.75E-02
118	GO:0071555: cell wall organization	2.90E-02
119	GO:0009644: response to high light intensity	2.91E-02
120	GO:0048364: root development	3.06E-02
121	GO:0006855: drug transmembrane transport	3.07E-02
122	GO:0009753: response to jasmonic acid	3.14E-02
123	GO:0009846: pollen germination	3.24E-02
124	GO:0009585: red, far-red light phototransduction	3.40E-02
125	GO:0009736: cytokinin-activated signaling pathway	3.40E-02
126	GO:0010224: response to UV-B	3.49E-02
127	GO:0043086: negative regulation of catalytic activity	3.83E-02
128	GO:0048367: shoot system development	3.92E-02
129	GO:0042545: cell wall modification	4.28E-02
130	GO:0018105: peptidyl-serine phosphorylation	4.47E-02
131	GO:0009742: brassinosteroid mediated signaling pathway	4.56E-02
132	GO:0005975: carbohydrate metabolic process	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0080123: jasmonate-amino synthetase activity	0.00E+00
2	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
3	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
4	GO:0070566: adenylyltransferase activity	0.00E+00
5	GO:0017048: Rho GTPase binding	0.00E+00
6	GO:0016301: kinase activity	9.89E-06
7	GO:0004674: protein serine/threonine kinase activity	8.25E-05
8	GO:0090440: abscisic acid transporter activity	1.25E-04
9	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	1.25E-04
10	GO:0005524: ATP binding	1.42E-04
11	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.90E-04
12	GO:0016629: 12-oxophytodienoate reductase activity	2.90E-04
13	GO:0004103: choline kinase activity	2.90E-04
14	GO:0008883: glutamyl-tRNA reductase activity	2.90E-04
15	GO:0017040: ceramidase activity	2.90E-04
16	GO:0004383: guanylate cyclase activity	4.78E-04
17	GO:0047274: galactinol-sucrose galactosyltransferase activity	4.78E-04
18	GO:0031625: ubiquitin protein ligase binding	5.72E-04
19	GO:0004351: glutamate decarboxylase activity	6.85E-04
20	GO:0001653: peptide receptor activity	6.85E-04
21	GO:0030246: carbohydrate binding	9.02E-04
22	GO:0043015: gamma-tubulin binding	9.08E-04
23	GO:0004356: glutamate-ammonia ligase activity	1.15E-03
24	GO:0009922: fatty acid elongase activity	1.15E-03
25	GO:0008519: ammonium transmembrane transporter activity	1.41E-03
26	GO:0051020: GTPase binding	1.68E-03
27	GO:0004143: diacylglycerol kinase activity	1.98E-03
28	GO:0019899: enzyme binding	1.98E-03
29	GO:0008308: voltage-gated anion channel activity	2.61E-03
30	GO:0003951: NAD+ kinase activity	2.61E-03
31	GO:0004672: protein kinase activity	3.61E-03
32	GO:0004713: protein tyrosine kinase activity	3.68E-03
33	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.91E-03
34	GO:0005315: inorganic phosphate transmembrane transporter activity	4.86E-03
35	GO:0005262: calcium channel activity	4.86E-03
36	GO:0019888: protein phosphatase regulator activity	4.86E-03
37	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	6.15E-03
38	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	6.15E-03
39	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	6.15E-03
40	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	8.05E-03
41	GO:0008514: organic anion transmembrane transporter activity	9.07E-03
42	GO:0010181: FMN binding	1.12E-02
43	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.31E-02
44	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.48E-02
45	GO:0016413: O-acetyltransferase activity	1.54E-02
46	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.74E-02
47	GO:0004683: calmodulin-dependent protein kinase activity	1.81E-02
48	GO:0102483: scopolin beta-glucosidase activity	1.81E-02
49	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.87E-02
50	GO:0005516: calmodulin binding	2.00E-02
51	GO:0005096: GTPase activator activity	2.01E-02
52	GO:0015238: drug transmembrane transporter activity	2.01E-02
53	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.15E-02
54	GO:0008422: beta-glucosidase activity	2.45E-02
55	GO:0050661: NADP binding	2.52E-02
56	GO:0043621: protein self-association	2.91E-02
57	GO:0035091: phosphatidylinositol binding	2.91E-02
58	GO:0043565: sequence-specific DNA binding	3.09E-02
59	GO:0045330: aspartyl esterase activity	3.66E-02
60	GO:0030599: pectinesterase activity	4.19E-02
61	GO:0003779: actin binding	4.28E-02

Rank	GO Term	Adjusted P value
1	GO:0070382: exocytic vesicle	1.25E-04
2	GO:0080085: signal recognition particle, chloroplast targeting	2.90E-04
3	GO:0005768: endosome	3.50E-04
4	GO:0045177: apical part of cell	6.85E-04
5	GO:0005886: plasma membrane	6.93E-04
6	GO:0000793: condensed chromosome	1.41E-03
7	GO:0030173: integral component of Golgi membrane	1.68E-03
8	GO:0000794: condensed nuclear chromosome	1.98E-03
9	GO:0016021: integral component of membrane	2.00E-03
10	GO:0031902: late endosome membrane	2.88E-03
11	GO:0016604: nuclear body	3.31E-03
12	GO:0000159: protein phosphatase type 2A complex	4.06E-03
13	GO:0005938: cell cortex	4.86E-03
14	GO:0010008: endosome membrane	5.11E-03
15	GO:0005802: trans-Golgi network	5.25E-03
16	GO:0005770: late endosome	1.07E-02
17	GO:0000145: exocyst	1.30E-02
18	GO:0032580: Golgi cisterna membrane	1.42E-02
19	GO:0005778: peroxisomal membrane	1.48E-02
20	GO:0090406: pollen tube	2.75E-02
21	GO:0005635: nuclear envelope	3.57E-02
22	GO:0009536: plastid	3.74E-02
23	GO:0000139: Golgi membrane	4.22E-02
24	GO:0012505: endomembrane system	4.28E-02
25	GO:0005794: Golgi apparatus	4.96E-02