GO Enrichment Analysis of Co-expressed Genes with
AT5G44650
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0098586: cellular response to virus | 0.00E+00 |
| 3 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 4 | GO:0051246: regulation of protein metabolic process | 0.00E+00 |
| 5 | GO:0008298: intracellular mRNA localization | 0.00E+00 |
| 6 | GO:0080005: photosystem stoichiometry adjustment | 5.31E-07 |
| 7 | GO:0010190: cytochrome b6f complex assembly | 2.28E-05 |
| 8 | GO:0015979: photosynthesis | 5.63E-05 |
| 9 | GO:0009657: plastid organization | 7.24E-05 |
| 10 | GO:0010362: negative regulation of anion channel activity by blue light | 1.00E-04 |
| 11 | GO:0010322: regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.00E-04 |
| 12 | GO:0031426: polycistronic mRNA processing | 1.00E-04 |
| 13 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.00E-04 |
| 14 | GO:1904964: positive regulation of phytol biosynthetic process | 1.00E-04 |
| 15 | GO:0042371: vitamin K biosynthetic process | 1.00E-04 |
| 16 | GO:0071461: cellular response to redox state | 1.00E-04 |
| 17 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.00E-04 |
| 18 | GO:0018298: protein-chromophore linkage | 1.15E-04 |
| 19 | GO:0010207: photosystem II assembly | 2.31E-04 |
| 20 | GO:0046741: transport of virus in host, tissue to tissue | 2.36E-04 |
| 21 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.36E-04 |
| 22 | GO:0034755: iron ion transmembrane transport | 2.36E-04 |
| 23 | GO:0009735: response to cytokinin | 2.59E-04 |
| 24 | GO:0009658: chloroplast organization | 2.67E-04 |
| 25 | GO:0006013: mannose metabolic process | 3.92E-04 |
| 26 | GO:0090391: granum assembly | 3.92E-04 |
| 27 | GO:0006696: ergosterol biosynthetic process | 3.92E-04 |
| 28 | GO:0016117: carotenoid biosynthetic process | 5.51E-04 |
| 29 | GO:0010239: chloroplast mRNA processing | 5.64E-04 |
| 30 | GO:0006809: nitric oxide biosynthetic process | 5.64E-04 |
| 31 | GO:0033014: tetrapyrrole biosynthetic process | 5.64E-04 |
| 32 | GO:0050482: arachidonic acid secretion | 5.64E-04 |
| 33 | GO:0043572: plastid fission | 5.64E-04 |
| 34 | GO:2001141: regulation of RNA biosynthetic process | 5.64E-04 |
| 35 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 5.64E-04 |
| 36 | GO:0009791: post-embryonic development | 7.34E-04 |
| 37 | GO:0009765: photosynthesis, light harvesting | 7.50E-04 |
| 38 | GO:0009902: chloroplast relocation | 7.50E-04 |
| 39 | GO:0016123: xanthophyll biosynthetic process | 9.47E-04 |
| 40 | GO:0016120: carotene biosynthetic process | 9.47E-04 |
| 41 | GO:0045038: protein import into chloroplast thylakoid membrane | 9.47E-04 |
| 42 | GO:0010027: thylakoid membrane organization | 1.11E-03 |
| 43 | GO:0009643: photosynthetic acclimation | 1.16E-03 |
| 44 | GO:0050665: hydrogen peroxide biosynthetic process | 1.16E-03 |
| 45 | GO:0015995: chlorophyll biosynthetic process | 1.30E-03 |
| 46 | GO:0009854: oxidative photosynthetic carbon pathway | 1.38E-03 |
| 47 | GO:0010019: chloroplast-nucleus signaling pathway | 1.38E-03 |
| 48 | GO:0009772: photosynthetic electron transport in photosystem II | 1.62E-03 |
| 49 | GO:0006644: phospholipid metabolic process | 1.87E-03 |
| 50 | GO:0048564: photosystem I assembly | 1.87E-03 |
| 51 | GO:0000105: histidine biosynthetic process | 1.87E-03 |
| 52 | GO:0071482: cellular response to light stimulus | 2.14E-03 |
| 53 | GO:0032544: plastid translation | 2.14E-03 |
| 54 | GO:0048507: meristem development | 2.41E-03 |
| 55 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 2.41E-03 |
| 56 | GO:0006783: heme biosynthetic process | 2.41E-03 |
| 57 | GO:0000373: Group II intron splicing | 2.41E-03 |
| 58 | GO:0009644: response to high light intensity | 2.51E-03 |
| 59 | GO:0009638: phototropism | 2.70E-03 |
| 60 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.70E-03 |
| 61 | GO:0009098: leucine biosynthetic process | 2.70E-03 |
| 62 | GO:0006259: DNA metabolic process | 3.00E-03 |
| 63 | GO:0045036: protein targeting to chloroplast | 3.00E-03 |
| 64 | GO:0009773: photosynthetic electron transport in photosystem I | 3.31E-03 |
| 65 | GO:0006265: DNA topological change | 3.31E-03 |
| 66 | GO:0043085: positive regulation of catalytic activity | 3.31E-03 |
| 67 | GO:0006879: cellular iron ion homeostasis | 3.31E-03 |
| 68 | GO:0006352: DNA-templated transcription, initiation | 3.31E-03 |
| 69 | GO:0009767: photosynthetic electron transport chain | 3.95E-03 |
| 70 | GO:0005986: sucrose biosynthetic process | 3.95E-03 |
| 71 | GO:0010020: chloroplast fission | 4.30E-03 |
| 72 | GO:0090351: seedling development | 4.64E-03 |
| 73 | GO:0051302: regulation of cell division | 5.75E-03 |
| 74 | GO:0006418: tRNA aminoacylation for protein translation | 5.75E-03 |
| 75 | GO:0007017: microtubule-based process | 5.75E-03 |
| 76 | GO:0016226: iron-sulfur cluster assembly | 6.54E-03 |
| 77 | GO:0055114: oxidation-reduction process | 6.75E-03 |
| 78 | GO:0009306: protein secretion | 7.35E-03 |
| 79 | GO:0007623: circadian rhythm | 7.61E-03 |
| 80 | GO:0010118: stomatal movement | 8.21E-03 |
| 81 | GO:0010468: regulation of gene expression | 9.09E-03 |
| 82 | GO:0007059: chromosome segregation | 9.10E-03 |
| 83 | GO:0015986: ATP synthesis coupled proton transport | 9.10E-03 |
| 84 | GO:0010193: response to ozone | 1.00E-02 |
| 85 | GO:0000302: response to reactive oxygen species | 1.00E-02 |
| 86 | GO:0019761: glucosinolate biosynthetic process | 1.05E-02 |
| 87 | GO:0030163: protein catabolic process | 1.10E-02 |
| 88 | GO:0009816: defense response to bacterium, incompatible interaction | 1.35E-02 |
| 89 | GO:0080167: response to karrikin | 1.47E-02 |
| 90 | GO:0048481: plant ovule development | 1.57E-02 |
| 91 | GO:0046777: protein autophosphorylation | 1.57E-02 |
| 92 | GO:0000160: phosphorelay signal transduction system | 1.62E-02 |
| 93 | GO:0007568: aging | 1.74E-02 |
| 94 | GO:0009637: response to blue light | 1.86E-02 |
| 95 | GO:0010114: response to red light | 2.22E-02 |
| 96 | GO:0009744: response to sucrose | 2.22E-02 |
| 97 | GO:0006364: rRNA processing | 2.75E-02 |
| 98 | GO:0009409: response to cold | 2.90E-02 |
| 99 | GO:0006417: regulation of translation | 2.95E-02 |
| 100 | GO:0046686: response to cadmium ion | 3.45E-02 |
| 101 | GO:0006396: RNA processing | 3.61E-02 |
| 102 | GO:0009416: response to light stimulus | 3.84E-02 |
| 103 | GO:0055085: transmembrane transport | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 2 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 3 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 4 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 5 | GO:0019899: enzyme binding | 4.38E-05 |
| 6 | GO:0046906: tetrapyrrole binding | 1.00E-04 |
| 7 | GO:0004325: ferrochelatase activity | 1.00E-04 |
| 8 | GO:0051996: squalene synthase activity | 1.00E-04 |
| 9 | GO:0004830: tryptophan-tRNA ligase activity | 1.00E-04 |
| 10 | GO:0003879: ATP phosphoribosyltransferase activity | 1.00E-04 |
| 11 | GO:0030941: chloroplast targeting sequence binding | 1.00E-04 |
| 12 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 2.36E-04 |
| 13 | GO:0003862: 3-isopropylmalate dehydrogenase activity | 2.36E-04 |
| 14 | GO:0004180: carboxypeptidase activity | 3.92E-04 |
| 15 | GO:0003913: DNA photolyase activity | 3.92E-04 |
| 16 | GO:0032947: protein complex scaffold | 3.92E-04 |
| 17 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 3.92E-04 |
| 18 | GO:0050307: sucrose-phosphate phosphatase activity | 3.92E-04 |
| 19 | GO:0022891: substrate-specific transmembrane transporter activity | 4.69E-04 |
| 20 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 5.64E-04 |
| 21 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 5.64E-04 |
| 22 | GO:0048027: mRNA 5'-UTR binding | 5.64E-04 |
| 23 | GO:0016851: magnesium chelatase activity | 5.64E-04 |
| 24 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 5.64E-04 |
| 25 | GO:0009882: blue light photoreceptor activity | 5.64E-04 |
| 26 | GO:0008080: N-acetyltransferase activity | 6.40E-04 |
| 27 | GO:0010181: FMN binding | 6.86E-04 |
| 28 | GO:0001053: plastid sigma factor activity | 7.50E-04 |
| 29 | GO:0051861: glycolipid binding | 7.50E-04 |
| 30 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 7.50E-04 |
| 31 | GO:0016987: sigma factor activity | 7.50E-04 |
| 32 | GO:0043495: protein anchor | 7.50E-04 |
| 33 | GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 7.50E-04 |
| 34 | GO:0008891: glycolate oxidase activity | 7.50E-04 |
| 35 | GO:0048038: quinone binding | 7.83E-04 |
| 36 | GO:0004623: phospholipase A2 activity | 9.47E-04 |
| 37 | GO:0016168: chlorophyll binding | 1.17E-03 |
| 38 | GO:0004559: alpha-mannosidase activity | 1.38E-03 |
| 39 | GO:0042802: identical protein binding | 1.43E-03 |
| 40 | GO:0000287: magnesium ion binding | 1.78E-03 |
| 41 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 2.14E-03 |
| 42 | GO:0071949: FAD binding | 2.41E-03 |
| 43 | GO:0005381: iron ion transmembrane transporter activity | 2.70E-03 |
| 44 | GO:0031072: heat shock protein binding | 3.95E-03 |
| 45 | GO:0000155: phosphorelay sensor kinase activity | 3.95E-03 |
| 46 | GO:0005506: iron ion binding | 4.61E-03 |
| 47 | GO:0051536: iron-sulfur cluster binding | 5.37E-03 |
| 48 | GO:0016491: oxidoreductase activity | 7.18E-03 |
| 49 | GO:0003727: single-stranded RNA binding | 7.35E-03 |
| 50 | GO:0004812: aminoacyl-tRNA ligase activity | 7.78E-03 |
| 51 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 8.65E-03 |
| 52 | GO:0016853: isomerase activity | 9.10E-03 |
| 53 | GO:0004518: nuclease activity | 1.05E-02 |
| 54 | GO:0016597: amino acid binding | 1.25E-02 |
| 55 | GO:0008236: serine-type peptidase activity | 1.51E-02 |
| 56 | GO:0009055: electron carrier activity | 2.33E-02 |
| 57 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.35E-02 |
| 58 | GO:0043621: protein self-association | 2.35E-02 |
| 59 | GO:0005198: structural molecule activity | 2.41E-02 |
| 60 | GO:0051287: NAD binding | 2.55E-02 |
| 61 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.75E-02 |
| 62 | GO:0003777: microtubule motor activity | 2.95E-02 |
| 63 | GO:0051082: unfolded protein binding | 3.53E-02 |
| 64 | GO:0016746: transferase activity, transferring acyl groups | 3.61E-02 |
| 65 | GO:0019843: rRNA binding | 4.14E-02 |
| 66 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.22E-02 |
| 67 | GO:0016829: lyase activity | 4.38E-02 |
| 68 | GO:0008565: protein transporter activity | 4.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 5.74E-32 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 1.76E-21 |
| 3 | GO:0009941: chloroplast envelope | 3.88E-11 |
| 4 | GO:0009570: chloroplast stroma | 4.20E-10 |
| 5 | GO:0031969: chloroplast membrane | 2.85E-06 |
| 6 | GO:0009534: chloroplast thylakoid | 7.09E-06 |
| 7 | GO:0009579: thylakoid | 6.60E-05 |
| 8 | GO:0080085: signal recognition particle, chloroplast targeting | 2.36E-04 |
| 9 | GO:0010007: magnesium chelatase complex | 3.92E-04 |
| 10 | GO:0033281: TAT protein transport complex | 3.92E-04 |
| 11 | GO:0010287: plastoglobule | 6.66E-04 |
| 12 | GO:0009543: chloroplast thylakoid lumen | 7.13E-04 |
| 13 | GO:0009523: photosystem II | 7.34E-04 |
| 14 | GO:0030286: dynein complex | 7.50E-04 |
| 15 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 7.50E-04 |
| 16 | GO:0055035: plastid thylakoid membrane | 9.47E-04 |
| 17 | GO:0010319: stromule | 9.96E-04 |
| 18 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.16E-03 |
| 19 | GO:0009707: chloroplast outer membrane | 1.44E-03 |
| 20 | GO:0009536: plastid | 1.54E-03 |
| 21 | GO:0031359: integral component of chloroplast outer membrane | 1.62E-03 |
| 22 | GO:0009539: photosystem II reaction center | 2.14E-03 |
| 23 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 2.14E-03 |
| 24 | GO:0042644: chloroplast nucleoid | 2.41E-03 |
| 25 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.41E-03 |
| 26 | GO:0009706: chloroplast inner membrane | 4.42E-03 |
| 27 | GO:0005875: microtubule associated complex | 5.00E-03 |
| 28 | GO:0009654: photosystem II oxygen evolving complex | 5.75E-03 |
| 29 | GO:0042651: thylakoid membrane | 5.75E-03 |
| 30 | GO:0009295: nucleoid | 1.20E-02 |
| 31 | GO:0005778: peroxisomal membrane | 1.20E-02 |
| 32 | GO:0031977: thylakoid lumen | 2.10E-02 |
| 33 | GO:0031966: mitochondrial membrane | 2.61E-02 |
| 34 | GO:0005623: cell | 4.22E-02 |
| 35 | GO:0005777: peroxisome | 4.40E-02 |