Gene: AT5G58900
     

Gene description


TAIR ID: AT5G58900

Short description: Homeodomain-like transcriptional regulator

Pathogen responsiveness: -0.12

General responsiveness: -0.32

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, transcription


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, DNA binding


Protein domain


PfamPF00249, Myb-like DNA-binding domain
SMARTSM00717, SANT

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT4G36920, AT1G24260, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


20 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-1.821.58E-03
GSE17464Penta, controlPenta, PstDC3000 12 h-1.519.42E-03
GSE17464Penta, controlPenta, Flg22 2 h-2.063.12E-04
GSE17464Penta, controlPenta, Flg22 2 h-1.672.85E-03
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.523.13E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.581.44E-04
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.486.20E-04
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d-2.621.68E-04
GSE37269St0, WT, controlSt0, WT, TEV 21 d-3.078.22E-06
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.743.09E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.654.56E-05
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.665.14E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.262.85E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.847.17E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.537.53E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.021.78E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.921.12E-15
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.571.84E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.947.11E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.535.03E-03






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