gene detail

Gene description

TAIR ID: AT5G55730

Short description: FASCICLIN-like arabinogalactan 1

Pathogen responsiveness: 0.36

General responsiveness: -0.83

Orthologous

Rice:

OS08G0321000

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

shoot system development, root development

GO cellular component

plasma membrane, anchored component of membrane, apoplast, anchored component of plasma membrane, cell wall

GO molecular function

unkown

Protein domain

Pfam	PF02469, Fasciclin domain
SMART	SM00554, FAS1

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G16857, AT4G16110, AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

25 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, erf104 ko, water 4 h	Col, erf104 ko, Flg22 4 h	-1.78	6.88E-03
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-2.07	1.94E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-2.90	6.74E-06
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-2.43	4.73E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-3.34	7.79E-11
GSE20278	Col, RPL18-HF, control, polysomal RNA	Col, RPL18-HF, TuMV 10 d, polysomal RNA	-2.16	3.05E-03
GSE20278	Col, RPL18-HF, control	Col, RPL18-HF, TuMV 10 d	-2.01	3.01E-03
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-3.61	1.85E-05
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-3.74	1.43E-06
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-2.20	2.44E-04
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-3.34	4.68E-06
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-3.00	2.12E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.83	6.62E-08
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-2.71	1.29E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.73	9.40E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-2.31	1.19E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.51	2.80E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.25	1.83E-10
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-3.86	1.70E-03
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.95	1.62E-03
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-1.63	1.58E-02
GSE5615	Col, WT, water 4 h	Col, WT, Flg22 4 h	-1.51	1.16E-07
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	-1.56	2.62E-08
GSE6556	Col, WT, control	Col, WT, PstDC3000 AvrRpt2 48 h	-1.56	5.47E-04
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	-2.45	2.88E-06