GO Enrichment Analysis of Co-expressed Genes with
AT4G32980
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 2 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 3 | GO:0009773: photosynthetic electron transport in photosystem I | 9.82E-11 |
| 4 | GO:0015979: photosynthesis | 1.56E-07 |
| 5 | GO:0071588: hydrogen peroxide mediated signaling pathway | 9.33E-05 |
| 6 | GO:0071277: cellular response to calcium ion | 9.33E-05 |
| 7 | GO:0051180: vitamin transport | 9.33E-05 |
| 8 | GO:0030974: thiamine pyrophosphate transport | 9.33E-05 |
| 9 | GO:1904966: positive regulation of vitamin E biosynthetic process | 9.33E-05 |
| 10 | GO:1904964: positive regulation of phytol biosynthetic process | 9.33E-05 |
| 11 | GO:0043686: co-translational protein modification | 9.33E-05 |
| 12 | GO:0034337: RNA folding | 9.33E-05 |
| 13 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.20E-04 |
| 14 | GO:0015893: drug transport | 2.20E-04 |
| 15 | GO:0034755: iron ion transmembrane transport | 2.20E-04 |
| 16 | GO:0080005: photosystem stoichiometry adjustment | 2.20E-04 |
| 17 | GO:1902448: positive regulation of shade avoidance | 3.67E-04 |
| 18 | GO:0006954: inflammatory response | 3.67E-04 |
| 19 | GO:0051604: protein maturation | 3.67E-04 |
| 20 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 5.28E-04 |
| 21 | GO:0009765: photosynthesis, light harvesting | 7.02E-04 |
| 22 | GO:0006109: regulation of carbohydrate metabolic process | 7.02E-04 |
| 23 | GO:0045727: positive regulation of translation | 7.02E-04 |
| 24 | GO:0015994: chlorophyll metabolic process | 7.02E-04 |
| 25 | GO:0010021: amylopectin biosynthetic process | 7.02E-04 |
| 26 | GO:0016120: carotene biosynthetic process | 8.88E-04 |
| 27 | GO:0032543: mitochondrial translation | 8.88E-04 |
| 28 | GO:0006564: L-serine biosynthetic process | 8.88E-04 |
| 29 | GO:0031365: N-terminal protein amino acid modification | 8.88E-04 |
| 30 | GO:0007623: circadian rhythm | 9.35E-04 |
| 31 | GO:0010027: thylakoid membrane organization | 1.01E-03 |
| 32 | GO:0016554: cytidine to uridine editing | 1.08E-03 |
| 33 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.08E-03 |
| 34 | GO:0010405: arabinogalactan protein metabolic process | 1.08E-03 |
| 35 | GO:0042549: photosystem II stabilization | 1.08E-03 |
| 36 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.08E-03 |
| 37 | GO:1901259: chloroplast rRNA processing | 1.29E-03 |
| 38 | GO:0010019: chloroplast-nucleus signaling pathway | 1.29E-03 |
| 39 | GO:0018298: protein-chromophore linkage | 1.30E-03 |
| 40 | GO:0010196: nonphotochemical quenching | 1.51E-03 |
| 41 | GO:0006400: tRNA modification | 1.51E-03 |
| 42 | GO:0009395: phospholipid catabolic process | 1.51E-03 |
| 43 | GO:0034599: cellular response to oxidative stress | 1.71E-03 |
| 44 | GO:0008610: lipid biosynthetic process | 1.75E-03 |
| 45 | GO:0009642: response to light intensity | 1.75E-03 |
| 46 | GO:0009704: de-etiolation | 1.75E-03 |
| 47 | GO:0016559: peroxisome fission | 1.75E-03 |
| 48 | GO:0006810: transport | 1.76E-03 |
| 49 | GO:0055085: transmembrane transport | 1.99E-03 |
| 50 | GO:0032544: plastid translation | 2.00E-03 |
| 51 | GO:0017004: cytochrome complex assembly | 2.00E-03 |
| 52 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 2.25E-03 |
| 53 | GO:0090333: regulation of stomatal closure | 2.25E-03 |
| 54 | GO:0010205: photoinhibition | 2.52E-03 |
| 55 | GO:1900865: chloroplast RNA modification | 2.52E-03 |
| 56 | GO:0006364: rRNA processing | 2.82E-03 |
| 57 | GO:0043085: positive regulation of catalytic activity | 3.09E-03 |
| 58 | GO:0006879: cellular iron ion homeostasis | 3.09E-03 |
| 59 | GO:0010628: positive regulation of gene expression | 3.69E-03 |
| 60 | GO:0010020: chloroplast fission | 4.01E-03 |
| 61 | GO:0071732: cellular response to nitric oxide | 4.33E-03 |
| 62 | GO:0006636: unsaturated fatty acid biosynthetic process | 4.67E-03 |
| 63 | GO:0006418: tRNA aminoacylation for protein translation | 5.36E-03 |
| 64 | GO:0016114: terpenoid biosynthetic process | 5.72E-03 |
| 65 | GO:0016226: iron-sulfur cluster assembly | 6.09E-03 |
| 66 | GO:0009735: response to cytokinin | 6.36E-03 |
| 67 | GO:0071369: cellular response to ethylene stimulus | 6.47E-03 |
| 68 | GO:0006817: phosphate ion transport | 6.85E-03 |
| 69 | GO:0006662: glycerol ether metabolic process | 8.06E-03 |
| 70 | GO:0019252: starch biosynthetic process | 8.90E-03 |
| 71 | GO:0000302: response to reactive oxygen species | 9.33E-03 |
| 72 | GO:0071281: cellular response to iron ion | 1.02E-02 |
| 73 | GO:0009658: chloroplast organization | 1.07E-02 |
| 74 | GO:0000160: phosphorelay signal transduction system | 1.51E-02 |
| 75 | GO:0009631: cold acclimation | 1.62E-02 |
| 76 | GO:0006839: mitochondrial transport | 1.89E-02 |
| 77 | GO:0051707: response to other organism | 2.07E-02 |
| 78 | GO:0008152: metabolic process | 2.16E-02 |
| 79 | GO:0009644: response to high light intensity | 2.18E-02 |
| 80 | GO:0009736: cytokinin-activated signaling pathway | 2.55E-02 |
| 81 | GO:0043086: negative regulation of catalytic activity | 2.88E-02 |
| 82 | GO:0009742: brassinosteroid mediated signaling pathway | 3.42E-02 |
| 83 | GO:0042744: hydrogen peroxide catabolic process | 4.22E-02 |
| 84 | GO:0006633: fatty acid biosynthetic process | 4.53E-02 |
| 85 | GO:0009451: RNA modification | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity | 0.00E+00 |
| 3 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 4 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 5 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 6 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 7 | GO:0022891: substrate-specific transmembrane transporter activity | 1.56E-05 |
| 8 | GO:0016168: chlorophyll binding | 7.21E-05 |
| 9 | GO:0090422: thiamine pyrophosphate transporter activity | 9.33E-05 |
| 10 | GO:0042586: peptide deformylase activity | 9.33E-05 |
| 11 | GO:0045485: omega-6 fatty acid desaturase activity | 9.33E-05 |
| 12 | GO:0005080: protein kinase C binding | 9.33E-05 |
| 13 | GO:0050139: nicotinate-N-glucosyltransferase activity | 9.33E-05 |
| 14 | GO:0033201: alpha-1,4-glucan synthase activity | 2.20E-04 |
| 15 | GO:0047746: chlorophyllase activity | 2.20E-04 |
| 16 | GO:0004617: phosphoglycerate dehydrogenase activity | 2.20E-04 |
| 17 | GO:0004373: glycogen (starch) synthase activity | 3.67E-04 |
| 18 | GO:0002161: aminoacyl-tRNA editing activity | 3.67E-04 |
| 19 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 5.28E-04 |
| 20 | GO:0043495: protein anchor | 7.02E-04 |
| 21 | GO:0009011: starch synthase activity | 7.02E-04 |
| 22 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 7.02E-04 |
| 23 | GO:0004518: nuclease activity | 7.57E-04 |
| 24 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.08E-03 |
| 25 | GO:0004130: cytochrome-c peroxidase activity | 1.08E-03 |
| 26 | GO:0042578: phosphoric ester hydrolase activity | 1.08E-03 |
| 27 | GO:0016688: L-ascorbate peroxidase activity | 1.08E-03 |
| 28 | GO:0042802: identical protein binding | 1.25E-03 |
| 29 | GO:0019899: enzyme binding | 1.51E-03 |
| 30 | GO:0004620: phospholipase activity | 1.51E-03 |
| 31 | GO:0043022: ribosome binding | 1.75E-03 |
| 32 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 2.25E-03 |
| 33 | GO:0005381: iron ion transmembrane transporter activity | 2.52E-03 |
| 34 | GO:0008047: enzyme activator activity | 2.80E-03 |
| 35 | GO:0005315: inorganic phosphate transmembrane transporter activity | 3.69E-03 |
| 36 | GO:0008266: poly(U) RNA binding | 4.01E-03 |
| 37 | GO:0005215: transporter activity | 4.71E-03 |
| 38 | GO:0019843: rRNA binding | 4.99E-03 |
| 39 | GO:0004857: enzyme inhibitor activity | 5.01E-03 |
| 40 | GO:0051536: iron-sulfur cluster binding | 5.01E-03 |
| 41 | GO:0004176: ATP-dependent peptidase activity | 5.72E-03 |
| 42 | GO:0047134: protein-disulfide reductase activity | 7.25E-03 |
| 43 | GO:0004812: aminoacyl-tRNA ligase activity | 7.25E-03 |
| 44 | GO:0003729: mRNA binding | 7.39E-03 |
| 45 | GO:0050662: coenzyme binding | 8.47E-03 |
| 46 | GO:0004791: thioredoxin-disulfide reductase activity | 8.47E-03 |
| 47 | GO:0048038: quinone binding | 9.33E-03 |
| 48 | GO:0000156: phosphorelay response regulator activity | 1.02E-02 |
| 49 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.02E-02 |
| 50 | GO:0016788: hydrolase activity, acting on ester bonds | 1.09E-02 |
| 51 | GO:0016597: amino acid binding | 1.16E-02 |
| 52 | GO:0008233: peptidase activity | 1.30E-02 |
| 53 | GO:0008236: serine-type peptidase activity | 1.41E-02 |
| 54 | GO:0003993: acid phosphatase activity | 1.78E-02 |
| 55 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.89E-02 |
| 56 | GO:0003824: catalytic activity | 1.96E-02 |
| 57 | GO:0004519: endonuclease activity | 2.13E-02 |
| 58 | GO:0015293: symporter activity | 2.24E-02 |
| 59 | GO:0051287: NAD binding | 2.37E-02 |
| 60 | GO:0016491: oxidoreductase activity | 2.47E-02 |
| 61 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.08E-02 |
| 62 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.08E-02 |
| 63 | GO:0003723: RNA binding | 3.16E-02 |
| 64 | GO:0015035: protein disulfide oxidoreductase activity | 3.35E-02 |
| 65 | GO:0016758: transferase activity, transferring hexosyl groups | 3.78E-02 |
| 66 | GO:0046872: metal ion binding | 4.20E-02 |
| 67 | GO:0016787: hydrolase activity | 4.50E-02 |
| 68 | GO:0030246: carbohydrate binding | 4.65E-02 |
| 69 | GO:0008017: microtubule binding | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 3.70E-35 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 5.38E-22 |
| 4 | GO:0009534: chloroplast thylakoid | 5.32E-11 |
| 5 | GO:0009579: thylakoid | 1.08E-09 |
| 6 | GO:0009570: chloroplast stroma | 2.01E-09 |
| 7 | GO:0009941: chloroplast envelope | 2.45E-09 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 9.28E-07 |
| 9 | GO:0009523: photosystem II | 3.34E-05 |
| 10 | GO:0042651: thylakoid membrane | 3.24E-04 |
| 11 | GO:0009706: chloroplast inner membrane | 4.73E-04 |
| 12 | GO:0016021: integral component of membrane | 5.86E-04 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 6.28E-04 |
| 14 | GO:0009517: PSII associated light-harvesting complex II | 7.02E-04 |
| 15 | GO:0009526: plastid envelope | 7.02E-04 |
| 16 | GO:0055035: plastid thylakoid membrane | 8.88E-04 |
| 17 | GO:0009501: amyloplast | 1.75E-03 |
| 18 | GO:0031969: chloroplast membrane | 2.11E-03 |
| 19 | GO:0032040: small-subunit processome | 3.38E-03 |
| 20 | GO:0010287: plastoglobule | 4.73E-03 |
| 21 | GO:0009654: photosystem II oxygen evolving complex | 5.36E-03 |
| 22 | GO:0019898: extrinsic component of membrane | 8.90E-03 |
| 23 | GO:0009707: chloroplast outer membrane | 1.46E-02 |
| 24 | GO:0031977: thylakoid lumen | 1.95E-02 |
| 25 | GO:0043231: intracellular membrane-bounded organelle | 2.16E-02 |
| 26 | GO:0005739: mitochondrion | 2.86E-02 |
| 27 | GO:0005623: cell | 3.93E-02 |