Gene: AT4G29780
     

Gene description


TAIR ID: AT4G29780

No short description

Pathogen responsiveness: 1.53

General responsiveness: 1.69

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

Gene Ontology


No GO annotation

Protein domain


PfamPF13359, DDE superfamily endonuclease

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G14230, AT5G11260, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


48 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h1.634.22E-02
GSE12856Col, ataf1, controlCol, ataf1, Bg h3.175.48E-04
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h1.692.17E-02
GSE17464Laer, controlLaer, Flg22 1 h2.978.88E-06
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-1.651.39E-02
GSE17464Penta, controlPenta, Flg22 2 h2.733.58E-05
GSE17464Penta, controlPenta, Flg22 2 h1.581.46E-02
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h3.484.90E-16
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.831.40E-08
GSE20278Col, RPL18-HF, controlCol, RPL18-HF, TuMV 10 d-1.663.84E-02
GSE2169Col, WT, waterCol, WT, chitin 30 min2.644.17E-09
GSE2169Col, rre1, waterCol, rre1, chitin 30 min3.581.67E-11
GSE2169Col, rre2, waterCol, rre2, chitin 30 min3.161.40E-10
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min3.537.41E-08
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min3.548.58E-08
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-2.757.30E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-2.387.26E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h-2.783.93E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-2.116.29E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-1.564.05E-06
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h-2.281.18E-07
GSE40544Col, WT, controlCol, WT, PstDC3000 EV2.019.20E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.962.87E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.021.10E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.334.19E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.451.49E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.531.62E-16
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.577.10E-15
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.451.00E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.194.30E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h4.024.07E-13
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.892.07E-10
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min3.108.75E-05
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h2.792.19E-04
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h1.513.70E-06
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h1.833.10E-07
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.606.93E-03
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h2.283.73E-06
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h2.601.96E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.453.05E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h1.901.86E-02
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min3.832.70E-16
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h3.493.11E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h2.981.51E-02
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min3.793.92E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h2.651.84E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h2.812.25E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min2.855.44E-03






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