Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G34200

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072722: response to amitrole0.00E+00
2GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
3GO:0046865: terpenoid transport0.00E+00
4GO:0051238: sequestering of metal ion0.00E+00
5GO:0000162: tryptophan biosynthetic process5.26E-07
6GO:0006032: chitin catabolic process7.32E-06
7GO:0009651: response to salt stress2.15E-05
8GO:0070588: calcium ion transmembrane transport2.26E-05
9GO:0006564: L-serine biosynthetic process3.65E-05
10GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly5.43E-05
11GO:0009617: response to bacterium7.40E-05
12GO:0010120: camalexin biosynthetic process1.62E-04
13GO:0010204: defense response signaling pathway, resistance gene-independent1.62E-04
14GO:0080120: CAAX-box protein maturation1.71E-04
15GO:0034975: protein folding in endoplasmic reticulum1.71E-04
16GO:0071586: CAAX-box protein processing1.71E-04
17GO:0015760: glucose-6-phosphate transport1.71E-04
18GO:0080173: male-female gamete recognition during double fertilization1.71E-04
19GO:0099132: ATP hydrolysis coupled cation transmembrane transport1.71E-04
20GO:0033306: phytol metabolic process1.71E-04
21GO:0009700: indole phytoalexin biosynthetic process1.71E-04
22GO:0055081: anion homeostasis1.71E-04
23GO:0032491: detection of molecule of fungal origin1.71E-04
24GO:0046686: response to cadmium ion1.78E-04
25GO:0000272: polysaccharide catabolic process3.25E-04
26GO:0010043: response to zinc ion3.81E-04
27GO:0019521: D-gluconate metabolic process3.87E-04
28GO:0002240: response to molecule of oomycetes origin3.87E-04
29GO:0015865: purine nucleotide transport3.87E-04
30GO:0015712: hexose phosphate transport3.87E-04
31GO:0009737: response to abscisic acid4.08E-04
32GO:0006099: tricarboxylic acid cycle4.54E-04
33GO:0010272: response to silver ion6.32E-04
34GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway6.32E-04
35GO:0015692: lead ion transport6.32E-04
36GO:0015714: phosphoenolpyruvate transport6.32E-04
37GO:0080168: abscisic acid transport6.32E-04
38GO:0010498: proteasomal protein catabolic process6.32E-04
39GO:0035436: triose phosphate transmembrane transport6.32E-04
40GO:0006855: drug transmembrane transport7.19E-04
41GO:0016998: cell wall macromolecule catabolic process7.97E-04
42GO:0071456: cellular response to hypoxia8.69E-04
43GO:0030433: ubiquitin-dependent ERAD pathway8.69E-04
44GO:0046836: glycolipid transport9.04E-04
45GO:0010116: positive regulation of abscisic acid biosynthetic process9.04E-04
46GO:0046902: regulation of mitochondrial membrane permeability9.04E-04
47GO:0033014: tetrapyrrole biosynthetic process9.04E-04
48GO:0010255: glucose mediated signaling pathway9.04E-04
49GO:0001676: long-chain fatty acid metabolic process9.04E-04
50GO:0009625: response to insect9.44E-04
51GO:0055114: oxidation-reduction process1.05E-03
52GO:0080167: response to karrikin1.15E-03
53GO:0010109: regulation of photosynthesis1.20E-03
54GO:0046345: abscisic acid catabolic process1.20E-03
55GO:0010363: regulation of plant-type hypersensitive response1.20E-03
56GO:0033356: UDP-L-arabinose metabolic process1.20E-03
57GO:0015713: phosphoglycerate transport1.20E-03
58GO:0009697: salicylic acid biosynthetic process1.52E-03
59GO:0030041: actin filament polymerization1.52E-03
60GO:0010193: response to ozone1.57E-03
61GO:0015691: cadmium ion transport1.87E-03
62GO:0016554: cytidine to uridine editing1.87E-03
63GO:0007035: vacuolar acidification1.87E-03
64GO:0009117: nucleotide metabolic process1.87E-03
65GO:0002238: response to molecule of fungal origin1.87E-03
66GO:0009643: photosynthetic acclimation1.87E-03
67GO:0006511: ubiquitin-dependent protein catabolic process1.95E-03
68GO:0071470: cellular response to osmotic stress2.24E-03
69GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.24E-03
70GO:0009627: systemic acquired resistance2.52E-03
71GO:1902074: response to salt2.64E-03
72GO:0010150: leaf senescence2.65E-03
73GO:0006102: isocitrate metabolic process3.06E-03
74GO:0010928: regulation of auxin mediated signaling pathway3.06E-03
75GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.06E-03
76GO:0009819: drought recovery3.06E-03
77GO:0045010: actin nucleation3.06E-03
78GO:0043562: cellular response to nitrogen levels3.50E-03
79GO:0009699: phenylpropanoid biosynthetic process3.50E-03
80GO:0009932: cell tip growth3.50E-03
81GO:0010497: plasmodesmata-mediated intercellular transport3.50E-03
82GO:0045087: innate immune response3.71E-03
83GO:0042742: defense response to bacterium3.94E-03
84GO:0006098: pentose-phosphate shunt3.95E-03
85GO:0019432: triglyceride biosynthetic process3.95E-03
86GO:0006783: heme biosynthetic process3.95E-03
87GO:0010112: regulation of systemic acquired resistance3.95E-03
88GO:0006979: response to oxidative stress3.99E-03
89GO:0043067: regulation of programmed cell death4.44E-03
90GO:2000280: regulation of root development4.44E-03
91GO:0051707: response to other organism4.78E-03
92GO:0043069: negative regulation of programmed cell death4.93E-03
93GO:0009870: defense response signaling pathway, resistance gene-dependent4.93E-03
94GO:0009636: response to toxic substance5.37E-03
95GO:0009682: induced systemic resistance5.45E-03
96GO:0052544: defense response by callose deposition in cell wall5.45E-03
97GO:0009073: aromatic amino acid family biosynthetic process5.45E-03
98GO:0048229: gametophyte development5.45E-03
99GO:0002213: defense response to insect5.98E-03
100GO:0009846: pollen germination5.99E-03
101GO:0010200: response to chitin6.33E-03
102GO:0006626: protein targeting to mitochondrion6.54E-03
103GO:0006807: nitrogen compound metabolic process6.54E-03
104GO:2000028: regulation of photoperiodism, flowering6.54E-03
105GO:0006541: glutamine metabolic process7.11E-03
106GO:0002237: response to molecule of bacterial origin7.11E-03
107GO:0006096: glycolytic process7.61E-03
108GO:0042343: indole glucosinolate metabolic process7.69E-03
109GO:0009626: plant-type hypersensitive response8.11E-03
110GO:0034976: response to endoplasmic reticulum stress8.30E-03
111GO:0009620: response to fungus8.37E-03
112GO:0050832: defense response to fungus8.82E-03
113GO:2000377: regulation of reactive oxygen species metabolic process8.92E-03
114GO:0080147: root hair cell development8.92E-03
115GO:0009624: response to nematode9.16E-03
116GO:0009751: response to salicylic acid9.78E-03
117GO:0098542: defense response to other organism1.02E-02
118GO:0031348: negative regulation of defense response1.09E-02
119GO:0009753: response to jasmonic acid1.09E-02
120GO:0009814: defense response, incompatible interaction1.09E-02
121GO:0006952: defense response1.11E-02
122GO:0006012: galactose metabolic process1.16E-02
123GO:0010584: pollen exine formation1.23E-02
124GO:0006817: phosphate ion transport1.23E-02
125GO:0009790: embryo development1.34E-02
126GO:0042631: cellular response to water deprivation1.37E-02
127GO:0042391: regulation of membrane potential1.37E-02
128GO:0009646: response to absence of light1.52E-02
129GO:0009851: auxin biosynthetic process1.60E-02
130GO:0009749: response to glucose1.60E-02
131GO:0080156: mitochondrial mRNA modification1.68E-02
132GO:0002229: defense response to oomycetes1.68E-02
133GO:0000302: response to reactive oxygen species1.68E-02
134GO:0009630: gravitropism1.76E-02
135GO:0007166: cell surface receptor signaling pathway1.82E-02
136GO:0009735: response to cytokinin1.84E-02
137GO:0030163: protein catabolic process1.84E-02
138GO:0006464: cellular protein modification process1.93E-02
139GO:0016579: protein deubiquitination2.10E-02
140GO:0009615: response to virus2.18E-02
141GO:0009816: defense response to bacterium, incompatible interaction2.27E-02
142GO:0015995: chlorophyll biosynthetic process2.45E-02
143GO:0006810: transport2.56E-02
144GO:0030244: cellulose biosynthetic process2.64E-02
145GO:0006970: response to osmotic stress2.65E-02
146GO:0009832: plant-type cell wall biogenesis2.73E-02
147GO:0009407: toxin catabolic process2.83E-02
148GO:0009723: response to ethylene2.85E-02
149GO:0007568: aging2.93E-02
150GO:0046777: protein autophosphorylation3.27E-02
151GO:0006839: mitochondrial transport3.43E-02
152GO:0006631: fatty acid metabolic process3.53E-02
153GO:0045454: cell redox homeostasis3.65E-02
154GO:0045892: negative regulation of transcription, DNA-templated3.71E-02
155GO:0009744: response to sucrose3.74E-02
156GO:0032259: methylation4.30E-02
157GO:0006486: protein glycosylation4.62E-02
158GO:0051603: proteolysis involved in cellular protein catabolic process4.74E-02
RankGO TermAdjusted P value
1GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
2GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
3GO:0005522: profilin binding0.00E+00
4GO:0008843: endochitinase activity0.00E+00
5GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
6GO:0035885: exochitinase activity0.00E+00
7GO:0005388: calcium-transporting ATPase activity1.51E-05
8GO:0008061: chitin binding2.26E-05
9GO:0030976: thiamine pyrophosphate binding5.43E-05
10GO:0036402: proteasome-activating ATPase activity5.43E-05
11GO:0005507: copper ion binding1.04E-04
12GO:0005516: calmodulin binding1.20E-04
13GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity1.71E-04
14GO:0004425: indole-3-glycerol-phosphate synthase activity1.71E-04
15GO:0033984: indole-3-glycerol-phosphate lyase activity1.71E-04
16GO:0004048: anthranilate phosphoribosyltransferase activity1.71E-04
17GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity1.71E-04
18GO:0004325: ferrochelatase activity1.71E-04
19GO:0004568: chitinase activity2.80E-04
20GO:0050897: cobalt ion binding3.81E-04
21GO:0004634: phosphopyruvate hydratase activity3.87E-04
22GO:0004617: phosphoglycerate dehydrogenase activity3.87E-04
23GO:0015152: glucose-6-phosphate transmembrane transporter activity3.87E-04
24GO:0004775: succinate-CoA ligase (ADP-forming) activity3.87E-04
25GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity3.87E-04
26GO:0050736: O-malonyltransferase activity3.87E-04
27GO:0015036: disulfide oxidoreductase activity3.87E-04
28GO:0048531: beta-1,3-galactosyltransferase activity3.87E-04
29GO:0004385: guanylate kinase activity3.87E-04
30GO:0004776: succinate-CoA ligase (GDP-forming) activity3.87E-04
31GO:0017025: TBP-class protein binding5.37E-04
32GO:0071917: triose-phosphate transmembrane transporter activity6.32E-04
33GO:0004049: anthranilate synthase activity6.32E-04
34GO:0004148: dihydrolipoyl dehydrogenase activity6.32E-04
35GO:0016805: dipeptidase activity6.32E-04
36GO:0004298: threonine-type endopeptidase activity7.97E-04
37GO:0000287: magnesium ion binding8.11E-04
38GO:0017089: glycolipid transporter activity9.04E-04
39GO:0008276: protein methyltransferase activity9.04E-04
40GO:0004108: citrate (Si)-synthase activity9.04E-04
41GO:0004449: isocitrate dehydrogenase (NAD+) activity9.04E-04
42GO:0003756: protein disulfide isomerase activity1.02E-03
43GO:0015120: phosphoglycerate transmembrane transporter activity1.20E-03
44GO:0004834: tryptophan synthase activity1.20E-03
45GO:0004737: pyruvate decarboxylase activity1.20E-03
46GO:0051861: glycolipid binding1.20E-03
47GO:0005471: ATP:ADP antiporter activity1.52E-03
48GO:0010294: abscisic acid glucosyltransferase activity1.52E-03
49GO:0004040: amidase activity1.52E-03
50GO:0005496: steroid binding1.52E-03
51GO:0047714: galactolipase activity1.87E-03
52GO:0004029: aldehyde dehydrogenase (NAD) activity1.87E-03
53GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity1.87E-03
54GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity1.87E-03
55GO:0102391: decanoate--CoA ligase activity2.24E-03
56GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity2.24E-03
57GO:0004144: diacylglycerol O-acyltransferase activity2.24E-03
58GO:0003978: UDP-glucose 4-epimerase activity2.24E-03
59GO:0004656: procollagen-proline 4-dioxygenase activity2.24E-03
60GO:0005524: ATP binding2.48E-03
61GO:0015297: antiporter activity2.50E-03
62GO:0004467: long-chain fatty acid-CoA ligase activity2.64E-03
63GO:0016831: carboxy-lyase activity2.64E-03
64GO:0008235: metalloexopeptidase activity2.64E-03
65GO:0008121: ubiquinol-cytochrome-c reductase activity2.64E-03
66GO:0008757: S-adenosylmethionine-dependent methyltransferase activity2.80E-03
67GO:0004033: aldo-keto reductase (NADP) activity3.06E-03
68GO:0015238: drug transmembrane transporter activity3.08E-03
69GO:0030145: manganese ion binding3.39E-03
70GO:0008970: phosphatidylcholine 1-acylhydrolase activity3.50E-03
71GO:0030955: potassium ion binding4.44E-03
72GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity4.44E-03
73GO:0004743: pyruvate kinase activity4.44E-03
74GO:0008171: O-methyltransferase activity4.93E-03
75GO:0004177: aminopeptidase activity5.45E-03
76GO:0008559: xenobiotic-transporting ATPase activity5.45E-03
77GO:0004129: cytochrome-c oxidase activity5.45E-03
78GO:0046961: proton-transporting ATPase activity, rotational mechanism5.45E-03
79GO:0050660: flavin adenine dinucleotide binding5.55E-03
80GO:0051287: NAD binding5.78E-03
81GO:0005262: calcium channel activity6.54E-03
82GO:0015114: phosphate ion transmembrane transporter activity6.54E-03
83GO:0004022: alcohol dehydrogenase (NAD) activity6.54E-03
84GO:0005315: inorganic phosphate transmembrane transporter activity6.54E-03
85GO:0004175: endopeptidase activity7.11E-03
86GO:0004190: aspartic-type endopeptidase activity7.69E-03
87GO:0030552: cAMP binding7.69E-03
88GO:0030553: cGMP binding7.69E-03
89GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen8.41E-03
90GO:0003779: actin binding8.89E-03
91GO:0031418: L-ascorbic acid binding8.92E-03
92GO:0008134: transcription factor binding8.92E-03
93GO:0005216: ion channel activity9.56E-03
94GO:0036459: thiol-dependent ubiquitinyl hydrolase activity1.02E-02
95GO:0004499: N,N-dimethylaniline monooxygenase activity1.23E-02
96GO:0005249: voltage-gated potassium channel activity1.37E-02
97GO:0030551: cyclic nucleotide binding1.37E-02
98GO:0005506: iron ion binding1.41E-02
99GO:0005215: transporter activity1.68E-02
100GO:0004843: thiol-dependent ubiquitin-specific protease activity1.68E-02
101GO:0016887: ATPase activity1.74E-02
102GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.84E-02
103GO:0051015: actin filament binding1.84E-02
104GO:0008237: metallopeptidase activity2.01E-02
105GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.02E-02
106GO:0016597: amino acid binding2.10E-02
107GO:0008168: methyltransferase activity2.37E-02
108GO:0004806: triglyceride lipase activity2.45E-02
109GO:0030247: polysaccharide binding2.45E-02
110GO:0043565: sequence-specific DNA binding2.49E-02
111GO:0004222: metalloendopeptidase activity2.83E-02
112GO:0020037: heme binding2.84E-02
113GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.93E-02
114GO:0008233: peptidase activity3.00E-02
115GO:0004497: monooxygenase activity3.05E-02
116GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.12E-02
117GO:0019825: oxygen binding3.20E-02
118GO:0052689: carboxylic ester hydrolase activity3.37E-02
119GO:0050661: NADP binding3.43E-02
120GO:0004364: glutathione transferase activity3.64E-02
121GO:0051537: 2 iron, 2 sulfur cluster binding3.96E-02
122GO:0009055: electron carrier activity4.81E-02
123GO:0044212: transcription regulatory region DNA binding4.93E-02
124GO:0016301: kinase activity4.93E-02
RankGO TermAdjusted P value
1GO:0005911: cell-cell junction0.00E+00
2GO:0019822: P4 peroxisome0.00E+00
3GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
4GO:0000502: proteasome complex5.75E-06
5GO:0005829: cytosol1.17E-05
6GO:0031597: cytosolic proteasome complex7.58E-05
7GO:0031595: nuclear proteasome complex1.01E-04
8GO:0008540: proteasome regulatory particle, base subcomplex2.37E-04
9GO:0005740: mitochondrial envelope2.80E-04
10GO:0005783: endoplasmic reticulum3.25E-04
11GO:0000015: phosphopyruvate hydratase complex3.87E-04
12GO:0005901: caveola3.87E-04
13GO:0031314: extrinsic component of mitochondrial inner membrane3.87E-04
14GO:0005886: plasma membrane3.92E-04
15GO:0005774: vacuolar membrane4.19E-04
16GO:0009507: chloroplast7.05E-04
17GO:0005839: proteasome core complex7.97E-04
18GO:0030660: Golgi-associated vesicle membrane1.20E-03
19GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.20E-03
20GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain1.52E-03
21GO:0005746: mitochondrial respiratory chain1.52E-03
22GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane3.06E-03
23GO:0005887: integral component of plasma membrane3.30E-03
24GO:0000326: protein storage vacuole3.50E-03
25GO:0019773: proteasome core complex, alpha-subunit complex3.50E-03
26GO:0005773: vacuole3.65E-03
27GO:0005618: cell wall5.40E-03
28GO:0005765: lysosomal membrane5.45E-03
29GO:0008541: proteasome regulatory particle, lid subcomplex5.45E-03
30GO:0009536: plastid5.63E-03
31GO:0031969: chloroplast membrane6.06E-03
32GO:0005750: mitochondrial respiratory chain complex III7.11E-03
33GO:0016020: membrane7.43E-03
34GO:0030176: integral component of endoplasmic reticulum membrane7.69E-03
35GO:0016021: integral component of membrane8.92E-03
36GO:0005743: mitochondrial inner membrane9.08E-03
37GO:0005741: mitochondrial outer membrane1.02E-02
38GO:0043231: intracellular membrane-bounded organelle1.13E-02
39GO:0005759: mitochondrial matrix1.45E-02
40GO:0009570: chloroplast stroma1.58E-02
41GO:0005788: endoplasmic reticulum lumen2.27E-02
42GO:0005777: peroxisome2.45E-02
43GO:0005789: endoplasmic reticulum membrane2.71E-02
44GO:0000325: plant-type vacuole2.93E-02
45GO:0048046: apoplast3.61E-02
Gene type



Gene DE type