co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G58900

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042821: pyridoxal biosynthetic process	0.00E+00
2	GO:1905177: tracheary element differentiation	0.00E+00
3	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
4	GO:0008298: intracellular mRNA localization	0.00E+00
5	GO:0090042: tubulin deacetylation	0.00E+00
6	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
7	GO:0015882: L-ascorbic acid transport	0.00E+00
8	GO:0071474: cellular hyperosmotic response	0.00E+00
9	GO:0006399: tRNA metabolic process	0.00E+00
10	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
11	GO:0070979: protein K11-linked ubiquitination	0.00E+00
12	GO:0043488: regulation of mRNA stability	0.00E+00
13	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
14	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
15	GO:0017038: protein import	0.00E+00
16	GO:0090279: regulation of calcium ion import	0.00E+00
17	GO:0042820: vitamin B6 catabolic process	0.00E+00
18	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
19	GO:1902326: positive regulation of chlorophyll biosynthetic process	0.00E+00
20	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
21	GO:0009658: chloroplast organization	1.63E-10
22	GO:0045038: protein import into chloroplast thylakoid membrane	2.09E-06
23	GO:1900871: chloroplast mRNA modification	7.22E-06
24	GO:0005977: glycogen metabolic process	2.51E-05
25	GO:2001141: regulation of RNA biosynthetic process	5.48E-05
26	GO:0010239: chloroplast mRNA processing	5.48E-05
27	GO:0010021: amylopectin biosynthetic process	9.64E-05
28	GO:0006021: inositol biosynthetic process	9.64E-05
29	GO:0010063: positive regulation of trichoblast fate specification	4.02E-04
30	GO:0000481: maturation of 5S rRNA	4.02E-04
31	GO:0006659: phosphatidylserine biosynthetic process	4.02E-04
32	GO:1902025: nitrate import	4.02E-04
33	GO:0051775: response to redox state	4.02E-04
34	GO:2000021: regulation of ion homeostasis	4.02E-04
35	GO:0070574: cadmium ion transmembrane transport	4.02E-04
36	GO:0051247: positive regulation of protein metabolic process	4.02E-04
37	GO:0090548: response to nitrate starvation	4.02E-04
38	GO:1902458: positive regulation of stomatal opening	4.02E-04
39	GO:0010028: xanthophyll cycle	4.02E-04
40	GO:0034337: RNA folding	4.02E-04
41	GO:2000905: negative regulation of starch metabolic process	4.02E-04
42	GO:0000305: response to oxygen radical	4.02E-04
43	GO:0006419: alanyl-tRNA aminoacylation	4.02E-04
44	GO:0000476: maturation of 4.5S rRNA	4.02E-04
45	GO:0009443: pyridoxal 5'-phosphate salvage	4.02E-04
46	GO:0000967: rRNA 5'-end processing	4.02E-04
47	GO:0031426: polycistronic mRNA processing	4.02E-04
48	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	4.02E-04
49	GO:0015969: guanosine tetraphosphate metabolic process	4.02E-04
50	GO:0000012: single strand break repair	4.02E-04
51	GO:0043266: regulation of potassium ion transport	4.02E-04
52	GO:0071482: cellular response to light stimulus	5.69E-04
53	GO:0019252: starch biosynthetic process	6.20E-04
54	GO:0008654: phospholipid biosynthetic process	6.20E-04
55	GO:0032502: developmental process	7.34E-04
56	GO:1900865: chloroplast RNA modification	8.05E-04
57	GO:0000256: allantoin catabolic process	8.71E-04
58	GO:1904143: positive regulation of carotenoid biosynthetic process	8.71E-04
59	GO:1903426: regulation of reactive oxygen species biosynthetic process	8.71E-04
60	GO:0010024: phytochromobilin biosynthetic process	8.71E-04
61	GO:0051262: protein tetramerization	8.71E-04
62	GO:0034470: ncRNA processing	8.71E-04
63	GO:1901959: positive regulation of cutin biosynthetic process	8.71E-04
64	GO:0060359: response to ammonium ion	8.71E-04
65	GO:0006352: DNA-templated transcription, initiation	1.08E-03
66	GO:0006415: translational termination	1.08E-03
67	GO:0043085: positive regulation of catalytic activity	1.08E-03
68	GO:0005975: carbohydrate metabolic process	1.32E-03
69	GO:0006788: heme oxidation	1.41E-03
70	GO:0006696: ergosterol biosynthetic process	1.41E-03
71	GO:0090153: regulation of sphingolipid biosynthetic process	1.41E-03
72	GO:1904278: positive regulation of wax biosynthetic process	1.41E-03
73	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	1.41E-03
74	GO:0043157: response to cation stress	1.41E-03
75	GO:0048586: regulation of long-day photoperiodism, flowering	1.41E-03
76	GO:0006954: inflammatory response	1.41E-03
77	GO:0010136: ureide catabolic process	1.41E-03
78	GO:0031145: anaphase-promoting complex-dependent catabolic process	1.41E-03
79	GO:0010623: programmed cell death involved in cell development	1.41E-03
80	GO:0010207: photosystem II assembly	1.57E-03
81	GO:0019853: L-ascorbic acid biosynthetic process	1.76E-03
82	GO:0051016: barbed-end actin filament capping	2.04E-03
83	GO:0090308: regulation of methylation-dependent chromatin silencing	2.04E-03
84	GO:0016556: mRNA modification	2.04E-03
85	GO:0046836: glycolipid transport	2.04E-03
86	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	2.04E-03
87	GO:0010071: root meristem specification	2.04E-03
88	GO:0030071: regulation of mitotic metaphase/anaphase transition	2.04E-03
89	GO:0006107: oxaloacetate metabolic process	2.04E-03
90	GO:0009226: nucleotide-sugar biosynthetic process	2.04E-03
91	GO:0006145: purine nucleobase catabolic process	2.04E-03
92	GO:0015979: photosynthesis	2.39E-03
93	GO:0007017: microtubule-based process	2.41E-03
94	GO:0006734: NADH metabolic process	2.74E-03
95	GO:0045723: positive regulation of fatty acid biosynthetic process	2.74E-03
96	GO:0010508: positive regulation of autophagy	2.74E-03
97	GO:0008295: spermidine biosynthetic process	2.74E-03
98	GO:0006749: glutathione metabolic process	2.74E-03
99	GO:0010109: regulation of photosynthesis	2.74E-03
100	GO:0048442: sepal development	2.74E-03
101	GO:0006661: phosphatidylinositol biosynthetic process	2.74E-03
102	GO:0009765: photosynthesis, light harvesting	2.74E-03
103	GO:2000306: positive regulation of photomorphogenesis	2.74E-03
104	GO:0006109: regulation of carbohydrate metabolic process	2.74E-03
105	GO:0009416: response to light stimulus	3.07E-03
106	GO:0019722: calcium-mediated signaling	3.44E-03
107	GO:0009107: lipoate biosynthetic process	3.51E-03
108	GO:0016123: xanthophyll biosynthetic process	3.51E-03
109	GO:0080110: sporopollenin biosynthetic process	3.51E-03
110	GO:0032876: negative regulation of DNA endoreduplication	3.51E-03
111	GO:0010268: brassinosteroid homeostasis	4.34E-03
112	GO:0032973: amino acid export	4.35E-03
113	GO:0050665: hydrogen peroxide biosynthetic process	4.35E-03
114	GO:0000741: karyogamy	4.35E-03
115	GO:0046855: inositol phosphate dephosphorylation	4.35E-03
116	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	4.35E-03
117	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	4.35E-03
118	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	4.35E-03
119	GO:0009959: negative gravitropism	4.35E-03
120	GO:0006655: phosphatidylglycerol biosynthetic process	4.35E-03
121	GO:0016554: cytidine to uridine editing	4.35E-03
122	GO:0009646: response to absence of light	4.67E-03
123	GO:0009791: post-embryonic development	5.01E-03
124	GO:0010189: vitamin E biosynthetic process	5.24E-03
125	GO:1901259: chloroplast rRNA processing	5.24E-03
126	GO:0009854: oxidative photosynthetic carbon pathway	5.24E-03
127	GO:0010019: chloroplast-nucleus signaling pathway	5.24E-03
128	GO:0080086: stamen filament development	5.24E-03
129	GO:0010076: maintenance of floral meristem identity	5.24E-03
130	GO:0048280: vesicle fusion with Golgi apparatus	5.24E-03
131	GO:0016132: brassinosteroid biosynthetic process	5.36E-03
132	GO:0006400: tRNA modification	6.19E-03
133	GO:0009395: phospholipid catabolic process	6.19E-03
134	GO:0043090: amino acid import	6.19E-03
135	GO:0051693: actin filament capping	6.19E-03
136	GO:0048437: floral organ development	6.19E-03
137	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	6.19E-03
138	GO:0016125: sterol metabolic process	6.51E-03
139	GO:0007267: cell-cell signaling	6.91E-03
140	GO:0032875: regulation of DNA endoreduplication	7.20E-03
141	GO:0032508: DNA duplex unwinding	7.20E-03
142	GO:0042255: ribosome assembly	7.20E-03
143	GO:2000070: regulation of response to water deprivation	7.20E-03
144	GO:0046620: regulation of organ growth	7.20E-03
145	GO:0006353: DNA-templated transcription, termination	7.20E-03
146	GO:0006875: cellular metal ion homeostasis	7.20E-03
147	GO:0048564: photosystem I assembly	7.20E-03
148	GO:0009690: cytokinin metabolic process	7.20E-03
149	GO:0006605: protein targeting	7.20E-03
150	GO:0010027: thylakoid membrane organization	7.77E-03
151	GO:0010204: defense response signaling pathway, resistance gene-independent	8.26E-03
152	GO:0009657: plastid organization	8.26E-03
153	GO:0032544: plastid translation	8.26E-03
154	GO:0017004: cytochrome complex assembly	8.26E-03
155	GO:0015996: chlorophyll catabolic process	8.26E-03
156	GO:0007186: G-protein coupled receptor signaling pathway	8.26E-03
157	GO:0015995: chlorophyll biosynthetic process	9.16E-03
158	GO:0048507: meristem development	9.38E-03
159	GO:0000373: Group II intron splicing	9.38E-03
160	GO:0000902: cell morphogenesis	9.38E-03
161	GO:0098656: anion transmembrane transport	9.38E-03
162	GO:0010206: photosystem II repair	9.38E-03
163	GO:0080144: amino acid homeostasis	9.38E-03
164	GO:0009051: pentose-phosphate shunt, oxidative branch	9.38E-03
165	GO:0018298: protein-chromophore linkage	1.02E-02
166	GO:0009638: phototropism	1.06E-02
167	GO:0048441: petal development	1.18E-02
168	GO:0009299: mRNA transcription	1.18E-02
169	GO:0006896: Golgi to vacuole transport	1.18E-02
170	GO:0010216: maintenance of DNA methylation	1.30E-02
171	GO:0019684: photosynthesis, light reaction	1.30E-02
172	GO:0009089: lysine biosynthetic process via diaminopimelate	1.30E-02
173	GO:0009773: photosynthetic electron transport in photosystem I	1.30E-02
174	GO:0016024: CDP-diacylglycerol biosynthetic process	1.44E-02
175	GO:0045037: protein import into chloroplast stroma	1.44E-02
176	GO:0006790: sulfur compound metabolic process	1.44E-02
177	GO:0055114: oxidation-reduction process	1.50E-02
178	GO:0006108: malate metabolic process	1.57E-02
179	GO:0030036: actin cytoskeleton organization	1.57E-02
180	GO:0009718: anthocyanin-containing compound biosynthetic process	1.57E-02
181	GO:0009725: response to hormone	1.57E-02
182	GO:0009767: photosynthetic electron transport chain	1.57E-02
183	GO:0010628: positive regulation of gene expression	1.57E-02
184	GO:0008380: RNA splicing	1.62E-02
185	GO:0007015: actin filament organization	1.71E-02
186	GO:0009887: animal organ morphogenesis	1.71E-02
187	GO:0006302: double-strand break repair	1.71E-02
188	GO:0048440: carpel development	1.71E-02
189	GO:0010030: positive regulation of seed germination	1.86E-02
190	GO:0046854: phosphatidylinositol phosphorylation	1.86E-02
191	GO:0008299: isoprenoid biosynthetic process	2.32E-02
192	GO:0016575: histone deacetylation	2.32E-02
193	GO:0006730: one-carbon metabolic process	2.64E-02
194	GO:0019748: secondary metabolic process	2.64E-02
195	GO:0030245: cellulose catabolic process	2.64E-02
196	GO:0009686: gibberellin biosynthetic process	2.81E-02
197	GO:0006012: galactose metabolic process	2.81E-02
198	GO:0080167: response to karrikin	2.95E-02
199	GO:0010089: xylem development	2.99E-02
200	GO:0010584: pollen exine formation	2.99E-02
201	GO:0042127: regulation of cell proliferation	2.99E-02
202	GO:0048443: stamen development	2.99E-02
203	GO:0009740: gibberellic acid mediated signaling pathway	3.02E-02
204	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.07E-02
205	GO:0016117: carotenoid biosynthetic process	3.16E-02
206	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.16E-02
207	GO:0042147: retrograde transport, endosome to Golgi	3.16E-02
208	GO:0006396: RNA processing	3.30E-02
209	GO:0008033: tRNA processing	3.34E-02
210	GO:0010087: phloem or xylem histogenesis	3.34E-02
211	GO:0042631: cellular response to water deprivation	3.34E-02
212	GO:0009742: brassinosteroid mediated signaling pathway	3.40E-02
213	GO:0006662: glycerol ether metabolic process	3.53E-02
214	GO:0010197: polar nucleus fusion	3.53E-02
215	GO:0010305: leaf vascular tissue pattern formation	3.53E-02
216	GO:0010182: sugar mediated signaling pathway	3.53E-02
217	GO:0048868: pollen tube development	3.53E-02
218	GO:0009741: response to brassinosteroid	3.53E-02
219	GO:0045489: pectin biosynthetic process	3.53E-02
220	GO:0055072: iron ion homeostasis	3.90E-02
221	GO:0006623: protein targeting to vacuole	3.90E-02
222	GO:0006891: intra-Golgi vesicle-mediated transport	4.09E-02
223	GO:0009630: gravitropism	4.29E-02
224	GO:0010583: response to cyclopentenone	4.29E-02
225	GO:0006508: proteolysis	4.38E-02
226	GO:0010090: trichome morphogenesis	4.49E-02
227	GO:0006464: cellular protein modification process	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0051721: protein phosphatase 2A binding	0.00E+00
2	GO:0042903: tubulin deacetylase activity	0.00E+00
3	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
4	GO:0046905: phytoene synthase activity	0.00E+00
5	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
6	GO:0005048: signal sequence binding	0.00E+00
7	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
8	GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity	0.00E+00
9	GO:0050613: delta14-sterol reductase activity	0.00E+00
10	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
11	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
12	GO:0010276: phytol kinase activity	0.00E+00
13	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
14	GO:0043014: alpha-tubulin binding	0.00E+00
15	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
16	GO:0019156: isoamylase activity	7.22E-06
17	GO:0019899: enzyme binding	1.09E-05
18	GO:0070402: NADPH binding	2.51E-05
19	GO:0043495: protein anchor	9.64E-05
20	GO:0001053: plastid sigma factor activity	9.64E-05
21	GO:0016987: sigma factor activity	9.64E-05
22	GO:0004556: alpha-amylase activity	2.14E-04
23	GO:0004462: lactoylglutathione lyase activity	2.14E-04
24	GO:0003993: acid phosphatase activity	3.25E-04
25	GO:0004813: alanine-tRNA ligase activity	4.02E-04
26	GO:0008746: NAD(P)+ transhydrogenase activity	4.02E-04
27	GO:0051996: squalene synthase activity	4.02E-04
28	GO:0004328: formamidase activity	4.02E-04
29	GO:0010347: L-galactose-1-phosphate phosphatase activity	4.02E-04
30	GO:0046906: tetrapyrrole binding	4.02E-04
31	GO:0005227: calcium activated cation channel activity	4.02E-04
32	GO:0051777: ent-kaurenoate oxidase activity	4.02E-04
33	GO:0016776: phosphotransferase activity, phosphate group as acceptor	4.02E-04
34	GO:0080042: ADP-glucose pyrophosphohydrolase activity	4.02E-04
35	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	4.02E-04
36	GO:0008158: hedgehog receptor activity	4.02E-04
37	GO:0004033: aldo-keto reductase (NADP) activity	4.66E-04
38	GO:0003747: translation release factor activity	6.82E-04
39	GO:0008728: GTP diphosphokinase activity	8.71E-04
40	GO:0052833: inositol monophosphate 4-phosphatase activity	8.71E-04
41	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	8.71E-04
42	GO:0004512: inositol-3-phosphate synthase activity	8.71E-04
43	GO:0004103: choline kinase activity	8.71E-04
44	GO:0048531: beta-1,3-galactosyltransferase activity	8.71E-04
45	GO:0017118: lipoyltransferase activity	8.71E-04
46	GO:0004362: glutathione-disulfide reductase activity	8.71E-04
47	GO:0080041: ADP-ribose pyrophosphohydrolase activity	8.71E-04
48	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	8.71E-04
49	GO:0043425: bHLH transcription factor binding	8.71E-04
50	GO:0004766: spermidine synthase activity	8.71E-04
51	GO:0052832: inositol monophosphate 3-phosphatase activity	8.71E-04
52	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	8.71E-04
53	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	8.71E-04
54	GO:0008934: inositol monophosphate 1-phosphatase activity	8.71E-04
55	GO:0004848: ureidoglycolate hydrolase activity	1.41E-03
56	GO:0015462: ATPase-coupled protein transmembrane transporter activity	1.41E-03
57	GO:0016992: lipoate synthase activity	1.41E-03
58	GO:0003913: DNA photolyase activity	1.41E-03
59	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.57E-03
60	GO:0004222: metalloendopeptidase activity	1.70E-03
61	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	2.04E-03
62	GO:0017057: 6-phosphogluconolactonase activity	2.04E-03
63	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	2.04E-03
64	GO:0017089: glycolipid transporter activity	2.04E-03
65	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	2.04E-03
66	GO:0015086: cadmium ion transmembrane transporter activity	2.04E-03
67	GO:0048487: beta-tubulin binding	2.04E-03
68	GO:0016149: translation release factor activity, codon specific	2.04E-03
69	GO:0048027: mRNA 5'-UTR binding	2.04E-03
70	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	2.04E-03
71	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	2.04E-03
72	GO:0005525: GTP binding	2.66E-03
73	GO:0042277: peptide binding	2.74E-03
74	GO:0004392: heme oxygenase (decyclizing) activity	2.74E-03
75	GO:0008891: glycolate oxidase activity	2.74E-03
76	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	2.74E-03
77	GO:0051861: glycolipid binding	2.74E-03
78	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.74E-03
79	GO:0009011: starch synthase activity	2.74E-03
80	GO:0004045: aminoacyl-tRNA hydrolase activity	2.74E-03
81	GO:0080032: methyl jasmonate esterase activity	2.74E-03
82	GO:0004871: signal transducer activity	2.82E-03
83	GO:0022891: substrate-specific transmembrane transporter activity	3.16E-03
84	GO:0016773: phosphotransferase activity, alcohol group as acceptor	3.51E-03
85	GO:0003924: GTPase activity	3.75E-03
86	GO:0003690: double-stranded DNA binding	4.29E-03
87	GO:0016615: malate dehydrogenase activity	4.35E-03
88	GO:0008200: ion channel inhibitor activity	4.35E-03
89	GO:0004605: phosphatidate cytidylyltransferase activity	4.35E-03
90	GO:0080030: methyl indole-3-acetate esterase activity	4.35E-03
91	GO:0003824: catalytic activity	5.12E-03
92	GO:0030060: L-malate dehydrogenase activity	5.24E-03
93	GO:0005261: cation channel activity	5.24E-03
94	GO:0008195: phosphatidate phosphatase activity	5.24E-03
95	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	5.24E-03
96	GO:0003730: mRNA 3'-UTR binding	5.24E-03
97	GO:0048038: quinone binding	5.36E-03
98	GO:0015103: inorganic anion transmembrane transporter activity	6.19E-03
99	GO:0005200: structural constituent of cytoskeleton	6.91E-03
100	GO:0008237: metallopeptidase activity	6.91E-03
101	GO:0008312: 7S RNA binding	7.20E-03
102	GO:0016168: chlorophyll binding	8.22E-03
103	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	8.26E-03
104	GO:0008047: enzyme activator activity	1.18E-02
105	GO:0015020: glucuronosyltransferase activity	1.18E-02
106	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.41E-02
107	GO:0000049: tRNA binding	1.44E-02
108	GO:0000976: transcription regulatory region sequence-specific DNA binding	1.44E-02
109	GO:0004519: endonuclease activity	1.57E-02
110	GO:0005315: inorganic phosphate transmembrane transporter activity	1.57E-02
111	GO:0031072: heat shock protein binding	1.57E-02
112	GO:0009982: pseudouridine synthase activity	1.57E-02
113	GO:0008081: phosphoric diester hydrolase activity	1.57E-02
114	GO:0004185: serine-type carboxypeptidase activity	1.67E-02
115	GO:0042802: identical protein binding	1.76E-02
116	GO:0016491: oxidoreductase activity	2.07E-02
117	GO:0004857: enzyme inhibitor activity	2.16E-02
118	GO:0004407: histone deacetylase activity	2.16E-02
119	GO:0005528: FK506 binding	2.16E-02
120	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.25E-02
121	GO:0016788: hydrolase activity, acting on ester bonds	2.31E-02
122	GO:0005345: purine nucleobase transmembrane transporter activity	2.32E-02
123	GO:0004176: ATP-dependent peptidase activity	2.48E-02
124	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.75E-02
125	GO:0008810: cellulase activity	2.81E-02
126	GO:0003727: single-stranded RNA binding	2.99E-02
127	GO:0008514: organic anion transmembrane transporter activity	2.99E-02
128	GO:0047134: protein-disulfide reductase activity	3.16E-02
129	GO:0004527: exonuclease activity	3.53E-02
130	GO:0005199: structural constituent of cell wall	3.53E-02
131	GO:0046873: metal ion transmembrane transporter activity	3.53E-02
132	GO:0008080: N-acetyltransferase activity	3.53E-02
133	GO:0010181: FMN binding	3.71E-02
134	GO:0004791: thioredoxin-disulfide reductase activity	3.71E-02
135	GO:0016853: isomerase activity	3.71E-02
136	GO:0050662: coenzyme binding	3.71E-02
137	GO:0003723: RNA binding	3.71E-02
138	GO:0019843: rRNA binding	4.01E-02
139	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	4.49E-02
140	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009507: chloroplast	1.19E-28
3	GO:0009570: chloroplast stroma	8.16E-09
4	GO:0009535: chloroplast thylakoid membrane	2.05E-06
5	GO:0080085: signal recognition particle, chloroplast targeting	7.22E-06
6	GO:0042651: thylakoid membrane	2.34E-04
7	GO:0031969: chloroplast membrane	4.51E-04
8	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	5.69E-04
9	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	6.82E-04
10	GO:0009941: chloroplast envelope	7.68E-04
11	GO:0008290: F-actin capping protein complex	8.71E-04
12	GO:0009528: plastid inner membrane	1.41E-03
13	GO:0015630: microtubule cytoskeleton	2.04E-03
14	GO:0009527: plastid outer membrane	2.74E-03
15	GO:0009523: photosystem II	5.01E-03
16	GO:0010319: stromule	6.91E-03
17	GO:0012507: ER to Golgi transport vesicle membrane	7.20E-03
18	GO:0009501: amyloplast	7.20E-03
19	GO:0009543: chloroplast thylakoid lumen	8.58E-03
20	GO:0042644: chloroplast nucleoid	9.38E-03
21	GO:0045298: tubulin complex	9.38E-03
22	GO:0005720: nuclear heterochromatin	9.38E-03
23	GO:0005680: anaphase-promoting complex	9.38E-03
24	GO:0016604: nuclear body	1.06E-02
25	GO:0032040: small-subunit processome	1.44E-02
26	GO:0031977: thylakoid lumen	1.54E-02
27	GO:0009508: plastid chromosome	1.57E-02
28	GO:0046658: anchored component of plasma membrane	1.85E-02
29	GO:0030176: integral component of endoplasmic reticulum membrane	1.86E-02
30	GO:0009654: photosystem II oxygen evolving complex	2.32E-02
31	GO:0009532: plastid stroma	2.48E-02
32	GO:0005773: vacuole	3.03E-02
33	GO:0009706: chloroplast inner membrane	3.21E-02
34	GO:0019898: extrinsic component of membrane	3.90E-02
35	GO:0009579: thylakoid	4.20E-02
36	GO:0009536: plastid	4.74E-02
37	GO:0009295: nucleoid	4.90E-02