Gene: AT4G32980
     

Gene description


TAIR ID: AT4G32980

Short description: homeobox gene 1

Pathogen responsiveness: 0.16

General responsiveness: 1.51

Orthologous


Rice:

OS02G0226600  

Maize:

GRMZM2G161435  

Wheat: No orthologous gene

GO biological process


regulation of gibberellin biosynthetic process, meristem maintenance, negative regulation of cell proliferation, transcription, DNA-templated, photomorphogenesis, regulation of transcription, vegetative to reproductive phase transition of meristem, shoot organ boundary specification, floral organ abscission


GO cellular component


nucleus


GO molecular function


protein binding, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF07526, Associated with HOX
PfamPF05920, Homeobox KN domain
SMARTSM00389, HOX
SMARTSM00574, POX

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT4G16110, AT1G24260, AT4G18960

Target:
AT3G15170, AT5G10140

Protein-protein interaction network


The number of partners (degree) is: 12 (Top20%)

click to view PPI network

Differentially expressed condition


26 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h-2.518.73E-08
GSE12856Col, ataf1, controlCol, ataf1, Bg h-3.061.07E-08
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h-1.581.54E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-1.591.06E-02
GSE17464Laer, controlLaer, Flg22 1 h-2.093.45E-04
GSE17464Laer, controlLaer, Flg22 2 h-1.901.02E-03
GSE17464Penta, controlPenta, Flg22 2 h-2.093.38E-04
GSE17464Penta, controlPenta, Flg22 2 h-1.985.92E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.765.02E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.578.33E-04
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-1.761.64E-03
GSE21920Col, ulp1, mockCol, ulp1, Pto 6 h-1.541.25E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.553.72E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.872.52E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.015.56E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.083.02E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.102.29E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.682.68E-09
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.613.87E-07
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.141.73E-05
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.361.74E-07
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.684.11E-12
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.532.25E-10
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h-1.551.91E-04
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h-1.604.89E-08
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.321.82E-03






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