Gene description
TAIR ID: AT1G09340
Short description: chloroplast RNA binding
Pathogen responsiveness: 0.69
General responsiveness: 3.50
GO biological process
positive regulation of translation, monosaccharide metabolic process, positive regulation of transcription, DNA-templated, plastid translation, defense response to bacterium, cellular response to water deprivation, rRNA processing, regulation of gene expression, polysaccharide catabolic process, circadian rhythm, response to wounding, response to cold, chloroplast organization
GO cellular component
peroxisome, stromule, plastid-encoded plastid RNA polymerase complex, chloroplast stroma, plastoglobule, chloroplast, ribosome, chloroplast envelope, plasmodesma, Golgi apparatus, vacuole, apoplast, membrane
GO molecular function
RNA binding, catalytic activity, DNA binding, rRNA binding, protein binding, heteropolysaccharide binding, coenzyme binding
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
click to view PPI networkCoexpression network
Differentially expressed condition 
31 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE17500 | Col, 35S:AFB1, control 0 h | Col, 35S:AFB1, PstDC3000 24 h | -1.54 | 1.67E-04 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | -1.61 | 1.01E-04 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | -4.31 | 1.43E-10 |
| GSE37269 | Ei2, WT, control | Ei2, WT, TEV 21 d | -1.63 | 1.59E-02 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -2.75 | 7.40E-12 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | -1.65 | 1.51E-08 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | -3.21 | 9.22E-13 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | -1.76 | 5.96E-09 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | -2.88 | 3.53E-12 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | -3.03 | 1.09E-06 |
| GSE5520 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | -3.41 | 3.58E-09 |
| GSE56094 | Col, WT, control 10 h | Col, WT, PstDC3000 10 h | -4.00 | 2.52E-18 |
| GSE56094 | Col, WT, control 10 h | Col, WT, hrpA- 10 h | -2.33 | 1.30E-07 |
| GSE56094 | Col, WT, control 11 h | Col, WT, PstDC3000 11 h | -3.01 | 4.43E-12 |
| GSE56094 | Col, WT, control 11 h | Col, WT, hrpA- 11 h | -2.18 | 4.76E-07 |
| GSE56094 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | -3.09 | 1.57E-12 |
| GSE56094 | Col, WT, control 12 h | Col, WT, hrpA- 12 h | -1.71 | 1.47E-04 |
| GSE56094 | Col, WT, control 13 h | Col, WT, PstDC3000 13 h | -3.19 | 2.17E-13 |
| GSE56094 | Col, WT, control 13 h | Col, WT, hrpA- 13 h | -1.65 | 2.33E-04 |
| GSE56094 | Col, WT, control 6 h | Col, WT, PstDC3000 6 h | -2.05 | 2.77E-06 |
| GSE56094 | Col, WT, control 6 h | Col, WT, hrpA- 6 h | -1.56 | 6.30E-04 |
| GSE56094 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | -2.19 | 5.68E-07 |
| GSE56094 | Col, WT, control 7 h | Col, WT, hrpA- 7 h | -1.54 | 5.31E-04 |
| GSE56094 | Col, WT, control 8 h | Col, WT, PstDC3000 8 h | -2.81 | 9.42E-11 |
| GSE56094 | Col, WT, control 8 h | Col, WT, hrpA- 8 h | -2.51 | 1.67E-08 |
| GSE56094 | Col, WT, control 9 h | Col, WT, PstDC3000 9 h | -2.74 | 3.09E-10 |
| GSE56094 | Col, WT, control 9 h | Col, WT, hrpA- 9 h | -2.31 | 1.89E-07 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | -1.60 | 1.50E-03 |
| GSE6176 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | -2.25 | 3.27E-05 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h | -1.60 | 1.73E-02 |
| GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 6 h | -1.56 | 2.19E-02 |
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