Gene: AT5G03210
     


Gene description


TAIR ID: AT5G03210

No short description

Pathogen responsiveness: 1.35

General responsiveness: -0.50

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


defense response to virus


GO cellular component


nucleus, cytosol


GO molecular function


ligase activity


Protein domain


No domain annotation

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G51600, AT1G66600, AT5G11260, AT3G47640, AT5G41315, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


26 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h2.111.07E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h4.793.59E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h4.931.38E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h6.291.46E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h3.731.41E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h5.161.81E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h5.465.60E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h4.581.60E-12
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h5.781.27E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h5.593.42E-14
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h4.562.34E-12
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min1.792.19E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h1.904.92E-08
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h4.421.90E-13
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h3.675.14E-10
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h1.685.23E-03
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h2.923.92E-07
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h3.271.37E-08
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h1.726.28E-03
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h2.441.25E-04
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h3.462.44E-08
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h3.289.05E-08
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h2.126.31E-04
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h3.871.38E-10
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h3.111.27E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.852.49E-02






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.