GO Enrichment Analysis of Co-expressed Genes with
AT5G23860
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009631: cold acclimation | 5.83E-07 |
| 2 | GO:0010025: wax biosynthetic process | 1.89E-05 |
| 3 | GO:0070417: cellular response to cold | 5.38E-05 |
| 4 | GO:0008610: lipid biosynthetic process | 1.02E-04 |
| 5 | GO:0080051: cutin transport | 1.46E-04 |
| 6 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.46E-04 |
| 7 | GO:0060627: regulation of vesicle-mediated transport | 1.46E-04 |
| 8 | GO:0000038: very long-chain fatty acid metabolic process | 2.59E-04 |
| 9 | GO:0005983: starch catabolic process | 2.99E-04 |
| 10 | GO:0045490: pectin catabolic process | 3.00E-04 |
| 11 | GO:0009409: response to cold | 3.06E-04 |
| 12 | GO:0015709: thiosulfate transport | 3.33E-04 |
| 13 | GO:0071258: cellular response to gravity | 3.33E-04 |
| 14 | GO:0071422: succinate transmembrane transport | 3.33E-04 |
| 15 | GO:0010270: photosystem II oxygen evolving complex assembly | 3.33E-04 |
| 16 | GO:0015908: fatty acid transport | 3.33E-04 |
| 17 | GO:0015786: UDP-glucose transport | 3.33E-04 |
| 18 | GO:0009833: plant-type primary cell wall biogenesis | 4.81E-04 |
| 19 | GO:0006065: UDP-glucuronate biosynthetic process | 5.47E-04 |
| 20 | GO:0015783: GDP-fucose transport | 5.47E-04 |
| 21 | GO:1901000: regulation of response to salt stress | 7.83E-04 |
| 22 | GO:0015729: oxaloacetate transport | 7.83E-04 |
| 23 | GO:0072334: UDP-galactose transmembrane transport | 7.83E-04 |
| 24 | GO:0030100: regulation of endocytosis | 7.83E-04 |
| 25 | GO:0042631: cellular response to water deprivation | 9.62E-04 |
| 26 | GO:0042335: cuticle development | 9.62E-04 |
| 27 | GO:0042545: cell wall modification | 9.73E-04 |
| 28 | GO:0010037: response to carbon dioxide | 1.04E-03 |
| 29 | GO:0010222: stem vascular tissue pattern formation | 1.04E-03 |
| 30 | GO:0015976: carbon utilization | 1.04E-03 |
| 31 | GO:0046345: abscisic acid catabolic process | 1.04E-03 |
| 32 | GO:0045727: positive regulation of translation | 1.04E-03 |
| 33 | GO:0022622: root system development | 1.04E-03 |
| 34 | GO:0071585: detoxification of cadmium ion | 1.04E-03 |
| 35 | GO:2000122: negative regulation of stomatal complex development | 1.04E-03 |
| 36 | GO:0006461: protein complex assembly | 1.31E-03 |
| 37 | GO:0071423: malate transmembrane transport | 1.31E-03 |
| 38 | GO:0006310: DNA recombination | 1.53E-03 |
| 39 | GO:0006828: manganese ion transport | 1.61E-03 |
| 40 | GO:0035435: phosphate ion transmembrane transport | 1.61E-03 |
| 41 | GO:0009913: epidermal cell differentiation | 1.61E-03 |
| 42 | GO:1900425: negative regulation of defense response to bacterium | 1.61E-03 |
| 43 | GO:0010019: chloroplast-nucleus signaling pathway | 1.93E-03 |
| 44 | GO:0009955: adaxial/abaxial pattern specification | 1.93E-03 |
| 45 | GO:0071470: cellular response to osmotic stress | 1.93E-03 |
| 46 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.93E-03 |
| 47 | GO:0006974: cellular response to DNA damage stimulus | 2.02E-03 |
| 48 | GO:0032880: regulation of protein localization | 2.27E-03 |
| 49 | GO:0009610: response to symbiotic fungus | 2.27E-03 |
| 50 | GO:0030497: fatty acid elongation | 2.27E-03 |
| 51 | GO:0008272: sulfate transport | 2.27E-03 |
| 52 | GO:0050829: defense response to Gram-negative bacterium | 2.27E-03 |
| 53 | GO:0035265: organ growth | 2.63E-03 |
| 54 | GO:0042255: ribosome assembly | 2.63E-03 |
| 55 | GO:0051276: chromosome organization | 2.63E-03 |
| 56 | GO:0006353: DNA-templated transcription, termination | 2.63E-03 |
| 57 | GO:0009737: response to abscisic acid | 2.95E-03 |
| 58 | GO:0032544: plastid translation | 3.00E-03 |
| 59 | GO:0006631: fatty acid metabolic process | 3.53E-03 |
| 60 | GO:0042761: very long-chain fatty acid biosynthetic process | 3.81E-03 |
| 61 | GO:0006816: calcium ion transport | 4.67E-03 |
| 62 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.67E-03 |
| 63 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.76E-03 |
| 64 | GO:0042538: hyperosmotic salinity response | 4.80E-03 |
| 65 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.13E-03 |
| 66 | GO:0045037: protein import into chloroplast stroma | 5.13E-03 |
| 67 | GO:0010588: cotyledon vascular tissue pattern formation | 5.60E-03 |
| 68 | GO:2000012: regulation of auxin polar transport | 5.60E-03 |
| 69 | GO:0010102: lateral root morphogenesis | 5.60E-03 |
| 70 | GO:0043086: negative regulation of catalytic activity | 6.08E-03 |
| 71 | GO:0010143: cutin biosynthetic process | 6.09E-03 |
| 72 | GO:0006281: DNA repair | 7.48E-03 |
| 73 | GO:0006289: nucleotide-excision repair | 7.63E-03 |
| 74 | GO:0030150: protein import into mitochondrial matrix | 7.63E-03 |
| 75 | GO:0007017: microtubule-based process | 8.18E-03 |
| 76 | GO:0016998: cell wall macromolecule catabolic process | 8.73E-03 |
| 77 | GO:0019915: lipid storage | 8.73E-03 |
| 78 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 9.89E-03 |
| 79 | GO:0071215: cellular response to abscisic acid stimulus | 9.89E-03 |
| 80 | GO:0071555: cell wall organization | 1.03E-02 |
| 81 | GO:0006979: response to oxidative stress | 1.04E-02 |
| 82 | GO:0006284: base-excision repair | 1.05E-02 |
| 83 | GO:0008284: positive regulation of cell proliferation | 1.11E-02 |
| 84 | GO:0006633: fatty acid biosynthetic process | 1.15E-02 |
| 85 | GO:0000413: protein peptidyl-prolyl isomerization | 1.17E-02 |
| 86 | GO:0000226: microtubule cytoskeleton organization | 1.17E-02 |
| 87 | GO:0010268: brassinosteroid homeostasis | 1.24E-02 |
| 88 | GO:0009958: positive gravitropism | 1.24E-02 |
| 89 | GO:0019252: starch biosynthetic process | 1.37E-02 |
| 90 | GO:0009749: response to glucose | 1.37E-02 |
| 91 | GO:0016132: brassinosteroid biosynthetic process | 1.43E-02 |
| 92 | GO:0000302: response to reactive oxygen species | 1.43E-02 |
| 93 | GO:0007166: cell surface receptor signaling pathway | 1.45E-02 |
| 94 | GO:0032502: developmental process | 1.50E-02 |
| 95 | GO:0009828: plant-type cell wall loosening | 1.64E-02 |
| 96 | GO:0016125: sterol metabolic process | 1.64E-02 |
| 97 | GO:0019760: glucosinolate metabolic process | 1.64E-02 |
| 98 | GO:0009639: response to red or far red light | 1.64E-02 |
| 99 | GO:0005975: carbohydrate metabolic process | 1.92E-02 |
| 100 | GO:0010411: xyloglucan metabolic process | 2.09E-02 |
| 101 | GO:0009817: defense response to fungus, incompatible interaction | 2.25E-02 |
| 102 | GO:0030244: cellulose biosynthetic process | 2.25E-02 |
| 103 | GO:0009832: plant-type cell wall biogenesis | 2.33E-02 |
| 104 | GO:0080167: response to karrikin | 2.44E-02 |
| 105 | GO:0007568: aging | 2.49E-02 |
| 106 | GO:0048527: lateral root development | 2.49E-02 |
| 107 | GO:0010119: regulation of stomatal movement | 2.49E-02 |
| 108 | GO:0000724: double-strand break repair via homologous recombination | 2.58E-02 |
| 109 | GO:0016051: carbohydrate biosynthetic process | 2.66E-02 |
| 110 | GO:0034599: cellular response to oxidative stress | 2.75E-02 |
| 111 | GO:0006839: mitochondrial transport | 2.92E-02 |
| 112 | GO:0009744: response to sucrose | 3.19E-02 |
| 113 | GO:0009640: photomorphogenesis | 3.19E-02 |
| 114 | GO:0008283: cell proliferation | 3.19E-02 |
| 115 | GO:0042546: cell wall biogenesis | 3.28E-02 |
| 116 | GO:0000209: protein polyubiquitination | 3.28E-02 |
| 117 | GO:0006260: DNA replication | 3.65E-02 |
| 118 | GO:0009664: plant-type cell wall organization | 3.75E-02 |
| 119 | GO:0009753: response to jasmonic acid | 3.86E-02 |
| 120 | GO:0006364: rRNA processing | 3.94E-02 |
| 121 | GO:0008152: metabolic process | 3.96E-02 |
| 122 | GO:0006857: oligopeptide transport | 4.14E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 3 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 4 | GO:0051060: pullulanase activity | 0.00E+00 |
| 5 | GO:0004556: alpha-amylase activity | 4.18E-05 |
| 6 | GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity | 1.46E-04 |
| 7 | GO:0015245: fatty acid transporter activity | 1.46E-04 |
| 8 | GO:0005534: galactose binding | 1.46E-04 |
| 9 | GO:1901677: phosphate transmembrane transporter activity | 3.33E-04 |
| 10 | GO:0015117: thiosulfate transmembrane transporter activity | 3.33E-04 |
| 11 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 3.33E-04 |
| 12 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 4.81E-04 |
| 13 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 4.81E-04 |
| 14 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 4.81E-04 |
| 15 | GO:0017108: 5'-flap endonuclease activity | 5.47E-04 |
| 16 | GO:0070402: NADPH binding | 5.47E-04 |
| 17 | GO:0005457: GDP-fucose transmembrane transporter activity | 5.47E-04 |
| 18 | GO:0003979: UDP-glucose 6-dehydrogenase activity | 5.47E-04 |
| 19 | GO:0070330: aromatase activity | 5.47E-04 |
| 20 | GO:0005310: dicarboxylic acid transmembrane transporter activity | 5.47E-04 |
| 21 | GO:0015141: succinate transmembrane transporter activity | 5.47E-04 |
| 22 | GO:0010295: (+)-abscisic acid 8'-hydroxylase activity | 5.47E-04 |
| 23 | GO:0045330: aspartyl esterase activity | 7.40E-04 |
| 24 | GO:0003883: CTP synthase activity | 7.83E-04 |
| 25 | GO:0005460: UDP-glucose transmembrane transporter activity | 7.83E-04 |
| 26 | GO:0015131: oxaloacetate transmembrane transporter activity | 7.83E-04 |
| 27 | GO:0030599: pectinesterase activity | 9.37E-04 |
| 28 | GO:0019104: DNA N-glycosylase activity | 1.04E-03 |
| 29 | GO:0016746: transferase activity, transferring acyl groups | 1.05E-03 |
| 30 | GO:0018685: alkane 1-monooxygenase activity | 1.31E-03 |
| 31 | GO:0009922: fatty acid elongase activity | 1.31E-03 |
| 32 | GO:0005459: UDP-galactose transmembrane transporter activity | 1.31E-03 |
| 33 | GO:0019843: rRNA binding | 1.33E-03 |
| 34 | GO:0016688: L-ascorbate peroxidase activity | 1.61E-03 |
| 35 | GO:0009378: four-way junction helicase activity | 1.61E-03 |
| 36 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.61E-03 |
| 37 | GO:0043140: ATP-dependent 3'-5' DNA helicase activity | 1.61E-03 |
| 38 | GO:0004130: cytochrome-c peroxidase activity | 1.61E-03 |
| 39 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.61E-03 |
| 40 | GO:0046910: pectinesterase inhibitor activity | 1.83E-03 |
| 41 | GO:0043138: 3'-5' DNA helicase activity | 1.93E-03 |
| 42 | GO:0004620: phospholipase activity | 2.27E-03 |
| 43 | GO:0015140: malate transmembrane transporter activity | 2.27E-03 |
| 44 | GO:0015288: porin activity | 2.63E-03 |
| 45 | GO:0016209: antioxidant activity | 2.63E-03 |
| 46 | GO:0005384: manganese ion transmembrane transporter activity | 3.81E-03 |
| 47 | GO:0015020: glucuronosyltransferase activity | 4.23E-03 |
| 48 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.46E-03 |
| 49 | GO:0015116: sulfate transmembrane transporter activity | 5.13E-03 |
| 50 | GO:0004089: carbonate dehydratase activity | 5.60E-03 |
| 51 | GO:0015095: magnesium ion transmembrane transporter activity | 5.60E-03 |
| 52 | GO:0015266: protein channel activity | 5.60E-03 |
| 53 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 6.09E-03 |
| 54 | GO:0008266: poly(U) RNA binding | 6.09E-03 |
| 55 | GO:0008083: growth factor activity | 6.09E-03 |
| 56 | GO:0003924: GTPase activity | 7.48E-03 |
| 57 | GO:0005528: FK506 binding | 7.63E-03 |
| 58 | GO:0016760: cellulose synthase (UDP-forming) activity | 9.89E-03 |
| 59 | GO:0030570: pectate lyase activity | 9.89E-03 |
| 60 | GO:0044212: transcription regulatory region DNA binding | 1.03E-02 |
| 61 | GO:0003727: single-stranded RNA binding | 1.05E-02 |
| 62 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.18E-02 |
| 63 | GO:0015297: antiporter activity | 1.21E-02 |
| 64 | GO:0003713: transcription coactivator activity | 1.24E-02 |
| 65 | GO:0050662: coenzyme binding | 1.30E-02 |
| 66 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.43E-02 |
| 67 | GO:0004518: nuclease activity | 1.50E-02 |
| 68 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.61E-02 |
| 69 | GO:0043565: sequence-specific DNA binding | 1.62E-02 |
| 70 | GO:0016759: cellulose synthase activity | 1.64E-02 |
| 71 | GO:0003684: damaged DNA binding | 1.64E-02 |
| 72 | GO:0016791: phosphatase activity | 1.64E-02 |
| 73 | GO:0005200: structural constituent of cytoskeleton | 1.72E-02 |
| 74 | GO:0008375: acetylglucosaminyltransferase activity | 2.01E-02 |
| 75 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.09E-02 |
| 76 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.17E-02 |
| 77 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.20E-02 |
| 78 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.25E-02 |
| 79 | GO:0005096: GTPase activator activity | 2.33E-02 |
| 80 | GO:0061630: ubiquitin protein ligase activity | 2.57E-02 |
| 81 | GO:0003993: acid phosphatase activity | 2.75E-02 |
| 82 | GO:0005525: GTP binding | 2.90E-02 |
| 83 | GO:0005198: structural molecule activity | 3.47E-02 |
| 84 | GO:0051287: NAD binding | 3.65E-02 |
| 85 | GO:0003690: double-stranded DNA binding | 4.04E-02 |
| 86 | GO:0015171: amino acid transmembrane transporter activity | 4.24E-02 |
| 87 | GO:0031625: ubiquitin protein ligase binding | 4.24E-02 |
| 88 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.54E-02 |
| 89 | GO:0016874: ligase activity | 4.85E-02 |
| 90 | GO:0022857: transmembrane transporter activity | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034426: etioplast membrane | 0.00E+00 |
| 2 | GO:0033557: Slx1-Slx4 complex | 0.00E+00 |
| 3 | GO:0031357: integral component of chloroplast inner membrane | 1.05E-06 |
| 4 | GO:0009505: plant-type cell wall | 6.67E-06 |
| 5 | GO:0009570: chloroplast stroma | 1.19E-04 |
| 6 | GO:0009941: chloroplast envelope | 1.46E-04 |
| 7 | GO:0009579: thylakoid | 2.21E-04 |
| 8 | GO:0009534: chloroplast thylakoid | 2.26E-04 |
| 9 | GO:0005618: cell wall | 3.23E-04 |
| 10 | GO:0009897: external side of plasma membrane | 5.47E-04 |
| 11 | GO:0016020: membrane | 6.90E-04 |
| 12 | GO:0009535: chloroplast thylakoid membrane | 9.49E-04 |
| 13 | GO:0009527: plastid outer membrane | 1.04E-03 |
| 14 | GO:0005886: plasma membrane | 1.20E-03 |
| 15 | GO:0005798: Golgi-associated vesicle | 1.61E-03 |
| 16 | GO:0009507: chloroplast | 1.88E-03 |
| 17 | GO:0031305: integral component of mitochondrial inner membrane | 2.63E-03 |
| 18 | GO:0046930: pore complex | 3.00E-03 |
| 19 | GO:0045298: tubulin complex | 3.40E-03 |
| 20 | GO:0031977: thylakoid lumen | 3.53E-03 |
| 21 | GO:0009508: plastid chromosome | 5.60E-03 |
| 22 | GO:0000312: plastid small ribosomal subunit | 6.09E-03 |
| 23 | GO:0005769: early endosome | 7.10E-03 |
| 24 | GO:0010287: plastoglobule | 8.69E-03 |
| 25 | GO:0009543: chloroplast thylakoid lumen | 9.17E-03 |
| 26 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.05E-02 |
| 27 | GO:0005694: chromosome | 1.50E-02 |
| 28 | GO:0071944: cell periphery | 1.57E-02 |
| 29 | GO:0010319: stromule | 1.72E-02 |
| 30 | GO:0009295: nucleoid | 1.72E-02 |
| 31 | GO:0009506: plasmodesma | 1.78E-02 |
| 32 | GO:0009707: chloroplast outer membrane | 2.25E-02 |
| 33 | GO:0005802: trans-Golgi network | 2.80E-02 |
| 34 | GO:0016021: integral component of membrane | 3.09E-02 |
| 35 | GO:0005576: extracellular region | 3.09E-02 |
| 36 | GO:0005768: endosome | 3.29E-02 |
| 37 | GO:0005773: vacuole | 4.62E-02 |