Gene: AT5G39830
     


Gene description


TAIR ID: AT5G39830

Short description: Trypsin family protein with PDZ domain

Pathogen responsiveness: -0.85

General responsiveness: 0.25

GO biological process


photosystem II repair, proteolysis


GO cellular component


chloroplast thylakoid lumen, chloroplast thylakoid, thylakoid, thylakoid lumen, chloroplast


GO molecular function


peptidase activity, serine-type peptidase activity, serine-type endopeptidase activity


Protein domain


PfamPF13365, Trypsin-like peptidase domain
PfamPF13180, PDZ domain
SMARTSM00228, PDZ

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G27920, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


7 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.831.44E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.511.07E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.923.02E-11
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.642.36E-02
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.601.33E-05
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.577.97E-07
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.673.40E-13






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