Gene: AT5G48220
Gene description
TAIR ID: AT5G48220
Short description: Aldolase-type TIM barrel family protein
Pathogen responsiveness: -0.57
General responsiveness: 0.70
GO biological process
tryptophan metabolic process
GO cellular component
chloroplast, chloroplast stroma, mitochondrion, chloroplast thylakoid
GO molecular function
indole-3-glycerol-phosphate synthase activity
Metabolic pathway
COMPLETE-ARO-ARA-PWY: superpathway of phenylalanine, tyrosine and tryptophan biosynthesis
TRPSYN-PWY: tryptophan biosynthesis
KEGG pathway
PATH:ath01230: Biosynthesis of amino acids
PATH:ath00400: Phenylalanine, tyrosine and tryptophan biosynthesis
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
8 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | -1.65 | 7.68E-06 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | -1.99 | 1.83E-10 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -1.81 | 1.41E-13 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | -1.55 | 1.38E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | -1.53 | 1.35E-12 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | -1.56 | 1.37E-12 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | -1.56 | 3.21E-06 |
| GSE5520 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | -1.72 | 2.06E-08 |
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