co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G55730

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1904526: regulation of microtubule binding	0.00E+00
2	GO:0010451: floral meristem growth	0.00E+00
3	GO:0019593: mannitol biosynthetic process	0.00E+00
4	GO:0035437: maintenance of protein localization in endoplasmic reticulum	0.00E+00
5	GO:0010378: temperature compensation of the circadian clock	0.00E+00
6	GO:0010432: bract development	0.00E+00
7	GO:0090627: plant epidermal cell differentiation	0.00E+00
8	GO:0010025: wax biosynthetic process	4.95E-08
9	GO:0006633: fatty acid biosynthetic process	1.06E-07
10	GO:0000038: very long-chain fatty acid metabolic process	6.34E-07
11	GO:0009409: response to cold	1.77E-06
12	GO:0009631: cold acclimation	7.14E-06
13	GO:0070417: cellular response to cold	1.13E-05
14	GO:0042335: cuticle development	1.34E-05
15	GO:0006631: fatty acid metabolic process	1.39E-05
16	GO:0009737: response to abscisic acid	1.58E-05
17	GO:0010143: cutin biosynthetic process	5.99E-05
18	GO:0009913: epidermal cell differentiation	1.25E-04
19	GO:0045926: negative regulation of growth	1.71E-04
20	GO:0045490: pectin catabolic process	2.37E-04
21	GO:0080051: cutin transport	2.87E-04
22	GO:0009609: response to symbiotic bacterium	2.87E-04
23	GO:0009809: lignin biosynthetic process	3.32E-04
24	GO:0042545: cell wall modification	5.51E-04
25	GO:0009873: ethylene-activated signaling pathway	6.02E-04
26	GO:1901679: nucleotide transmembrane transport	6.30E-04
27	GO:0015786: UDP-glucose transport	6.30E-04
28	GO:0031407: oxylipin metabolic process	6.30E-04
29	GO:0010289: homogalacturonan biosynthetic process	6.30E-04
30	GO:0015908: fatty acid transport	6.30E-04
31	GO:0006898: receptor-mediated endocytosis	6.30E-04
32	GO:0010115: regulation of abscisic acid biosynthetic process	6.30E-04
33	GO:0030148: sphingolipid biosynthetic process	6.69E-04
34	GO:0016045: detection of bacterium	1.02E-03
35	GO:0010359: regulation of anion channel activity	1.02E-03
36	GO:0010288: response to lead ion	1.02E-03
37	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	1.02E-03
38	GO:0015783: GDP-fucose transport	1.02E-03
39	GO:0010325: raffinose family oligosaccharide biosynthetic process	1.02E-03
40	GO:0080121: AMP transport	1.02E-03
41	GO:0044210: 'de novo' CTP biosynthetic process	1.02E-03
42	GO:0009637: response to blue light	1.08E-03
43	GO:0070588: calcium ion transmembrane transport	1.09E-03
44	GO:0009416: response to light stimulus	1.13E-03
45	GO:0009833: plant-type primary cell wall biogenesis	1.21E-03
46	GO:0009414: response to water deprivation	1.31E-03
47	GO:1901332: negative regulation of lateral root development	1.46E-03
48	GO:0006624: vacuolar protein processing	1.46E-03
49	GO:1901000: regulation of response to salt stress	1.46E-03
50	GO:0072334: UDP-galactose transmembrane transport	1.46E-03
51	GO:0030100: regulation of endocytosis	1.46E-03
52	GO:0006470: protein dephosphorylation	1.61E-03
53	GO:0001944: vasculature development	1.93E-03
54	GO:0010222: stem vascular tissue pattern formation	1.96E-03
55	GO:0046345: abscisic acid catabolic process	1.96E-03
56	GO:0051365: cellular response to potassium ion starvation	1.96E-03
57	GO:0022622: root system development	1.96E-03
58	GO:0006552: leucine catabolic process	1.96E-03
59	GO:0071585: detoxification of cadmium ion	1.96E-03
60	GO:0015867: ATP transport	1.96E-03
61	GO:0042631: cellular response to water deprivation	2.45E-03
62	GO:0006461: protein complex assembly	2.50E-03
63	GO:0006665: sphingolipid metabolic process	2.50E-03
64	GO:0048578: positive regulation of long-day photoperiodism, flowering	2.50E-03
65	GO:0009823: cytokinin catabolic process	2.50E-03
66	GO:0006656: phosphatidylcholine biosynthetic process	2.50E-03
67	GO:0009697: salicylic acid biosynthetic process	2.50E-03
68	GO:0045489: pectin biosynthetic process	2.64E-03
69	GO:0006970: response to osmotic stress	2.87E-03
70	GO:1900425: negative regulation of defense response to bacterium	3.08E-03
71	GO:0006574: valine catabolic process	3.08E-03
72	GO:0006751: glutathione catabolic process	3.08E-03
73	GO:0015866: ADP transport	3.08E-03
74	GO:0045962: positive regulation of development, heterochronic	3.08E-03
75	GO:0035435: phosphate ion transmembrane transport	3.08E-03
76	GO:0000302: response to reactive oxygen species	3.26E-03
77	GO:0009624: response to nematode	3.40E-03
78	GO:0006355: regulation of transcription, DNA-templated	3.42E-03
79	GO:0009082: branched-chain amino acid biosynthetic process	3.71E-03
80	GO:0098655: cation transmembrane transport	3.71E-03
81	GO:0010555: response to mannitol	3.71E-03
82	GO:0080086: stamen filament development	3.71E-03
83	GO:0071470: cellular response to osmotic stress	3.71E-03
84	GO:0042372: phylloquinone biosynthetic process	3.71E-03
85	GO:0019760: glucosinolate metabolic process	3.94E-03
86	GO:1902074: response to salt	4.38E-03
87	GO:0010103: stomatal complex morphogenesis	4.38E-03
88	GO:0032880: regulation of protein localization	4.38E-03
89	GO:0030497: fatty acid elongation	4.38E-03
90	GO:0050829: defense response to Gram-negative bacterium	4.38E-03
91	GO:0009611: response to wounding	4.41E-03
92	GO:0071555: cell wall organization	4.56E-03
93	GO:0009911: positive regulation of flower development	4.70E-03
94	GO:0010029: regulation of seed germination	4.97E-03
95	GO:0009690: cytokinin metabolic process	5.08E-03
96	GO:0009415: response to water	5.08E-03
97	GO:0009704: de-etiolation	5.08E-03
98	GO:2000070: regulation of response to water deprivation	5.08E-03
99	GO:0007155: cell adhesion	5.08E-03
100	GO:0008610: lipid biosynthetic process	5.08E-03
101	GO:0035265: organ growth	5.08E-03
102	GO:0009819: drought recovery	5.08E-03
103	GO:0042255: ribosome assembly	5.08E-03
104	GO:0006353: DNA-templated transcription, termination	5.08E-03
105	GO:0009827: plant-type cell wall modification	5.82E-03
106	GO:0030244: cellulose biosynthetic process	6.14E-03
107	GO:0010345: suberin biosynthetic process	6.60E-03
108	GO:0098656: anion transmembrane transport	6.60E-03
109	GO:0006098: pentose-phosphate shunt	6.60E-03
110	GO:0090305: nucleic acid phosphodiester bond hydrolysis	6.60E-03
111	GO:0010150: leaf senescence	6.82E-03
112	GO:0007623: circadian rhythm	6.82E-03
113	GO:0009651: response to salt stress	7.32E-03
114	GO:0009638: phototropism	7.41E-03
115	GO:0042761: very long-chain fatty acid biosynthetic process	7.41E-03
116	GO:2000280: regulation of root development	7.41E-03
117	GO:0006949: syncytium formation	8.26E-03
118	GO:0052544: defense response by callose deposition in cell wall	9.14E-03
119	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.01E-02
120	GO:0016024: CDP-diacylglycerol biosynthetic process	1.01E-02
121	GO:0010582: floral meristem determinacy	1.01E-02
122	GO:0018107: peptidyl-threonine phosphorylation	1.10E-02
123	GO:0009725: response to hormone	1.10E-02
124	GO:0005986: sucrose biosynthetic process	1.10E-02
125	GO:0010588: cotyledon vascular tissue pattern formation	1.10E-02
126	GO:2000012: regulation of auxin polar transport	1.10E-02
127	GO:0010102: lateral root morphogenesis	1.10E-02
128	GO:0006351: transcription, DNA-templated	1.14E-02
129	GO:0010540: basipetal auxin transport	1.20E-02
130	GO:0042538: hyperosmotic salinity response	1.26E-02
131	GO:0009908: flower development	1.32E-02
132	GO:0006636: unsaturated fatty acid biosynthetic process	1.40E-02
133	GO:0051603: proteolysis involved in cellular protein catabolic process	1.41E-02
134	GO:0080167: response to karrikin	1.56E-02
135	GO:0010200: response to chitin	1.63E-02
136	GO:0009269: response to desiccation	1.73E-02
137	GO:0031408: oxylipin biosynthetic process	1.73E-02
138	GO:0009733: response to auxin	1.77E-02
139	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.96E-02
140	GO:0055085: transmembrane transport	2.19E-02
141	GO:0008284: positive regulation of cell proliferation	2.21E-02
142	GO:0000226: microtubule cytoskeleton organization	2.33E-02
143	GO:0048868: pollen tube development	2.46E-02
144	GO:0010268: brassinosteroid homeostasis	2.46E-02
145	GO:0009958: positive gravitropism	2.46E-02
146	GO:0009751: response to salicylic acid	2.51E-02
147	GO:0009058: biosynthetic process	2.56E-02
148	GO:0042752: regulation of circadian rhythm	2.59E-02
149	GO:0048825: cotyledon development	2.72E-02
150	GO:0010183: pollen tube guidance	2.72E-02
151	GO:0016132: brassinosteroid biosynthetic process	2.86E-02
152	GO:0055114: oxidation-reduction process	2.88E-02
153	GO:0032502: developmental process	3.00E-02
154	GO:0009630: gravitropism	3.00E-02
155	GO:0010090: trichome morphogenesis	3.13E-02
156	GO:0009828: plant-type cell wall loosening	3.28E-02
157	GO:0016125: sterol metabolic process	3.28E-02
158	GO:0010252: auxin homeostasis	3.28E-02
159	GO:0009639: response to red or far red light	3.28E-02
160	GO:0006904: vesicle docking involved in exocytosis	3.42E-02
161	GO:0050832: defense response to fungus	3.66E-02
162	GO:0009739: response to gibberellin	3.74E-02
163	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.86E-02
164	GO:0009734: auxin-activated signaling pathway	3.91E-02
165	GO:0010468: regulation of gene expression	3.99E-02
166	GO:0006979: response to oxidative stress	4.38E-02
167	GO:0018298: protein-chromophore linkage	4.49E-02
168	GO:0009832: plant-type cell wall biogenesis	4.65E-02
169	GO:0048767: root hair elongation	4.65E-02
170	GO:0010311: lateral root formation	4.65E-02
171	GO:0010218: response to far red light	4.81E-02
172	GO:0009834: plant-type secondary cell wall biogenesis	4.81E-02
173	GO:0006811: ion transport	4.81E-02
174	GO:0030154: cell differentiation	4.89E-02
175	GO:0009826: unidimensional cell growth	4.96E-02
176	GO:0007568: aging	4.97E-02
177	GO:0048527: lateral root development	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0052631: sphingolipid delta-8 desaturase activity	0.00E+00
2	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	6.77E-10
3	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	6.77E-10
4	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	6.77E-10
5	GO:0070330: aromatase activity	2.68E-08
6	GO:0018685: alkane 1-monooxygenase activity	8.57E-07
7	GO:0009922: fatty acid elongase activity	8.57E-07
8	GO:0052747: sinapyl alcohol dehydrogenase activity	7.06E-06
9	GO:0003883: CTP synthase activity	3.03E-05
10	GO:0045551: cinnamyl-alcohol dehydrogenase activity	4.01E-05
11	GO:0043565: sequence-specific DNA binding	1.66E-04
12	GO:0008909: isochorismate synthase activity	2.87E-04
13	GO:0015245: fatty acid transporter activity	2.87E-04
14	GO:0004105: choline-phosphate cytidylyltransferase activity	2.87E-04
15	GO:0005534: galactose binding	2.87E-04
16	GO:0031957: very long-chain fatty acid-CoA ligase activity	2.87E-04
17	GO:0045330: aspartyl esterase activity	3.91E-04
18	GO:0030599: pectinesterase activity	5.26E-04
19	GO:0016746: transferase activity, transferring acyl groups	6.04E-04
20	GO:0016629: 12-oxophytodienoate reductase activity	6.30E-04
21	GO:0001047: core promoter binding	6.30E-04
22	GO:0042389: omega-3 fatty acid desaturase activity	6.30E-04
23	GO:0017040: ceramidase activity	6.30E-04
24	GO:0003839: gamma-glutamylcyclotransferase activity	6.30E-04
25	GO:0005457: GDP-fucose transmembrane transporter activity	1.02E-03
26	GO:0047274: galactinol-sucrose galactosyltransferase activity	1.02E-03
27	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	1.02E-03
28	GO:0005460: UDP-glucose transmembrane transporter activity	1.46E-03
29	GO:0052656: L-isoleucine transaminase activity	1.46E-03
30	GO:0052654: L-leucine transaminase activity	1.46E-03
31	GO:0052655: L-valine transaminase activity	1.46E-03
32	GO:0004084: branched-chain-amino-acid transaminase activity	1.96E-03
33	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.50E-03
34	GO:0005459: UDP-galactose transmembrane transporter activity	2.50E-03
35	GO:0019139: cytokinin dehydrogenase activity	2.50E-03
36	GO:0080122: AMP transmembrane transporter activity	2.50E-03
37	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	3.08E-03
38	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	3.08E-03
39	GO:0005347: ATP transmembrane transporter activity	3.71E-03
40	GO:0015217: ADP transmembrane transporter activity	3.71E-03
41	GO:0102391: decanoate--CoA ligase activity	3.71E-03
42	GO:0004467: long-chain fatty acid-CoA ligase activity	4.38E-03
43	GO:0016621: cinnamoyl-CoA reductase activity	4.38E-03
44	GO:0009881: photoreceptor activity	4.38E-03
45	GO:0016209: antioxidant activity	5.08E-03
46	GO:0004722: protein serine/threonine phosphatase activity	5.38E-03
47	GO:0003700: transcription factor activity, sequence-specific DNA binding	5.62E-03
48	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	5.82E-03
49	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	5.83E-03
50	GO:0046910: pectinesterase inhibitor activity	6.23E-03
51	GO:0009672: auxin:proton symporter activity	7.41E-03
52	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	9.25E-03
53	GO:0005262: calcium channel activity	1.10E-02
54	GO:0015114: phosphate ion transmembrane transporter activity	1.10E-02
55	GO:0005388: calcium-transporting ATPase activity	1.10E-02
56	GO:0010329: auxin efflux transmembrane transporter activity	1.10E-02
57	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.20E-02
58	GO:0008083: growth factor activity	1.20E-02
59	GO:0008146: sulfotransferase activity	1.30E-02
60	GO:0044212: transcription regulatory region DNA binding	1.45E-02
61	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.85E-02
62	GO:0016760: cellulose synthase (UDP-forming) activity	1.96E-02
63	GO:0030570: pectate lyase activity	1.96E-02
64	GO:0003727: single-stranded RNA binding	2.08E-02
65	GO:0018024: histone-lysine N-methyltransferase activity	2.21E-02
66	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.32E-02
67	GO:0010181: FMN binding	2.59E-02
68	GO:0019825: oxygen binding	2.60E-02
69	GO:0004872: receptor activity	2.72E-02
70	GO:0004197: cysteine-type endopeptidase activity	3.00E-02
71	GO:0004518: nuclease activity	3.00E-02
72	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.12E-02
73	GO:0016759: cellulose synthase activity	3.28E-02
74	GO:0016791: phosphatase activity	3.28E-02
75	GO:0016413: O-acetyltransferase activity	3.57E-02
76	GO:0005506: iron ion binding	4.23E-02
77	GO:0005096: GTPase activator activity	4.65E-02
78	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0031357: integral component of chloroplast inner membrane	3.77E-06
2	GO:0042170: plastid membrane	6.30E-04
3	GO:0009505: plant-type cell wall	7.07E-04
4	GO:0009897: external side of plasma membrane	1.02E-03
5	GO:0005783: endoplasmic reticulum	1.29E-03
6	GO:0005615: extracellular space	1.56E-03
7	GO:0016021: integral component of membrane	1.59E-03
8	GO:0005618: cell wall	1.60E-03
9	GO:0005798: Golgi-associated vesicle	3.08E-03
10	GO:0005789: endoplasmic reticulum membrane	3.50E-03
11	GO:0071944: cell periphery	3.71E-03
12	GO:0046658: anchored component of plasma membrane	9.75E-03
13	GO:0009508: plastid chromosome	1.10E-02
14	GO:0005886: plasma membrane	1.35E-02
15	GO:0005769: early endosome	1.40E-02
16	GO:0000145: exocyst	3.00E-02
17	GO:0005694: chromosome	3.00E-02
18	GO:0005778: peroxisomal membrane	3.42E-02
19	GO:0009295: nucleoid	3.42E-02
20	GO:0005622: intracellular	3.59E-02
21	GO:0005768: endosome	3.72E-02
22	GO:0005788: endoplasmic reticulum lumen	3.86E-02