co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G57890

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072722: response to amitrole	0.00E+00
2	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
3	GO:0002376: immune system process	0.00E+00
4	GO:0034976: response to endoplasmic reticulum stress	1.38E-13
5	GO:0006457: protein folding	1.77E-13
6	GO:0009627: systemic acquired resistance	3.73E-09
7	GO:0045454: cell redox homeostasis	6.13E-08
8	GO:0046686: response to cadmium ion	1.23E-07
9	GO:0010150: leaf senescence	1.37E-06
10	GO:0030968: endoplasmic reticulum unfolded protein response	1.61E-06
11	GO:0000162: tryptophan biosynthetic process	1.60E-05
12	GO:0042742: defense response to bacterium	1.63E-05
13	GO:0006979: response to oxidative stress	1.67E-05
14	GO:0009697: salicylic acid biosynthetic process	2.48E-05
15	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	5.23E-05
16	GO:0030091: protein repair	9.09E-05
17	GO:0006605: protein targeting	9.09E-05
18	GO:0009553: embryo sac development	9.38E-05
19	GO:0010120: camalexin biosynthetic process	1.14E-04
20	GO:0034975: protein folding in endoplasmic reticulum	1.35E-04
21	GO:0006047: UDP-N-acetylglucosamine metabolic process	1.35E-04
22	GO:0009700: indole phytoalexin biosynthetic process	1.35E-04
23	GO:0010230: alternative respiration	1.35E-04
24	GO:0043266: regulation of potassium ion transport	1.35E-04
25	GO:0010266: response to vitamin B1	1.35E-04
26	GO:0019276: UDP-N-acetylgalactosamine metabolic process	1.35E-04
27	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.11E-04
28	GO:0030003: cellular cation homeostasis	3.11E-04
29	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	3.11E-04
30	GO:0006011: UDP-glucose metabolic process	5.13E-04
31	GO:0010272: response to silver ion	5.13E-04
32	GO:0055074: calcium ion homeostasis	5.13E-04
33	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	5.13E-04
34	GO:0009651: response to salt stress	5.53E-04
35	GO:0031348: negative regulation of defense response	6.38E-04
36	GO:0071456: cellular response to hypoxia	6.38E-04
37	GO:0009625: response to insect	6.94E-04
38	GO:0072334: UDP-galactose transmembrane transport	7.34E-04
39	GO:0033014: tetrapyrrole biosynthetic process	7.34E-04
40	GO:0010116: positive regulation of abscisic acid biosynthetic process	7.34E-04
41	GO:0009306: protein secretion	7.52E-04
42	GO:0051365: cellular response to potassium ion starvation	9.73E-04
43	GO:0045088: regulation of innate immune response	9.73E-04
44	GO:0080037: negative regulation of cytokinin-activated signaling pathway	9.73E-04
45	GO:0009409: response to cold	9.87E-04
46	GO:0000302: response to reactive oxygen species	1.15E-03
47	GO:0000304: response to singlet oxygen	1.23E-03
48	GO:2000762: regulation of phenylpropanoid metabolic process	1.23E-03
49	GO:0009615: response to virus	1.64E-03
50	GO:0042372: phylloquinone biosynthetic process	1.81E-03
51	GO:0010555: response to mannitol	1.81E-03
52	GO:1902074: response to salt	2.12E-03
53	GO:0009617: response to bacterium	2.20E-03
54	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.46E-03
55	GO:0009819: drought recovery	2.46E-03
56	GO:0030162: regulation of proteolysis	2.46E-03
57	GO:0031540: regulation of anthocyanin biosynthetic process	2.46E-03
58	GO:0055075: potassium ion homeostasis	2.46E-03
59	GO:0010043: response to zinc ion	2.46E-03
60	GO:0009699: phenylpropanoid biosynthetic process	2.81E-03
61	GO:0009808: lignin metabolic process	2.81E-03
62	GO:0006099: tricarboxylic acid cycle	2.82E-03
63	GO:0009555: pollen development	3.02E-03
64	GO:0015780: nucleotide-sugar transport	3.17E-03
65	GO:0046685: response to arsenic-containing substance	3.17E-03
66	GO:0006783: heme biosynthetic process	3.17E-03
67	GO:0010112: regulation of systemic acquired resistance	3.17E-03
68	GO:0042542: response to hydrogen peroxide	3.33E-03
69	GO:0051707: response to other organism	3.47E-03
70	GO:0010205: photoinhibition	3.55E-03
71	GO:0043067: regulation of programmed cell death	3.55E-03
72	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.55E-03
73	GO:0006032: chitin catabolic process	3.95E-03
74	GO:0006816: calcium ion transport	4.36E-03
75	GO:0009682: induced systemic resistance	4.36E-03
76	GO:0052544: defense response by callose deposition in cell wall	4.36E-03
77	GO:0009089: lysine biosynthetic process via diaminopimelate	4.36E-03
78	GO:0000272: polysaccharide catabolic process	4.36E-03
79	GO:0006790: sulfur compound metabolic process	4.79E-03
80	GO:0010075: regulation of meristem growth	5.22E-03
81	GO:0018107: peptidyl-threonine phosphorylation	5.22E-03
82	GO:0006886: intracellular protein transport	5.25E-03
83	GO:0009934: regulation of meristem structural organization	5.68E-03
84	GO:0046854: phosphatidylinositol phosphorylation	6.14E-03
85	GO:0080147: root hair cell development	7.11E-03
86	GO:2000377: regulation of reactive oxygen species metabolic process	7.11E-03
87	GO:0006874: cellular calcium ion homeostasis	7.62E-03
88	GO:0016998: cell wall macromolecule catabolic process	8.14E-03
89	GO:0009414: response to water deprivation	8.49E-03
90	GO:0030433: ubiquitin-dependent ERAD pathway	8.67E-03
91	GO:0006012: galactose metabolic process	9.21E-03
92	GO:0055114: oxidation-reduction process	9.31E-03
93	GO:0009790: embryo development	9.68E-03
94	GO:0010118: stomatal movement	1.09E-02
95	GO:0042631: cellular response to water deprivation	1.09E-02
96	GO:0000413: protein peptidyl-prolyl isomerization	1.09E-02
97	GO:0006520: cellular amino acid metabolic process	1.15E-02
98	GO:0010197: polar nucleus fusion	1.15E-02
99	GO:0048868: pollen tube development	1.15E-02
100	GO:0009646: response to absence of light	1.21E-02
101	GO:0009851: auxin biosynthetic process	1.27E-02
102	GO:0010193: response to ozone	1.34E-02
103	GO:0009630: gravitropism	1.40E-02
104	GO:1901657: glycosyl compound metabolic process	1.46E-02
105	GO:0030163: protein catabolic process	1.46E-02
106	GO:0009567: double fertilization forming a zygote and endosperm	1.53E-02
107	GO:0006464: cellular protein modification process	1.53E-02
108	GO:0006952: defense response	1.56E-02
109	GO:0009816: defense response to bacterium, incompatible interaction	1.80E-02
110	GO:0015995: chlorophyll biosynthetic process	1.95E-02
111	GO:0016311: dephosphorylation	2.02E-02
112	GO:0009817: defense response to fungus, incompatible interaction	2.09E-02
113	GO:0080167: response to karrikin	2.21E-02
114	GO:0010200: response to chitin	2.28E-02
115	GO:0045087: innate immune response	2.48E-02
116	GO:0009737: response to abscisic acid	2.73E-02
117	GO:0009644: response to high light intensity	3.14E-02
118	GO:0009751: response to salicylic acid	3.21E-02
119	GO:0009408: response to heat	3.26E-02
120	GO:0006855: drug transmembrane transport	3.31E-02
121	GO:0031347: regulation of defense response	3.40E-02
122	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.40E-02
123	GO:0009846: pollen germination	3.49E-02
124	GO:0009753: response to jasmonic acid	3.49E-02
125	GO:0006486: protein glycosylation	3.67E-02
126	GO:0010224: response to UV-B	3.76E-02
127	GO:0006096: glycolytic process	4.13E-02
128	GO:0048316: seed development	4.23E-02
129	GO:0050832: defense response to fungus	4.42E-02
130	GO:0015031: protein transport	4.44E-02
131	GO:0006508: proteolysis	4.64E-02
132	GO:0009624: response to nematode	4.71E-02
133	GO:0018105: peptidyl-serine phosphorylation	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
2	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
3	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
4	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	0.00E+00
5	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
6	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
7	GO:0003756: protein disulfide isomerase activity	1.46E-12
8	GO:0051082: unfolded protein binding	6.23E-06
9	GO:0005460: UDP-glucose transmembrane transporter activity	8.07E-06
10	GO:0005459: UDP-galactose transmembrane transporter activity	2.48E-05
11	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	5.23E-05
12	GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity	1.35E-04
13	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.35E-04
14	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.35E-04
15	GO:0004048: anthranilate phosphoribosyltransferase activity	1.35E-04
16	GO:0004325: ferrochelatase activity	1.35E-04
17	GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity	1.35E-04
18	GO:0048037: cofactor binding	1.35E-04
19	GO:0008909: isochorismate synthase activity	1.35E-04
20	GO:0010285: L,L-diaminopimelate aminotransferase activity	1.35E-04
21	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.35E-04
22	GO:0004775: succinate-CoA ligase (ADP-forming) activity	3.11E-04
23	GO:0004338: glucan exo-1,3-beta-glucosidase activity	3.11E-04
24	GO:0004776: succinate-CoA ligase (GDP-forming) activity	3.11E-04
25	GO:0005509: calcium ion binding	4.60E-04
26	GO:0000030: mannosyltransferase activity	5.13E-04
27	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	5.13E-04
28	GO:0004148: dihydrolipoyl dehydrogenase activity	5.13E-04
29	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	5.13E-04
30	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	5.13E-04
31	GO:0035529: NADH pyrophosphatase activity	7.34E-04
32	GO:0016656: monodehydroascorbate reductase (NADH) activity	7.34E-04
33	GO:0004834: tryptophan synthase activity	9.73E-04
34	GO:0016853: isomerase activity	1.01E-03
35	GO:0030246: carbohydrate binding	1.08E-03
36	GO:0047631: ADP-ribose diphosphatase activity	1.23E-03
37	GO:0008483: transaminase activity	1.47E-03
38	GO:0000210: NAD+ diphosphatase activity	1.51E-03
39	GO:0004029: aldehyde dehydrogenase (NAD) activity	1.51E-03
40	GO:0051920: peroxiredoxin activity	1.81E-03
41	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.81E-03
42	GO:0005261: cation channel activity	1.81E-03
43	GO:0004656: procollagen-proline 4-dioxygenase activity	1.81E-03
44	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	1.81E-03
45	GO:0030247: polysaccharide binding	1.93E-03
46	GO:0008320: protein transmembrane transporter activity	2.12E-03
47	GO:0016209: antioxidant activity	2.46E-03
48	GO:0004034: aldose 1-epimerase activity	2.46E-03
49	GO:0003746: translation elongation factor activity	2.70E-03
50	GO:0008135: translation factor activity, RNA binding	2.81E-03
51	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	3.55E-03
52	GO:0004743: pyruvate kinase activity	3.55E-03
53	GO:0030955: potassium ion binding	3.55E-03
54	GO:0050660: flavin adenine dinucleotide binding	3.68E-03
55	GO:0008233: peptidase activity	3.93E-03
56	GO:0004568: chitinase activity	3.95E-03
57	GO:0005262: calcium channel activity	5.22E-03
58	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.68E-03
59	GO:0005217: intracellular ligand-gated ion channel activity	6.14E-03
60	GO:0008061: chitin binding	6.14E-03
61	GO:0004970: ionotropic glutamate receptor activity	6.14E-03
62	GO:0004190: aspartic-type endopeptidase activity	6.14E-03
63	GO:0015035: protein disulfide oxidoreductase activity	6.82E-03
64	GO:0031418: L-ascorbic acid binding	7.11E-03
65	GO:0004298: threonine-type endopeptidase activity	8.14E-03
66	GO:0016779: nucleotidyltransferase activity	8.67E-03
67	GO:0030170: pyridoxal phosphate binding	9.20E-03
68	GO:0008810: cellulase activity	9.21E-03
69	GO:0004674: protein serine/threonine kinase activity	1.24E-02
70	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.46E-02
71	GO:0102483: scopolin beta-glucosidase activity	1.95E-02
72	GO:0004683: calmodulin-dependent protein kinase activity	1.95E-02
73	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.02E-02
74	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.09E-02
75	GO:0005507: copper ion binding	2.13E-02
76	GO:0015238: drug transmembrane transporter activity	2.17E-02
77	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.32E-02
78	GO:0050897: cobalt ion binding	2.32E-02
79	GO:0016301: kinase activity	2.41E-02
80	GO:0052689: carboxylic ester hydrolase activity	2.44E-02
81	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.48E-02
82	GO:0008422: beta-glucosidase activity	2.64E-02
83	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.85E-02
84	GO:0005506: iron ion binding	3.24E-02
85	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.31E-02
86	GO:0051287: NAD binding	3.40E-02
87	GO:0016298: lipase activity	3.76E-02
88	GO:0031625: ubiquitin protein ligase binding	3.95E-02
89	GO:0016746: transferase activity, transferring acyl groups	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0005788: endoplasmic reticulum lumen	5.54E-19
3	GO:0005783: endoplasmic reticulum	5.69E-19
4	GO:0005789: endoplasmic reticulum membrane	9.62E-06
5	GO:0009507: chloroplast	2.21E-05
6	GO:0045252: oxoglutarate dehydrogenase complex	1.35E-04
7	GO:0005886: plasma membrane	1.59E-04
8	GO:0005774: vacuolar membrane	1.61E-04
9	GO:0048046: apoplast	1.86E-04
10	GO:0009505: plant-type cell wall	1.97E-04
11	GO:0030134: ER to Golgi transport vesicle	3.11E-04
12	GO:0005901: caveola	3.11E-04
13	GO:0030176: integral component of endoplasmic reticulum membrane	3.91E-04
14	GO:0005773: vacuole	5.39E-04
15	GO:0030660: Golgi-associated vesicle membrane	9.73E-04
16	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	9.73E-04
17	GO:0005623: cell	1.21E-03
18	GO:0016592: mediator complex	1.22E-03
19	GO:0030173: integral component of Golgi membrane	1.81E-03
20	GO:0005801: cis-Golgi network	1.81E-03
21	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	2.46E-03
22	GO:0005618: cell wall	2.63E-03
23	GO:0019773: proteasome core complex, alpha-subunit complex	2.81E-03
24	GO:0000326: protein storage vacuole	2.81E-03
25	GO:0005829: cytosol	3.20E-03
26	GO:0005765: lysosomal membrane	4.36E-03
27	GO:0005839: proteasome core complex	8.14E-03
28	GO:0016020: membrane	1.03E-02
29	GO:0005759: mitochondrial matrix	1.04E-02
30	GO:0005576: extracellular region	1.16E-02
31	GO:0009536: plastid	1.20E-02
32	GO:0019005: SCF ubiquitin ligase complex	2.09E-02
33	GO:0031969: chloroplast membrane	2.21E-02
34	GO:0043231: intracellular membrane-bounded organelle	3.59E-02
35	GO:0000502: proteasome complex	3.67E-02
36	GO:0005747: mitochondrial respiratory chain complex I	4.23E-02
37	GO:0005834: heterotrimeric G-protein complex	4.32E-02