Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G55730

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000819: sister chromatid segregation0.00E+00
2GO:0009971: anastral spindle assembly involved in male meiosis0.00E+00
3GO:0044774: mitotic DNA integrity checkpoint0.00E+00
4GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement0.00E+00
5GO:0007018: microtubule-based movement3.80E-06
6GO:0009640: photomorphogenesis3.21E-05
7GO:0043987: histone H3-S10 phosphorylation3.64E-05
8GO:0010442: guard cell morphogenesis3.64E-05
9GO:0052541: plant-type cell wall cellulose metabolic process9.09E-05
10GO:1901529: positive regulation of anion channel activity9.09E-05
11GO:0080175: phragmoplast microtubule organization9.09E-05
12GO:0010033: response to organic substance9.09E-05
13GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process1.58E-04
14GO:1902806: regulation of cell cycle G1/S phase transition1.58E-04
15GO:0006696: ergosterol biosynthetic process1.58E-04
16GO:0030261: chromosome condensation1.58E-04
17GO:0007052: mitotic spindle organization1.58E-04
18GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement1.58E-04
19GO:0048510: regulation of timing of transition from vegetative to reproductive phase2.11E-04
20GO:0010583: response to cyclopentenone2.26E-04
21GO:0016572: histone phosphorylation2.33E-04
22GO:0009647: skotomorphogenesis2.33E-04
23GO:0009558: embryo sac cellularization2.33E-04
24GO:0032465: regulation of cytokinesis2.33E-04
25GO:0000910: cytokinesis2.91E-04
26GO:0000914: phragmoplast assembly3.14E-04
27GO:0007112: male meiosis cytokinesis3.14E-04
28GO:0006808: regulation of nitrogen utilization3.14E-04
29GO:0007094: mitotic spindle assembly checkpoint4.01E-04
30GO:0010389: regulation of G2/M transition of mitotic cell cycle4.92E-04
31GO:2000037: regulation of stomatal complex patterning5.88E-04
32GO:0000082: G1/S transition of mitotic cell cycle6.87E-04
33GO:0010444: guard mother cell differentiation6.87E-04
34GO:0000712: resolution of meiotic recombination intermediates6.87E-04
35GO:0046620: regulation of organ growth7.90E-04
36GO:0001522: pseudouridine synthesis7.90E-04
37GO:0032875: regulation of DNA endoreduplication7.90E-04
38GO:0009835: fruit ripening1.01E-03
39GO:0007346: regulation of mitotic cell cycle1.12E-03
40GO:0009740: gibberellic acid mediated signaling pathway1.13E-03
41GO:0051026: chiasma assembly1.24E-03
42GO:0006259: DNA metabolic process1.24E-03
43GO:0006265: DNA topological change1.36E-03
44GO:0048229: gametophyte development1.36E-03
45GO:0000266: mitochondrial fission1.49E-03
46GO:0006312: mitotic recombination1.49E-03
47GO:0055046: microgametogenesis1.62E-03
48GO:0051301: cell division1.66E-03
49GO:0040008: regulation of growth1.95E-03
50GO:0006071: glycerol metabolic process2.04E-03
51GO:0080147: root hair cell development2.18E-03
52GO:0010026: trichome differentiation2.33E-03
53GO:0007017: microtubule-based process2.33E-03
54GO:0048278: vesicle docking2.48E-03
55GO:0009693: ethylene biosynthetic process2.80E-03
56GO:0008284: positive regulation of cell proliferation3.13E-03
57GO:0009741: response to brassinosteroid3.47E-03
58GO:0007049: cell cycle3.49E-03
59GO:0061025: membrane fusion3.64E-03
60GO:0007059: chromosome segregation3.64E-03
61GO:0071281: cellular response to iron ion4.37E-03
62GO:0006906: vesicle fusion5.55E-03
63GO:0015995: chlorophyll biosynthetic process5.76E-03
64GO:0000160: phosphorelay signal transduction system6.39E-03
65GO:0006631: fatty acid metabolic process8.21E-03
66GO:0006887: exocytosis8.21E-03
67GO:0009926: auxin polar transport8.68E-03
68GO:0009736: cytokinin-activated signaling pathway1.07E-02
69GO:0051726: regulation of cell cycle1.43E-02
70GO:0009742: brassinosteroid mediated signaling pathway1.43E-02
71GO:0009058: biosynthetic process1.67E-02
72GO:0006633: fatty acid biosynthetic process1.89E-02
73GO:0045490: pectin catabolic process2.02E-02
74GO:0010468: regulation of gene expression2.29E-02
75GO:0009733: response to auxin2.31E-02
76GO:0009826: unidimensional cell growth2.69E-02
77GO:0009723: response to ethylene3.06E-02
78GO:0005975: carbohydrate metabolic process3.12E-02
79GO:0015979: photosynthesis3.54E-02
80GO:0045454: cell redox homeostasis3.66E-02
81GO:0006886: intracellular protein transport3.74E-02
82GO:0007275: multicellular organism development4.03E-02
83GO:0006629: lipid metabolic process4.25E-02
84GO:0007165: signal transduction4.26E-02
85GO:0048364: root development4.38E-02
86GO:0006468: protein phosphorylation4.76E-02
RankGO TermAdjusted P value
1GO:0047661: amino-acid racemase activity0.00E+00
2GO:0008017: microtubule binding1.05E-05
3GO:0008569: ATP-dependent microtubule motor activity, minus-end-directed3.64E-05
4GO:0009374: biotin binding3.64E-05
5GO:0003777: microtubule motor activity5.99E-05
6GO:0035175: histone kinase activity (H3-S10 specific)9.09E-05
7GO:0016630: protochlorophyllide reductase activity9.09E-05
8GO:0070330: aromatase activity1.58E-04
9GO:0017150: tRNA dihydrouridine synthase activity1.58E-04
10GO:0003916: DNA topoisomerase activity2.33E-04
11GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed3.14E-04
12GO:0018685: alkane 1-monooxygenase activity4.01E-04
13GO:0003989: acetyl-CoA carboxylase activity4.01E-04
14GO:0030332: cyclin binding4.92E-04
15GO:0030674: protein binding, bridging7.90E-04
16GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity7.90E-04
17GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity8.97E-04
18GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity8.97E-04
19GO:0008889: glycerophosphodiester phosphodiesterase activity1.01E-03
20GO:0004650: polygalacturonase activity1.10E-03
21GO:0005089: Rho guanyl-nucleotide exchange factor activity1.36E-03
22GO:0009982: pseudouridine synthase activity1.62E-03
23GO:0008094: DNA-dependent ATPase activity2.48E-03
24GO:0019706: protein-cysteine S-palmitoyltransferase activity2.48E-03
25GO:0030570: pectate lyase activity2.80E-03
26GO:0000156: phosphorelay response regulator activity4.37E-03
27GO:0051015: actin filament binding4.37E-03
28GO:0046983: protein dimerization activity5.23E-03
29GO:0009055: electron carrier activity6.10E-03
30GO:0004693: cyclin-dependent protein serine/threonine kinase activity6.61E-03
31GO:0000149: SNARE binding7.74E-03
32GO:0005484: SNAP receptor activity8.68E-03
33GO:0005515: protein binding1.23E-02
34GO:0015035: protein disulfide oxidoreductase activity1.40E-02
35GO:0016829: lyase activity1.70E-02
36GO:0030170: pyridoxal phosphate binding1.73E-02
37GO:0003824: catalytic activity2.25E-02
38GO:0042802: identical protein binding2.40E-02
39GO:0004672: protein kinase activity3.02E-02
40GO:0050660: flavin adenine dinucleotide binding3.06E-02
41GO:0005524: ATP binding3.72E-02
42GO:0003924: GTPase activity4.25E-02
RankGO TermAdjusted P value
1GO:0005872: minus-end kinesin complex0.00E+00
2GO:0009524: phragmoplast5.41E-06
3GO:0000777: condensed chromosome kinetochore6.19E-06
4GO:0005876: spindle microtubule2.32E-05
5GO:0000796: condensin complex3.64E-05
6GO:0000780: condensed nuclear chromosome, centromeric region9.09E-05
7GO:0051233: spindle midzone9.09E-05
8GO:0032133: chromosome passenger complex9.09E-05
9GO:0005871: kinesin complex1.43E-04
10GO:0009317: acetyl-CoA carboxylase complex1.58E-04
11GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)3.14E-04
12GO:0005828: kinetochore microtubule3.14E-04
13GO:0030286: dynein complex3.14E-04
14GO:0000776: kinetochore4.01E-04
15GO:0005874: microtubule4.32E-04
16GO:0000793: condensed chromosome4.92E-04
17GO:0010369: chromocenter5.88E-04
18GO:0000794: condensed nuclear chromosome6.87E-04
19GO:0000307: cyclin-dependent protein kinase holoenzyme complex8.97E-04
20GO:0005884: actin filament1.36E-03
21GO:0030659: cytoplasmic vesicle membrane1.76E-03
22GO:0009504: cell plate3.82E-03
23GO:0031965: nuclear membrane3.82E-03
24GO:0005819: spindle7.74E-03
25GO:0031201: SNARE complex8.21E-03
26GO:0005856: cytoskeleton9.42E-03
27GO:0005635: nuclear envelope1.12E-02
28GO:0012505: endomembrane system1.34E-02
29GO:0031225: anchored component of membrane1.58E-02
30GO:0046658: anchored component of plasma membrane2.47E-02
31GO:0005737: cytoplasm2.54E-02
32GO:0005789: endoplasmic reticulum membrane3.14E-02
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Gene type



Gene DE type