gene detail

Gene description

TAIR ID: AT5G57890

Short description: Glutamine amidotransferase type 1 family protein

Pathogen responsiveness: 0.56

General responsiveness: -1.15

Orthologous

Rice:

OS03G0718000

Maize: No orthologous gene

Wheat:

TA.24576.1.A1_AT TA.24576.2.S1_AT

GO biological process

glutamine metabolic process, response to bacterium, tryptophan biosynthetic process

GO cellular component

chloroplast, cytoplasm

GO molecular function

anthranilate synthase activity

Protein domain

Pfam	PF00117, Glutamine amidotransferase class-I

Metabolic pathway

COMPLETE-ARO-ARA-PWY: superpathway of phenylalanine, tyrosine and tryptophan biosynthesis
TRPSYN-PWY: tryptophan biosynthesis

KEGG pathway

PATH:ath01230: Biosynthesis of amino acids
PATH:ath00400: Phenylalanine, tyrosine and tryptophan biosynthesis
PATH:ath00261: Monobactam biosynthesis

Transcriptional regulation

Regulator:
AT2G41070, AT2G36270, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

32 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	2.98	1.53E-09
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	3.07	8.37E-10
GSE13739	Col, WT, control 7 d	Col, WT, G.orontii 7 d	1.98	1.12E-08
GSE13739	Col, eds, control 7 d	Col, eds, G.orontii 7 d	2.09	7.21E-09
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	1.70	1.77E-02
GSE17464	Laer, control	Laer, Flg22 1 h	1.73	3.50E-04
GSE17464	Laer, control	Laer, Flg22 2 h	2.08	3.07E-05
GSE17464	Penta, control	Penta, Flg22 2 h	1.91	9.12E-05
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	1.94	2.23E-06
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	2.54	1.21E-07
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	2.16	9.03E-07
GSE18329	Col, wrky72_1, control	Col, wrky72_1, Hpa noco2 96 h	1.97	3.02E-13
GSE18329	Col, wrky72_1, control	Col, wrky72_2, Hpa noco2 96 h	1.84	1.00E-12
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	3.03	2.41E-09
GSE26206	Col, WT, control	Col, WT, R.solani_AG2_1 7 d	1.72	4.98E-05
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.76	2.55E-03
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	3.61	5.60E-05
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	3.60	1.83E-05
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	1.64	1.71E-04
GSE5615	Col, WT, GST 4 h	Col, WT, GST+NPP1 4 h	1.80	5.14E-09
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	1.78	1.50E-09
GSE5616	Col, WT, water 12 h	Col, WT, P. infestans 12 h	2.56	1.56E-08
GSE5616	Col, WT, water 6 h	Col, WT, P. infestans 6 h	3.67	7.87E-11
GSE5686	Col, WT, control 5 d	Col, WT, G.orontii 5 d	1.54	3.17E-08
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 HrpA- 12 h	1.87	2.32E-03
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.84	1.10E-03
GSE62537	Col, WT, control 48 h	Col, WT, V.longisporum 48 h	1.86	8.50E-03
GSE62537	Col, ndr1, control 48 h	Col, ndr1, V.longisporum 48 h	1.60	1.57E-02
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h	2.04	6.43E-05
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	2.85	1.74E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 2-4 h	1.95	1.31E-04
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	2.91	1.74E-05