Gene: AT1G12250
     


Gene description


TAIR ID: AT1G12250

Short description: Pentapeptide repeat-containing protein

Pathogen responsiveness: -0.40

General responsiveness: 1.96

Orthologous


Rice:

OS02G0643500   OS01G0144100  

Maize:

GRMZM2G315121  

Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


chloroplast thylakoid lumen, chloroplast, thylakoid, chloroplast thylakoid membrane, extracellular region, chloroplast thylakoid


GO molecular function


molecular_function


Protein domain


PfamPF00805, Pentapeptide repeats (8 copies)

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT2G47190

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


11 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, Flg22 2 h-1.631.72E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.981.24E-08
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-1.554.55E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.921.04E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.444.16E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.482.96E-14
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.424.66E-05
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.965.35E-05
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.776.51E-13
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.743.29E-12
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.972.39E-03






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