co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G55730

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042425: choline biosynthetic process	0.00E+00
2	GO:1905499: trichome papilla formation	0.00E+00
3	GO:0071555: cell wall organization	8.16E-12
4	GO:0007017: microtubule-based process	2.05E-07
5	GO:0071258: cellular response to gravity	6.05E-07
6	GO:0009828: plant-type cell wall loosening	2.05E-06
7	GO:0042546: cell wall biogenesis	1.68E-05
8	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.16E-05
9	GO:0009664: plant-type cell wall organization	2.46E-05
10	GO:0009826: unidimensional cell growth	2.93E-05
11	GO:0007155: cell adhesion	6.41E-05
12	GO:0006869: lipid transport	9.40E-05
13	GO:0019510: S-adenosylhomocysteine catabolic process	1.08E-04
14	GO:0005980: glycogen catabolic process	1.08E-04
15	GO:0000032: cell wall mannoprotein biosynthetic process	1.08E-04
16	GO:0032025: response to cobalt ion	1.08E-04
17	GO:0042759: long-chain fatty acid biosynthetic process	1.08E-04
18	GO:0010411: xyloglucan metabolic process	1.13E-04
19	GO:0006949: syncytium formation	1.44E-04
20	GO:0010198: synergid death	2.52E-04
21	GO:0033353: S-adenosylmethionine cycle	2.52E-04
22	GO:0010025: wax biosynthetic process	3.21E-04
23	GO:0009833: plant-type primary cell wall biogenesis	3.21E-04
24	GO:0090506: axillary shoot meristem initiation	4.19E-04
25	GO:0033591: response to L-ascorbic acid	4.19E-04
26	GO:0006065: UDP-glucuronate biosynthetic process	4.19E-04
27	GO:0016998: cell wall macromolecule catabolic process	4.33E-04
28	GO:0030245: cellulose catabolic process	4.74E-04
29	GO:0051016: barbed-end actin filament capping	6.01E-04
30	GO:0050482: arachidonic acid secretion	6.01E-04
31	GO:0009298: GDP-mannose biosynthetic process	6.01E-04
32	GO:0010371: regulation of gibberellin biosynthetic process	6.01E-04
33	GO:0042335: cuticle development	6.53E-04
34	GO:0015976: carbon utilization	7.98E-04
35	GO:0015689: molybdate ion transport	7.98E-04
36	GO:0008295: spermidine biosynthetic process	7.98E-04
37	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	7.98E-04
38	GO:0009956: radial pattern formation	7.98E-04
39	GO:0010583: response to cyclopentenone	9.14E-04
40	GO:0006665: sphingolipid metabolic process	1.01E-03
41	GO:0048359: mucilage metabolic process involved in seed coat development	1.01E-03
42	GO:0006656: phosphatidylcholine biosynthetic process	1.01E-03
43	GO:0045487: gibberellin catabolic process	1.01E-03
44	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.23E-03
45	GO:0006014: D-ribose metabolic process	1.23E-03
46	GO:0010067: procambium histogenesis	1.47E-03
47	GO:0009082: branched-chain amino acid biosynthetic process	1.47E-03
48	GO:0048280: vesicle fusion with Golgi apparatus	1.47E-03
49	GO:0009099: valine biosynthetic process	1.47E-03
50	GO:0009554: megasporogenesis	1.47E-03
51	GO:0030244: cellulose biosynthetic process	1.58E-03
52	GO:0009813: flavonoid biosynthetic process	1.66E-03
53	GO:0009832: plant-type cell wall biogenesis	1.66E-03
54	GO:0048528: post-embryonic root development	1.73E-03
55	GO:0016051: carbohydrate biosynthetic process	1.99E-03
56	GO:0006644: phospholipid metabolic process	2.00E-03
57	GO:0045010: actin nucleation	2.00E-03
58	GO:0009097: isoleucine biosynthetic process	2.28E-03
59	GO:0006631: fatty acid metabolic process	2.36E-03
60	GO:0006754: ATP biosynthetic process	2.57E-03
61	GO:0015780: nucleotide-sugar transport	2.57E-03
62	GO:0005975: carbohydrate metabolic process	2.66E-03
63	GO:0009098: leucine biosynthetic process	2.88E-03
64	GO:0042761: very long-chain fatty acid biosynthetic process	2.88E-03
65	GO:0016573: histone acetylation	2.88E-03
66	GO:0010192: mucilage biosynthetic process	3.20E-03
67	GO:0006896: Golgi to vacuole transport	3.20E-03
68	GO:0010015: root morphogenesis	3.53E-03
69	GO:0030036: actin cytoskeleton organization	4.23E-03
70	GO:0016042: lipid catabolic process	4.28E-03
71	GO:0009266: response to temperature stimulus	4.59E-03
72	GO:0009933: meristem structural organization	4.59E-03
73	GO:0010223: secondary shoot formation	4.59E-03
74	GO:0006338: chromatin remodeling	5.75E-03
75	GO:0051017: actin filament bundle assembly	5.75E-03
76	GO:0019953: sexual reproduction	6.15E-03
77	GO:0043622: cortical microtubule organization	6.15E-03
78	GO:0006730: one-carbon metabolic process	6.99E-03
79	GO:0009294: DNA mediated transformation	7.42E-03
80	GO:0001944: vasculature development	7.42E-03
81	GO:0006633: fatty acid biosynthetic process	7.64E-03
82	GO:0010089: xylem development	7.87E-03
83	GO:0019722: calcium-mediated signaling	7.87E-03
84	GO:0010091: trichome branching	7.87E-03
85	GO:0042147: retrograde transport, endosome to Golgi	8.32E-03
86	GO:0045490: pectin catabolic process	8.39E-03
87	GO:0000226: microtubule cytoskeleton organization	8.79E-03
88	GO:0080022: primary root development	8.79E-03
89	GO:0010087: phloem or xylem histogenesis	8.79E-03
90	GO:0045489: pectin biosynthetic process	9.26E-03
91	GO:0010305: leaf vascular tissue pattern formation	9.26E-03
92	GO:0006623: protein targeting to vacuole	1.02E-02
93	GO:0010183: pollen tube guidance	1.02E-02
94	GO:0019252: starch biosynthetic process	1.02E-02
95	GO:0006891: intra-Golgi vesicle-mediated transport	1.07E-02
96	GO:0016125: sterol metabolic process	1.23E-02
97	GO:0007267: cell-cell signaling	1.28E-02
98	GO:0000910: cytokinesis	1.34E-02
99	GO:0016126: sterol biosynthetic process	1.39E-02
100	GO:0006888: ER to Golgi vesicle-mediated transport	1.56E-02
101	GO:0016049: cell growth	1.62E-02
102	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.67E-02
103	GO:0009817: defense response to fungus, incompatible interaction	1.68E-02
104	GO:0010043: response to zinc ion	1.86E-02
105	GO:0007568: aging	1.86E-02
106	GO:0032259: methylation	2.29E-02
107	GO:0010114: response to red light	2.38E-02
108	GO:0008643: carbohydrate transport	2.52E-02
109	GO:0042538: hyperosmotic salinity response	2.80E-02
110	GO:0009809: lignin biosynthetic process	2.94E-02
111	GO:0006486: protein glycosylation	2.94E-02
112	GO:0042545: cell wall modification	3.70E-02

Rank	GO Term	Adjusted P value
1	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
2	GO:0004496: mevalonate kinase activity	0.00E+00
3	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
4	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
5	GO:0005504: fatty acid binding	2.29E-06
6	GO:0005200: structural constituent of cytoskeleton	2.35E-06
7	GO:0045430: chalcone isomerase activity	1.03E-05
8	GO:0016762: xyloglucan:xyloglucosyl transferase activity	5.07E-05
9	GO:0016759: cellulose synthase activity	6.82E-05
10	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.07E-04
11	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	1.08E-04
12	GO:0004013: adenosylhomocysteinase activity	1.08E-04
13	GO:0008184: glycogen phosphorylase activity	1.08E-04
14	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	1.08E-04
15	GO:0004645: phosphorylase activity	1.08E-04
16	GO:0004476: mannose-6-phosphate isomerase activity	1.08E-04
17	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.13E-04
18	GO:0004565: beta-galactosidase activity	2.25E-04
19	GO:0008289: lipid binding	2.33E-04
20	GO:0004766: spermidine synthase activity	2.52E-04
21	GO:0048531: beta-1,3-galactosyltransferase activity	2.52E-04
22	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	2.52E-04
23	GO:0000234: phosphoethanolamine N-methyltransferase activity	2.52E-04
24	GO:0003979: UDP-glucose 6-dehydrogenase activity	4.19E-04
25	GO:0008810: cellulase activity	5.16E-04
26	GO:0016760: cellulose synthase (UDP-forming) activity	5.16E-04
27	GO:0052655: L-valine transaminase activity	6.01E-04
28	GO:0001872: (1->3)-beta-D-glucan binding	6.01E-04
29	GO:0052656: L-isoleucine transaminase activity	6.01E-04
30	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	6.01E-04
31	GO:0052654: L-leucine transaminase activity	6.01E-04
32	GO:0004084: branched-chain-amino-acid transaminase activity	7.98E-04
33	GO:0052793: pectin acetylesterase activity	7.98E-04
34	GO:0015098: molybdate ion transmembrane transporter activity	7.98E-04
35	GO:0016757: transferase activity, transferring glycosyl groups	9.47E-04
36	GO:0051015: actin filament binding	9.72E-04
37	GO:0009922: fatty acid elongase activity	1.01E-03
38	GO:0004623: phospholipase A2 activity	1.01E-03
39	GO:0004747: ribokinase activity	1.47E-03
40	GO:0051753: mannan synthase activity	1.47E-03
41	GO:0008865: fructokinase activity	2.00E-03
42	GO:0052747: sinapyl alcohol dehydrogenase activity	2.00E-03
43	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	2.57E-03
44	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	2.57E-03
45	GO:0051287: NAD binding	3.08E-03
46	GO:0015020: glucuronosyltransferase activity	3.20E-03
47	GO:0045551: cinnamyl-alcohol dehydrogenase activity	3.87E-03
48	GO:0004089: carbonate dehydratase activity	4.23E-03
49	GO:0030599: pectinesterase activity	4.58E-03
50	GO:0004857: enzyme inhibitor activity	5.75E-03
51	GO:0033612: receptor serine/threonine kinase binding	6.56E-03
52	GO:0030570: pectate lyase activity	7.42E-03
53	GO:0008514: organic anion transmembrane transporter activity	7.87E-03
54	GO:0005102: receptor binding	8.32E-03
55	GO:0003713: transcription coactivator activity	9.26E-03
56	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.28E-02
57	GO:0030246: carbohydrate binding	1.34E-02
58	GO:0008375: acetylglucosaminyltransferase activity	1.51E-02
59	GO:0030247: polysaccharide binding	1.56E-02
60	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.62E-02
61	GO:0052689: carboxylic ester hydrolase activity	1.79E-02
62	GO:0003746: translation elongation factor activity	1.99E-02
63	GO:0000149: SNARE binding	2.12E-02
64	GO:0005484: SNAP receptor activity	2.38E-02
65	GO:0003924: GTPase activity	2.39E-02
66	GO:0009055: electron carrier activity	2.56E-02
67	GO:0045330: aspartyl esterase activity	3.17E-02
68	GO:0045735: nutrient reservoir activity	3.32E-02
69	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.39E-02
70	GO:0003779: actin binding	3.70E-02
71	GO:0016829: lyase activity	4.69E-02
72	GO:0030170: pyridoxal phosphate binding	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0005618: cell wall	1.87E-12
2	GO:0031225: anchored component of membrane	1.06E-08
3	GO:0005886: plasma membrane	1.61E-08
4	GO:0048046: apoplast	1.95E-08
5	GO:0046658: anchored component of plasma membrane	5.29E-08
6	GO:0045298: tubulin complex	1.32E-06
7	GO:0005576: extracellular region	5.43E-05
8	GO:0005794: Golgi apparatus	8.08E-05
9	GO:0009505: plant-type cell wall	8.67E-05
10	GO:0009923: fatty acid elongase complex	1.08E-04
11	GO:0016020: membrane	2.79E-04
12	GO:0005875: microtubule associated complex	3.21E-04
13	GO:0010330: cellulose synthase complex	4.19E-04
14	GO:0005853: eukaryotic translation elongation factor 1 complex	4.19E-04
15	GO:0015630: microtubule cytoskeleton	6.01E-04
16	GO:0010005: cortical microtubule, transverse to long axis	1.47E-03
17	GO:0000123: histone acetyltransferase complex	1.73E-03
18	GO:0012507: ER to Golgi transport vesicle membrane	2.00E-03
19	GO:0009506: plasmodesma	2.50E-03
20	GO:0009570: chloroplast stroma	3.96E-03
21	GO:0031410: cytoplasmic vesicle	6.99E-03
22	GO:0015629: actin cytoskeleton	7.42E-03
23	GO:0000139: Golgi membrane	8.68E-03
24	GO:0009504: cell plate	1.02E-02
25	GO:0005874: microtubule	1.56E-02
26	GO:0005802: trans-Golgi network	1.67E-02
27	GO:0005768: endosome	1.97E-02
28	GO:0031201: SNARE complex	2.25E-02
29	GO:0031902: late endosome membrane	2.25E-02
30	GO:0005773: vacuole	2.33E-02
31	GO:0005856: cytoskeleton	2.59E-02
32	GO:0009536: plastid	2.90E-02
33	GO:0005789: endoplasmic reticulum membrane	3.80E-02