Gene: AT4G34200
     

Gene description


TAIR ID: AT4G34200

Short description: D-3-phosphoglycerate dehydrogenase

Pathogen responsiveness: 1.28

General responsiveness: -0.49

GO biological process


megagametogenesis, embryo development ending in seed dormancy, L-serine biosynthetic process, pollen development, oxidation-reduction process


GO cellular component


chloroplast stroma, mitochondrion, chloroplast, membrane, plastid


GO molecular function


NAD binding, phosphoglycerate dehydrogenase activity


Protein domain


PfamPF00389, D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PfamPF01842, ACT domain
PfamPF02826, D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SMARTSM00997, AdoHcyase_NAD

Transcriptional regulation


Regulator:
AT3G24050, AT4G34680, AT2G45050, AT1G24260, AT3G60530

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


43 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h2.801.03E-09
GSE12856Col, ataf1, controlCol, ataf1, Bg h1.772.71E-08
GSE13739Col, eds, control 7 dCol, eds, G.orontii 7 d2.206.90E-10
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h2.423.57E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.785.35E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.531.97E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.422.56E-07
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h2.334.74E-07
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.857.50E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.131.02E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h3.804.26E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.831.18E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.665.80E-15
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h3.524.87E-06
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h4.221.64E-07
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.443.72E-05
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h1.812.51E-03
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h3.311.64E-08
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h4.341.16E-20
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h2.595.65E-09
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h4.111.09E-18
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h3.232.10E-12
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h4.101.58E-18
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h2.162.58E-06
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h3.312.57E-14
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h2.322.60E-07
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h1.554.07E-04
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h2.247.78E-07
GSE56094Col, WT, control 5 hCol, WT, hrpA- 5 h1.682.15E-04
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h2.652.75E-09
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h1.652.49E-04
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h2.891.24E-10
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h1.996.39E-06
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h3.771.31E-16
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h2.118.58E-07
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h4.377.64E-20
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h3.171.36E-11
GSE5616Col, WT, water 12 hCol, WT, P. infestans 12 h3.081.22E-08
GSE5616Col, WT, water 24 hCol, WT, P. infestans 24 h2.131.06E-06
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h4.041.62E-10
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h2.781.67E-02
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h1.942.26E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h2.161.51E-02






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