co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G03210

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0035264: multicellular organism growth	0.00E+00
2	GO:0071289: cellular response to nickel ion	0.00E+00
3	GO:0042353: fucose biosynthetic process	0.00E+00
4	GO:0007141: male meiosis I	0.00E+00
5	GO:0034775: glutathione transmembrane transport	0.00E+00
6	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
7	GO:0010200: response to chitin	4.74E-12
8	GO:0009611: response to wounding	1.19E-09
9	GO:0009873: ethylene-activated signaling pathway	5.18E-07
10	GO:2000280: regulation of root development	1.06E-05
11	GO:0006970: response to osmotic stress	4.45E-05
12	GO:0009695: jasmonic acid biosynthetic process	6.87E-05
13	GO:0031408: oxylipin biosynthetic process	7.94E-05
14	GO:0009737: response to abscisic acid	8.33E-05
15	GO:0006751: glutathione catabolic process	8.46E-05
16	GO:2000070: regulation of response to water deprivation	1.97E-04
17	GO:0050691: regulation of defense response to virus by host	2.25E-04
18	GO:0006680: glucosylceramide catabolic process	2.25E-04
19	GO:1902039: negative regulation of seed dormancy process	2.25E-04
20	GO:0034472: snRNA 3'-end processing	2.25E-04
21	GO:0010941: regulation of cell death	2.25E-04
22	GO:0009609: response to symbiotic bacterium	2.25E-04
23	GO:0051180: vitamin transport	2.25E-04
24	GO:0030974: thiamine pyrophosphate transport	2.25E-04
25	GO:0009865: pollen tube adhesion	2.25E-04
26	GO:0010029: regulation of seed germination	3.95E-04
27	GO:0031407: oxylipin metabolic process	5.00E-04
28	GO:0042754: negative regulation of circadian rhythm	5.00E-04
29	GO:0010289: homogalacturonan biosynthetic process	5.00E-04
30	GO:0015893: drug transport	5.00E-04
31	GO:0048838: release of seed from dormancy	5.00E-04
32	GO:0006741: NADP biosynthetic process	5.00E-04
33	GO:1901679: nucleotide transmembrane transport	5.00E-04
34	GO:0009414: response to water deprivation	5.99E-04
35	GO:0007623: circadian rhythm	7.76E-04
36	GO:0009751: response to salicylic acid	8.12E-04
37	GO:0090630: activation of GTPase activity	8.13E-04
38	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	8.13E-04
39	GO:0019674: NAD metabolic process	8.13E-04
40	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	8.13E-04
41	GO:0080121: AMP transport	8.13E-04
42	GO:0080163: regulation of protein serine/threonine phosphatase activity	8.13E-04
43	GO:0080168: abscisic acid transport	8.13E-04
44	GO:0006470: protein dephosphorylation	9.48E-04
45	GO:0051707: response to other organism	9.59E-04
46	GO:0019363: pyridine nucleotide biosynthetic process	1.16E-03
47	GO:0033014: tetrapyrrole biosynthetic process	1.16E-03
48	GO:0009409: response to cold	1.22E-03
49	GO:1902347: response to strigolactone	1.54E-03
50	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.54E-03
51	GO:0045727: positive regulation of translation	1.54E-03
52	GO:0034440: lipid oxidation	1.54E-03
53	GO:0015867: ATP transport	1.54E-03
54	GO:0042991: transcription factor import into nucleus	1.54E-03
55	GO:0009247: glycolipid biosynthetic process	1.97E-03
56	GO:0070897: DNA-templated transcriptional preinitiation complex assembly	1.97E-03
57	GO:0045487: gibberellin catabolic process	1.97E-03
58	GO:0010117: photoprotection	1.97E-03
59	GO:0010193: response to ozone	2.30E-03
60	GO:0015866: ADP transport	2.43E-03
61	GO:0010256: endomembrane system organization	2.43E-03
62	GO:0048232: male gamete generation	2.43E-03
63	GO:0035435: phosphate ion transmembrane transport	2.43E-03
64	GO:0047484: regulation of response to osmotic stress	2.43E-03
65	GO:0045892: negative regulation of transcription, DNA-templated	2.79E-03
66	GO:0098655: cation transmembrane transport	2.91E-03
67	GO:0010555: response to mannitol	2.91E-03
68	GO:0080086: stamen filament development	2.91E-03
69	GO:1901001: negative regulation of response to salt stress	2.91E-03
70	GO:0009651: response to salt stress	3.14E-03
71	GO:1902074: response to salt	3.43E-03
72	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.43E-03
73	GO:0006401: RNA catabolic process	3.43E-03
74	GO:0006955: immune response	3.43E-03
75	GO:1900057: positive regulation of leaf senescence	3.43E-03
76	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.50E-03
77	GO:0009790: embryo development	3.51E-03
78	GO:0007155: cell adhesion	3.98E-03
79	GO:0009061: anaerobic respiration	3.98E-03
80	GO:0019375: galactolipid biosynthetic process	3.98E-03
81	GO:0009415: response to water	3.98E-03
82	GO:0009699: phenylpropanoid biosynthetic process	4.56E-03
83	GO:0048193: Golgi vesicle transport	4.56E-03
84	GO:0006811: ion transport	4.75E-03
85	GO:0006351: transcription, DNA-templated	5.08E-03
86	GO:0006783: heme biosynthetic process	5.16E-03
87	GO:0010345: suberin biosynthetic process	5.16E-03
88	GO:0098656: anion transmembrane transport	5.16E-03
89	GO:0051865: protein autoubiquitination	5.16E-03
90	GO:0090305: nucleic acid phosphodiester bond hydrolysis	5.16E-03
91	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	5.16E-03
92	GO:0009617: response to bacterium	5.44E-03
93	GO:0006779: porphyrin-containing compound biosynthetic process	5.79E-03
94	GO:0006839: mitochondrial transport	6.22E-03
95	GO:0009688: abscisic acid biosynthetic process	6.45E-03
96	GO:0006782: protoporphyrinogen IX biosynthetic process	6.45E-03
97	GO:0051026: chiasma assembly	6.45E-03
98	GO:0019538: protein metabolic process	6.45E-03
99	GO:0055062: phosphate ion homeostasis	6.45E-03
100	GO:0010015: root morphogenesis	7.13E-03
101	GO:0008285: negative regulation of cell proliferation	7.13E-03
102	GO:0010105: negative regulation of ethylene-activated signaling pathway	7.84E-03
103	GO:0006979: response to oxidative stress	7.91E-03
104	GO:0018107: peptidyl-threonine phosphorylation	8.57E-03
105	GO:0055046: microgametogenesis	8.57E-03
106	GO:0042538: hyperosmotic salinity response	8.84E-03
107	GO:0009555: pollen development	8.96E-03
108	GO:0048467: gynoecium development	9.33E-03
109	GO:0002237: response to molecule of bacterial origin	9.33E-03
110	GO:0009809: lignin biosynthetic process	9.50E-03
111	GO:0006364: rRNA processing	9.50E-03
112	GO:0071732: cellular response to nitric oxide	1.01E-02
113	GO:0010030: positive regulation of seed germination	1.01E-02
114	GO:0070588: calcium ion transmembrane transport	1.01E-02
115	GO:0009969: xyloglucan biosynthetic process	1.01E-02
116	GO:0009901: anther dehiscence	1.01E-02
117	GO:0006636: unsaturated fatty acid biosynthetic process	1.09E-02
118	GO:0009863: salicylic acid mediated signaling pathway	1.17E-02
119	GO:0009620: response to fungus	1.24E-02
120	GO:0006355: regulation of transcription, DNA-templated	1.33E-02
121	GO:0009269: response to desiccation	1.34E-02
122	GO:0080092: regulation of pollen tube growth	1.43E-02
123	GO:0030245: cellulose catabolic process	1.43E-02
124	GO:0007131: reciprocal meiotic recombination	1.43E-02
125	GO:0030433: ubiquitin-dependent ERAD pathway	1.43E-02
126	GO:0071369: cellular response to ethylene stimulus	1.53E-02
127	GO:0040007: growth	1.53E-02
128	GO:0001944: vasculature development	1.53E-02
129	GO:0009686: gibberellin biosynthetic process	1.53E-02
130	GO:0048443: stamen development	1.62E-02
131	GO:0009753: response to jasmonic acid	1.79E-02
132	GO:0000271: polysaccharide biosynthetic process	1.81E-02
133	GO:0010501: RNA secondary structure unwinding	1.81E-02
134	GO:0048653: anther development	1.81E-02
135	GO:0048868: pollen tube development	1.91E-02
136	GO:0009960: endosperm development	1.91E-02
137	GO:0045489: pectin biosynthetic process	1.91E-02
138	GO:0048544: recognition of pollen	2.01E-02
139	GO:0006814: sodium ion transport	2.01E-02
140	GO:0010183: pollen tube guidance	2.11E-02
141	GO:0009749: response to glucose	2.11E-02
142	GO:0006633: fatty acid biosynthetic process	2.14E-02
143	GO:0080156: mitochondrial mRNA modification	2.22E-02
144	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.22E-02
145	GO:0000302: response to reactive oxygen species	2.22E-02
146	GO:0010150: leaf senescence	2.35E-02
147	GO:1901657: glycosyl compound metabolic process	2.43E-02
148	GO:0071281: cellular response to iron ion	2.43E-02
149	GO:0006952: defense response	2.52E-02
150	GO:0006310: DNA recombination	2.54E-02
151	GO:0009639: response to red or far red light	2.54E-02
152	GO:0010286: heat acclimation	2.65E-02
153	GO:0071805: potassium ion transmembrane transport	2.65E-02
154	GO:0010027: thylakoid membrane organization	2.88E-02
155	GO:0009816: defense response to bacterium, incompatible interaction	3.00E-02
156	GO:0009738: abscisic acid-activated signaling pathway	3.22E-02
157	GO:0015995: chlorophyll biosynthetic process	3.24E-02
158	GO:0048481: plant ovule development	3.48E-02
159	GO:0035556: intracellular signal transduction	3.58E-02
160	GO:0009631: cold acclimation	3.86E-02
161	GO:0016051: carbohydrate biosynthetic process	4.12E-02
162	GO:0045087: innate immune response	4.12E-02
163	GO:0009723: response to ethylene	4.19E-02
164	GO:0080167: response to karrikin	4.49E-02
165	GO:0042542: response to hydrogen peroxide	4.79E-02
166	GO:0010114: response to red light	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0017048: Rho GTPase binding	0.00E+00
2	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
3	GO:0016629: 12-oxophytodienoate reductase activity	2.37E-06
4	GO:0003840: gamma-glutamyltransferase activity	8.63E-06
5	GO:0036374: glutathione hydrolase activity	8.63E-06
6	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.97E-05
7	GO:0016621: cinnamoyl-CoA reductase activity	1.54E-04
8	GO:0042736: NADH kinase activity	2.25E-04
9	GO:0090422: thiamine pyrophosphate transporter activity	2.25E-04
10	GO:0090440: abscisic acid transporter activity	2.25E-04
11	GO:0004348: glucosylceramidase activity	2.25E-04
12	GO:0004864: protein phosphatase inhibitor activity	4.12E-04
13	GO:0004103: choline kinase activity	5.00E-04
14	GO:0008883: glutamyl-tRNA reductase activity	5.00E-04
15	GO:0001047: core promoter binding	5.00E-04
16	GO:0042389: omega-3 fatty acid desaturase activity	5.00E-04
17	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	5.00E-04
18	GO:0019888: protein phosphatase regulator activity	6.19E-04
19	GO:0004722: protein serine/threonine phosphatase activity	6.77E-04
20	GO:0046423: allene-oxide cyclase activity	8.13E-04
21	GO:0004383: guanylate cyclase activity	8.13E-04
22	GO:0016165: linoleate 13S-lipoxygenase activity	8.13E-04
23	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.16E-03
24	GO:0001653: peptide receptor activity	1.16E-03
25	GO:0005432: calcium:sodium antiporter activity	1.16E-03
26	GO:0035250: UDP-galactosyltransferase activity	1.16E-03
27	GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity	1.97E-03
28	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.97E-03
29	GO:0009922: fatty acid elongase activity	1.97E-03
30	GO:0080122: AMP transmembrane transporter activity	1.97E-03
31	GO:0010181: FMN binding	2.00E-03
32	GO:0015217: ADP transmembrane transporter activity	2.91E-03
33	GO:0005347: ATP transmembrane transporter activity	2.91E-03
34	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.95E-03
35	GO:0102425: myricetin 3-O-glucosyltransferase activity	3.43E-03
36	GO:0102360: daphnetin 3-O-glucosyltransferase activity	3.43E-03
37	GO:0004004: ATP-dependent RNA helicase activity	3.89E-03
38	GO:0015491: cation:cation antiporter activity	3.98E-03
39	GO:0004564: beta-fructofuranosidase activity	3.98E-03
40	GO:0047893: flavonol 3-O-glucosyltransferase activity	3.98E-03
41	GO:0015297: antiporter activity	4.09E-03
42	GO:0005096: GTPase activator activity	4.53E-03
43	GO:0003951: NAD+ kinase activity	4.56E-03
44	GO:0005267: potassium channel activity	4.56E-03
45	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	4.56E-03
46	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.98E-03
47	GO:0004575: sucrose alpha-glucosidase activity	5.79E-03
48	GO:0003677: DNA binding	8.35E-03
49	GO:0005262: calcium channel activity	8.57E-03
50	GO:0015114: phosphate ion transmembrane transporter activity	8.57E-03
51	GO:0000175: 3'-5'-exoribonuclease activity	8.57E-03
52	GO:0003700: transcription factor activity, sequence-specific DNA binding	8.85E-03
53	GO:0017025: TBP-class protein binding	1.01E-02
54	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.09E-02
55	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.09E-02
56	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.09E-02
57	GO:0035251: UDP-glucosyltransferase activity	1.34E-02
58	GO:0004540: ribonuclease activity	1.34E-02
59	GO:0004707: MAP kinase activity	1.34E-02
60	GO:0004842: ubiquitin-protein transferase activity	1.37E-02
61	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.43E-02
62	GO:0046872: metal ion binding	1.61E-02
63	GO:0016758: transferase activity, transferring hexosyl groups	1.65E-02
64	GO:0050662: coenzyme binding	2.01E-02
65	GO:0043565: sequence-specific DNA binding	2.14E-02
66	GO:0004518: nuclease activity	2.32E-02
67	GO:0044212: transcription regulatory region DNA binding	2.58E-02
68	GO:0008194: UDP-glycosyltransferase activity	2.63E-02
69	GO:0102483: scopolin beta-glucosidase activity	3.24E-02
70	GO:0004721: phosphoprotein phosphatase activity	3.24E-02
71	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.36E-02
72	GO:0015238: drug transmembrane transporter activity	3.61E-02
73	GO:0050660: flavin adenine dinucleotide binding	4.19E-02
74	GO:0008422: beta-glucosidase activity	4.39E-02
75	GO:0050661: NADP binding	4.52E-02
76	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0032039: integrator complex	0.00E+00
2	GO:0070382: exocytic vesicle	2.25E-04
3	GO:0000159: protein phosphatase type 2A complex	4.76E-04
4	GO:0042170: plastid membrane	5.00E-04
5	GO:0045177: apical part of cell	1.16E-03
6	GO:0000178: exosome (RNase complex)	1.97E-03
7	GO:0031463: Cul3-RING ubiquitin ligase complex	2.43E-03
8	GO:0030173: integral component of Golgi membrane	2.91E-03
9	GO:0016604: nuclear body	5.79E-03
10	GO:0005938: cell cortex	8.57E-03
11	GO:0009706: chloroplast inner membrane	1.36E-02
12	GO:0005743: mitochondrial inner membrane	1.49E-02
13	GO:0000790: nuclear chromatin	1.71E-02
14	GO:0031225: anchored component of membrane	1.75E-02
15	GO:0005770: late endosome	1.91E-02
16	GO:0032580: Golgi cisterna membrane	2.54E-02
17	GO:0005778: peroxisomal membrane	2.65E-02
18	GO:0005737: cytoplasm	2.74E-02
19	GO:0000932: P-body	2.88E-02
20	GO:0031902: late endosome membrane	4.66E-02
21	GO:0090406: pollen tube	4.93E-02