gene detail

Gene description

TAIR ID: AT5G23860

Short description: tubulin beta 8

Pathogen responsiveness: -0.85

General responsiveness: -1.49

Orthologous

Rice:

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

response to salt stress, microtubule-based process

GO cellular component

cytoplasm, Golgi apparatus, membrane, microtubule

GO molecular function

GTPase activity, GTP binding

Protein domain

Pfam	PF00091, Tubulin/FtsZ family, GTPase domain
Pfam	PF03953, Tubulin C-terminal domain
SMART	SM00865, Tubulin_C
SMART	SM00864, Tubulin

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04145: Phagosome

Transcriptional regulation

Regulator:
AT5G13790, AT2G20180, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 7

Coexpression network

Differentially expressed condition

14 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.55	3.37E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.61	3.84E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.59	2.58E-08
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.69	8.63E-03
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-1.57	3.53E-02
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.21	1.49E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.54	3.13E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.59	1.60E-09
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-1.96	1.02E-03
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.28	1.62E-05
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-1.71	1.15E-03
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.85	1.51E-12
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.96	7.06E-14
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	-2.21	4.47E-04