GO Enrichment Analysis of Co-expressed Genes with
AT5G39830
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 2 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 3 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 4 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 5 | GO:0010480: microsporocyte differentiation | 0.00E+00 |
| 6 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 7 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 8 | GO:0009773: photosynthetic electron transport in photosystem I | 3.83E-07 |
| 9 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.31E-05 |
| 10 | GO:0006546: glycine catabolic process | 4.19E-05 |
| 11 | GO:0048437: floral organ development | 1.77E-04 |
| 12 | GO:0000476: maturation of 4.5S rRNA | 2.46E-04 |
| 13 | GO:0000967: rRNA 5'-end processing | 2.46E-04 |
| 14 | GO:0043266: regulation of potassium ion transport | 2.46E-04 |
| 15 | GO:0031338: regulation of vesicle fusion | 2.46E-04 |
| 16 | GO:0000481: maturation of 5S rRNA | 2.46E-04 |
| 17 | GO:0043087: regulation of GTPase activity | 2.46E-04 |
| 18 | GO:2000021: regulation of ion homeostasis | 2.46E-04 |
| 19 | GO:0010028: xanthophyll cycle | 2.46E-04 |
| 20 | GO:0034337: RNA folding | 2.46E-04 |
| 21 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 2.46E-04 |
| 22 | GO:0032544: plastid translation | 2.78E-04 |
| 23 | GO:0010206: photosystem II repair | 3.36E-04 |
| 24 | GO:0015995: chlorophyll biosynthetic process | 5.35E-04 |
| 25 | GO:0048229: gametophyte development | 5.39E-04 |
| 26 | GO:1900871: chloroplast mRNA modification | 5.44E-04 |
| 27 | GO:0016122: xanthophyll metabolic process | 5.44E-04 |
| 28 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 5.44E-04 |
| 29 | GO:0034470: ncRNA processing | 5.44E-04 |
| 30 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 5.44E-04 |
| 31 | GO:0046741: transport of virus in host, tissue to tissue | 5.44E-04 |
| 32 | GO:0006810: transport | 5.98E-04 |
| 33 | GO:0010075: regulation of meristem growth | 7.00E-04 |
| 34 | GO:0009934: regulation of meristem structural organization | 7.88E-04 |
| 35 | GO:0006000: fructose metabolic process | 8.83E-04 |
| 36 | GO:0006518: peptide metabolic process | 8.83E-04 |
| 37 | GO:0043617: cellular response to sucrose starvation | 8.83E-04 |
| 38 | GO:0090630: activation of GTPase activity | 8.83E-04 |
| 39 | GO:2001295: malonyl-CoA biosynthetic process | 8.83E-04 |
| 40 | GO:0008152: metabolic process | 1.23E-03 |
| 41 | GO:0016556: mRNA modification | 1.26E-03 |
| 42 | GO:0009226: nucleotide-sugar biosynthetic process | 1.26E-03 |
| 43 | GO:0043572: plastid fission | 1.26E-03 |
| 44 | GO:0061077: chaperone-mediated protein folding | 1.30E-03 |
| 45 | GO:0015846: polyamine transport | 1.68E-03 |
| 46 | GO:0010021: amylopectin biosynthetic process | 1.68E-03 |
| 47 | GO:0051781: positive regulation of cell division | 1.68E-03 |
| 48 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.68E-03 |
| 49 | GO:0045727: positive regulation of translation | 1.68E-03 |
| 50 | GO:0015994: chlorophyll metabolic process | 1.68E-03 |
| 51 | GO:0009658: chloroplast organization | 1.82E-03 |
| 52 | GO:0048653: anther development | 1.97E-03 |
| 53 | GO:0009735: response to cytokinin | 2.44E-03 |
| 54 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 2.65E-03 |
| 55 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.65E-03 |
| 56 | GO:0042549: photosystem II stabilization | 2.65E-03 |
| 57 | GO:0000470: maturation of LSU-rRNA | 2.65E-03 |
| 58 | GO:0015979: photosynthesis | 3.09E-03 |
| 59 | GO:0042026: protein refolding | 3.18E-03 |
| 60 | GO:0006458: 'de novo' protein folding | 3.18E-03 |
| 61 | GO:0009942: longitudinal axis specification | 3.18E-03 |
| 62 | GO:0010196: nonphotochemical quenching | 3.75E-03 |
| 63 | GO:0010027: thylakoid membrane organization | 3.76E-03 |
| 64 | GO:0032259: methylation | 4.28E-03 |
| 65 | GO:0032508: DNA duplex unwinding | 4.35E-03 |
| 66 | GO:0008610: lipid biosynthetic process | 4.35E-03 |
| 67 | GO:0006633: fatty acid biosynthetic process | 4.54E-03 |
| 68 | GO:0009817: defense response to fungus, incompatible interaction | 4.90E-03 |
| 69 | GO:0009657: plastid organization | 4.98E-03 |
| 70 | GO:0006002: fructose 6-phosphate metabolic process | 4.98E-03 |
| 71 | GO:0071482: cellular response to light stimulus | 4.98E-03 |
| 72 | GO:0048507: meristem development | 5.65E-03 |
| 73 | GO:0000373: Group II intron splicing | 5.65E-03 |
| 74 | GO:1900865: chloroplast RNA modification | 6.33E-03 |
| 75 | GO:0010205: photoinhibition | 6.33E-03 |
| 76 | GO:0006779: porphyrin-containing compound biosynthetic process | 6.33E-03 |
| 77 | GO:0006782: protoporphyrinogen IX biosynthetic process | 7.06E-03 |
| 78 | GO:0008285: negative regulation of cell proliferation | 7.80E-03 |
| 79 | GO:0006415: translational termination | 7.80E-03 |
| 80 | GO:1903507: negative regulation of nucleic acid-templated transcription | 7.80E-03 |
| 81 | GO:0016024: CDP-diacylglycerol biosynthetic process | 8.58E-03 |
| 82 | GO:0006855: drug transmembrane transport | 9.36E-03 |
| 83 | GO:0018107: peptidyl-threonine phosphorylation | 9.38E-03 |
| 84 | GO:0006094: gluconeogenesis | 9.38E-03 |
| 85 | GO:0009767: photosynthetic electron transport chain | 9.38E-03 |
| 86 | GO:0005986: sucrose biosynthetic process | 9.38E-03 |
| 87 | GO:0010020: chloroplast fission | 1.02E-02 |
| 88 | GO:0019253: reductive pentose-phosphate cycle | 1.02E-02 |
| 89 | GO:0010207: photosystem II assembly | 1.02E-02 |
| 90 | GO:0006364: rRNA processing | 1.08E-02 |
| 91 | GO:0005985: sucrose metabolic process | 1.11E-02 |
| 92 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.20E-02 |
| 93 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.23E-02 |
| 94 | GO:0007010: cytoskeleton organization | 1.29E-02 |
| 95 | GO:0048316: seed development | 1.32E-02 |
| 96 | GO:0016575: histone deacetylation | 1.38E-02 |
| 97 | GO:0006418: tRNA aminoacylation for protein translation | 1.38E-02 |
| 98 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.57E-02 |
| 99 | GO:0009409: response to cold | 1.65E-02 |
| 100 | GO:0009306: protein secretion | 1.77E-02 |
| 101 | GO:0000413: protein peptidyl-prolyl isomerization | 1.99E-02 |
| 102 | GO:0010051: xylem and phloem pattern formation | 1.99E-02 |
| 103 | GO:0005975: carbohydrate metabolic process | 2.01E-02 |
| 104 | GO:0010305: leaf vascular tissue pattern formation | 2.09E-02 |
| 105 | GO:0006814: sodium ion transport | 2.21E-02 |
| 106 | GO:0009646: response to absence of light | 2.21E-02 |
| 107 | GO:0009790: embryo development | 2.26E-02 |
| 108 | GO:0019252: starch biosynthetic process | 2.32E-02 |
| 109 | GO:0071554: cell wall organization or biogenesis | 2.43E-02 |
| 110 | GO:0002229: defense response to oomycetes | 2.43E-02 |
| 111 | GO:0000302: response to reactive oxygen species | 2.43E-02 |
| 112 | GO:0080156: mitochondrial mRNA modification | 2.43E-02 |
| 113 | GO:0006508: proteolysis | 2.56E-02 |
| 114 | GO:0030163: protein catabolic process | 2.67E-02 |
| 115 | GO:1901657: glycosyl compound metabolic process | 2.67E-02 |
| 116 | GO:0009451: RNA modification | 2.74E-02 |
| 117 | GO:0051607: defense response to virus | 3.04E-02 |
| 118 | GO:0009615: response to virus | 3.16E-02 |
| 119 | GO:0048481: plant ovule development | 3.82E-02 |
| 120 | GO:0042254: ribosome biogenesis | 4.21E-02 |
| 121 | GO:0007568: aging | 4.24E-02 |
| 122 | GO:0034599: cellular response to oxidative stress | 4.66E-02 |
| 123 | GO:0009723: response to ethylene | 4.76E-02 |
| 124 | GO:0006839: mitochondrial transport | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 2 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 3 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 4 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 5 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 6 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 7 | GO:0019808: polyamine binding | 0.00E+00 |
| 8 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 9 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 10 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 11 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 12 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 13 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.19E-05 |
| 14 | GO:0003867: 4-aminobutyrate transaminase activity | 2.46E-04 |
| 15 | GO:0045485: omega-6 fatty acid desaturase activity | 2.46E-04 |
| 16 | GO:0004856: xylulokinase activity | 2.46E-04 |
| 17 | GO:0016787: hydrolase activity | 4.77E-04 |
| 18 | GO:0016868: intramolecular transferase activity, phosphotransferases | 5.44E-04 |
| 19 | GO:0004047: aminomethyltransferase activity | 5.44E-04 |
| 20 | GO:0033201: alpha-1,4-glucan synthase activity | 5.44E-04 |
| 21 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 5.44E-04 |
| 22 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 5.44E-04 |
| 23 | GO:0019843: rRNA binding | 5.78E-04 |
| 24 | GO:0004222: metalloendopeptidase activity | 6.90E-04 |
| 25 | GO:0002161: aminoacyl-tRNA editing activity | 8.83E-04 |
| 26 | GO:0004075: biotin carboxylase activity | 8.83E-04 |
| 27 | GO:0030267: glyoxylate reductase (NADP) activity | 8.83E-04 |
| 28 | GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity | 8.83E-04 |
| 29 | GO:0004373: glycogen (starch) synthase activity | 8.83E-04 |
| 30 | GO:0005528: FK506 binding | 1.08E-03 |
| 31 | GO:0043621: protein self-association | 1.24E-03 |
| 32 | GO:0016851: magnesium chelatase activity | 1.26E-03 |
| 33 | GO:0048487: beta-tubulin binding | 1.26E-03 |
| 34 | GO:0016149: translation release factor activity, codon specific | 1.26E-03 |
| 35 | GO:0043023: ribosomal large subunit binding | 1.26E-03 |
| 36 | GO:0008508: bile acid:sodium symporter activity | 1.26E-03 |
| 37 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.26E-03 |
| 38 | GO:0004176: ATP-dependent peptidase activity | 1.30E-03 |
| 39 | GO:0033612: receptor serine/threonine kinase binding | 1.30E-03 |
| 40 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.36E-03 |
| 41 | GO:0016491: oxidoreductase activity | 1.53E-03 |
| 42 | GO:0009011: starch synthase activity | 1.68E-03 |
| 43 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.15E-03 |
| 44 | GO:0017137: Rab GTPase binding | 2.15E-03 |
| 45 | GO:0003989: acetyl-CoA carboxylase activity | 2.15E-03 |
| 46 | GO:0048038: quinone binding | 2.61E-03 |
| 47 | GO:0004130: cytochrome-c peroxidase activity | 2.65E-03 |
| 48 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.65E-03 |
| 49 | GO:0042578: phosphoric ester hydrolase activity | 2.65E-03 |
| 50 | GO:0015631: tubulin binding | 3.18E-03 |
| 51 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 3.18E-03 |
| 52 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 3.18E-03 |
| 53 | GO:0008237: metallopeptidase activity | 3.35E-03 |
| 54 | GO:0004620: phospholipase activity | 3.75E-03 |
| 55 | GO:0004033: aldo-keto reductase (NADP) activity | 4.35E-03 |
| 56 | GO:0043022: ribosome binding | 4.35E-03 |
| 57 | GO:0008236: serine-type peptidase activity | 4.66E-03 |
| 58 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 4.98E-03 |
| 59 | GO:0015238: drug transmembrane transporter activity | 5.15E-03 |
| 60 | GO:0005096: GTPase activator activity | 5.15E-03 |
| 61 | GO:0004519: endonuclease activity | 5.19E-03 |
| 62 | GO:0003747: translation release factor activity | 5.65E-03 |
| 63 | GO:0044183: protein binding involved in protein folding | 7.80E-03 |
| 64 | GO:0008168: methyltransferase activity | 8.50E-03 |
| 65 | GO:0000049: tRNA binding | 8.58E-03 |
| 66 | GO:0004565: beta-galactosidase activity | 9.38E-03 |
| 67 | GO:0004022: alcohol dehydrogenase (NAD) activity | 9.38E-03 |
| 68 | GO:0008266: poly(U) RNA binding | 1.02E-02 |
| 69 | GO:0003714: transcription corepressor activity | 1.29E-02 |
| 70 | GO:0004407: histone deacetylase activity | 1.29E-02 |
| 71 | GO:0043424: protein histidine kinase binding | 1.38E-02 |
| 72 | GO:0004812: aminoacyl-tRNA ligase activity | 1.88E-02 |
| 73 | GO:0004252: serine-type endopeptidase activity | 2.15E-02 |
| 74 | GO:0050662: coenzyme binding | 2.21E-02 |
| 75 | GO:0015297: antiporter activity | 2.55E-02 |
| 76 | GO:0008483: transaminase activity | 2.91E-02 |
| 77 | GO:0016413: O-acetyltransferase activity | 3.04E-02 |
| 78 | GO:0042802: identical protein binding | 3.40E-02 |
| 79 | GO:0004721: phosphoprotein phosphatase activity | 3.55E-02 |
| 80 | GO:0102483: scopolin beta-glucosidase activity | 3.55E-02 |
| 81 | GO:0005215: transporter activity | 3.61E-02 |
| 82 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.82E-02 |
| 83 | GO:0008422: beta-glucosidase activity | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0042597: periplasmic space | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 8.19E-48 |
| 4 | GO:0009534: chloroplast thylakoid | 7.35E-23 |
| 5 | GO:0009570: chloroplast stroma | 6.78E-22 |
| 6 | GO:0009941: chloroplast envelope | 1.57E-19 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 1.21E-16 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 6.96E-10 |
| 9 | GO:0009579: thylakoid | 6.04E-09 |
| 10 | GO:0031977: thylakoid lumen | 3.40E-07 |
| 11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 9.75E-06 |
| 12 | GO:0009533: chloroplast stromal thylakoid | 1.77E-04 |
| 13 | GO:0009344: nitrite reductase complex [NAD(P)H] | 2.46E-04 |
| 14 | GO:0031969: chloroplast membrane | 5.26E-04 |
| 15 | GO:0010287: plastoglobule | 5.32E-04 |
| 16 | GO:0030095: chloroplast photosystem II | 7.88E-04 |
| 17 | GO:0010007: magnesium chelatase complex | 8.83E-04 |
| 18 | GO:0042651: thylakoid membrane | 1.19E-03 |
| 19 | GO:0005960: glycine cleavage complex | 1.26E-03 |
| 20 | GO:0009536: plastid | 1.31E-03 |
| 21 | GO:0009706: chloroplast inner membrane | 2.56E-03 |
| 22 | GO:0009501: amyloplast | 4.35E-03 |
| 23 | GO:0000311: plastid large ribosomal subunit | 8.58E-03 |
| 24 | GO:0032040: small-subunit processome | 8.58E-03 |
| 25 | GO:0009574: preprophase band | 9.38E-03 |
| 26 | GO:0009654: photosystem II oxygen evolving complex | 1.38E-02 |
| 27 | GO:0043231: intracellular membrane-bounded organelle | 2.18E-02 |
| 28 | GO:0019898: extrinsic component of membrane | 2.32E-02 |
| 29 | GO:0010319: stromule | 2.91E-02 |
| 30 | GO:0005840: ribosome | 3.34E-02 |