co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G29780

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032497: detection of lipopolysaccharide	0.00E+00
2	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
3	GO:0042742: defense response to bacterium	4.88E-08
4	GO:0010200: response to chitin	1.59E-06
5	GO:0070588: calcium ion transmembrane transport	2.01E-05
6	GO:0006952: defense response	2.70E-05
7	GO:0046470: phosphatidylcholine metabolic process	9.33E-05
8	GO:0009626: plant-type hypersensitive response	1.25E-04
9	GO:0007229: integrin-mediated signaling pathway	1.62E-04
10	GO:0080157: regulation of plant-type cell wall organization or biogenesis	1.62E-04
11	GO:0050691: regulation of defense response to virus by host	1.62E-04
12	GO:1902065: response to L-glutamate	1.62E-04
13	GO:0015784: GDP-mannose transport	1.62E-04
14	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.62E-04
15	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.62E-04
16	GO:0006643: membrane lipid metabolic process	1.62E-04
17	GO:0008219: cell death	2.86E-04
18	GO:0015770: sucrose transport	3.02E-04
19	GO:0042754: negative regulation of circadian rhythm	3.69E-04
20	GO:0005985: sucrose metabolic process	5.00E-04
21	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	6.04E-04
22	GO:0015783: GDP-fucose transport	6.04E-04
23	GO:0010581: regulation of starch biosynthetic process	6.04E-04
24	GO:0046713: borate transport	8.63E-04
25	GO:0034219: carbohydrate transmembrane transport	8.63E-04
26	GO:0072334: UDP-galactose transmembrane transport	8.63E-04
27	GO:0002679: respiratory burst involved in defense response	8.63E-04
28	GO:0006468: protein phosphorylation	1.02E-03
29	GO:0007165: signal transduction	1.13E-03
30	GO:0046777: protein autophosphorylation	1.14E-03
31	GO:0046345: abscisic acid catabolic process	1.14E-03
32	GO:0045088: regulation of innate immune response	1.14E-03
33	GO:0022622: root system development	1.14E-03
34	GO:0010508: positive regulation of autophagy	1.14E-03
35	GO:0009697: salicylic acid biosynthetic process	1.45E-03
36	GO:0010225: response to UV-C	1.45E-03
37	GO:0045487: gibberellin catabolic process	1.45E-03
38	GO:0002229: defense response to oomycetes	1.47E-03
39	GO:0010193: response to ozone	1.47E-03
40	GO:0009409: response to cold	1.63E-03
41	GO:1900425: negative regulation of defense response to bacterium	1.78E-03
42	GO:0009759: indole glucosinolate biosynthetic process	1.78E-03
43	GO:0042372: phylloquinone biosynthetic process	2.14E-03
44	GO:0098655: cation transmembrane transport	2.14E-03
45	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.14E-03
46	GO:0009816: defense response to bacterium, incompatible interaction	2.22E-03
47	GO:0048573: photoperiodism, flowering	2.47E-03
48	GO:0070370: cellular heat acclimation	2.52E-03
49	GO:0010044: response to aluminum ion	2.52E-03
50	GO:0010161: red light signaling pathway	2.52E-03
51	GO:0007166: cell surface receptor signaling pathway	2.87E-03
52	GO:0006644: phospholipid metabolic process	2.91E-03
53	GO:0009617: response to bacterium	3.03E-03
54	GO:0010120: camalexin biosynthetic process	3.33E-03
55	GO:0043562: cellular response to nitrogen levels	3.33E-03
56	GO:0009699: phenylpropanoid biosynthetic process	3.33E-03
57	GO:0045087: innate immune response	3.46E-03
58	GO:0051865: protein autoubiquitination	3.77E-03
59	GO:0090333: regulation of stomatal closure	3.77E-03
60	GO:0010449: root meristem growth	4.22E-03
61	GO:0009611: response to wounding	4.59E-03
62	GO:0006970: response to osmotic stress	4.63E-03
63	GO:0007064: mitotic sister chromatid cohesion	4.69E-03
64	GO:0009870: defense response signaling pathway, resistance gene-dependent	4.69E-03
65	GO:0030148: sphingolipid biosynthetic process	5.19E-03
66	GO:0009682: induced systemic resistance	5.19E-03
67	GO:0052544: defense response by callose deposition in cell wall	5.19E-03
68	GO:0080167: response to karrikin	5.53E-03
69	GO:0009846: pollen germination	5.58E-03
70	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	5.69E-03
71	GO:0012501: programmed cell death	5.69E-03
72	GO:0010224: response to UV-B	6.20E-03
73	GO:0055046: microgametogenesis	6.22E-03
74	GO:0007034: vacuolar transport	6.76E-03
75	GO:0034605: cellular response to heat	6.76E-03
76	GO:0002237: response to molecule of bacterial origin	6.76E-03
77	GO:0042343: indole glucosinolate metabolic process	7.32E-03
78	GO:0050832: defense response to fungus	7.65E-03
79	GO:0006071: glycerol metabolic process	7.90E-03
80	GO:0016567: protein ubiquitination	8.02E-03
81	GO:0016042: lipid catabolic process	8.75E-03
82	GO:0031408: oxylipin biosynthetic process	9.72E-03
83	GO:0015992: proton transport	9.72E-03
84	GO:0051260: protein homooligomerization	9.72E-03
85	GO:0098542: defense response to other organism	9.72E-03
86	GO:0009814: defense response, incompatible interaction	1.04E-02
87	GO:0031348: negative regulation of defense response	1.04E-02
88	GO:0071456: cellular response to hypoxia	1.04E-02
89	GO:0001944: vasculature development	1.10E-02
90	GO:0009625: response to insect	1.10E-02
91	GO:0071215: cellular response to abscisic acid stimulus	1.10E-02
92	GO:0009686: gibberellin biosynthetic process	1.10E-02
93	GO:0010584: pollen exine formation	1.17E-02
94	GO:0042147: retrograde transport, endosome to Golgi	1.24E-02
95	GO:0000271: polysaccharide biosynthetic process	1.31E-02
96	GO:0010118: stomatal movement	1.31E-02
97	GO:0042631: cellular response to water deprivation	1.31E-02
98	GO:0006979: response to oxidative stress	1.31E-02
99	GO:0042391: regulation of membrane potential	1.31E-02
100	GO:0045489: pectin biosynthetic process	1.38E-02
101	GO:0048544: recognition of pollen	1.45E-02
102	GO:0006891: intra-Golgi vesicle-mediated transport	1.60E-02
103	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.65E-02
104	GO:0009639: response to red or far red light	1.83E-02
105	GO:0051607: defense response to virus	1.99E-02
106	GO:0001666: response to hypoxia	2.07E-02
107	GO:0009911: positive regulation of flower development	2.07E-02
108	GO:0009607: response to biotic stimulus	2.16E-02
109	GO:0009627: systemic acquired resistance	2.24E-02
110	GO:0016049: cell growth	2.42E-02
111	GO:0009817: defense response to fungus, incompatible interaction	2.51E-02
112	GO:0006499: N-terminal protein myristoylation	2.69E-02
113	GO:0009631: cold acclimation	2.78E-02
114	GO:0009651: response to salt stress	2.80E-02
115	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.94E-02
116	GO:0016051: carbohydrate biosynthetic process	2.97E-02
117	GO:0042542: response to hydrogen peroxide	3.45E-02
118	GO:0051707: response to other organism	3.55E-02
119	GO:0042546: cell wall biogenesis	3.66E-02
120	GO:0000209: protein polyubiquitination	3.66E-02
121	GO:0008643: carbohydrate transport	3.76E-02
122	GO:0009737: response to abscisic acid	3.95E-02
123	GO:0000165: MAPK cascade	4.07E-02
124	GO:0031347: regulation of defense response	4.07E-02
125	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.07E-02
126	GO:0009751: response to salicylic acid	4.12E-02
127	GO:0006629: lipid metabolic process	4.18E-02
128	GO:0009809: lignin biosynthetic process	4.39E-02
129	GO:0006813: potassium ion transport	4.39E-02
130	GO:0009753: response to jasmonic acid	4.48E-02
131	GO:0009909: regulation of flower development	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0005458: GDP-mannose transmembrane transporter activity	0.00E+00
2	GO:0005388: calcium-transporting ATPase activity	1.34E-05
3	GO:0043531: ADP binding	1.35E-05
4	GO:0016301: kinase activity	6.83E-05
5	GO:0004674: protein serine/threonine kinase activity	7.36E-05
6	GO:0008506: sucrose:proton symporter activity	9.33E-05
7	GO:0004630: phospholipase D activity	1.50E-04
8	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.50E-04
9	GO:0008909: isochorismate synthase activity	1.62E-04
10	GO:0046027: phospholipid:diacylglycerol acyltransferase activity	1.62E-04
11	GO:0015085: calcium ion transmembrane transporter activity	1.62E-04
12	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.62E-04
13	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.62E-04
14	GO:0045140: inositol phosphoceramide synthase activity	3.69E-04
15	GO:0080041: ADP-ribose pyrophosphohydrolase activity	3.69E-04
16	GO:0017110: nucleoside-diphosphatase activity	3.69E-04
17	GO:0005516: calmodulin binding	4.98E-04
18	GO:0005457: GDP-fucose transmembrane transporter activity	6.04E-04
19	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	8.63E-04
20	GO:0005524: ATP binding	8.86E-04
21	GO:0005249: voltage-gated potassium channel activity	1.11E-03
22	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	1.14E-03
23	GO:0042277: peptide binding	1.14E-03
24	GO:0047631: ADP-ribose diphosphatase activity	1.45E-03
25	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.45E-03
26	GO:0010294: abscisic acid glucosyltransferase activity	1.45E-03
27	GO:0008374: O-acyltransferase activity	1.45E-03
28	GO:0005459: UDP-galactose transmembrane transporter activity	1.45E-03
29	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.45E-03
30	GO:0000210: NAD+ diphosphatase activity	1.78E-03
31	GO:0004709: MAP kinase kinase kinase activity	1.78E-03
32	GO:0019900: kinase binding	2.14E-03
33	GO:0008195: phosphatidate phosphatase activity	2.14E-03
34	GO:0004620: phospholipase activity	2.52E-03
35	GO:0005338: nucleotide-sugar transmembrane transporter activity	2.52E-03
36	GO:0016621: cinnamoyl-CoA reductase activity	2.52E-03
37	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.91E-03
38	GO:0008515: sucrose transmembrane transporter activity	5.19E-03
39	GO:0008559: xenobiotic-transporting ATPase activity	5.19E-03
40	GO:0047372: acylglycerol lipase activity	5.19E-03
41	GO:0015095: magnesium ion transmembrane transporter activity	6.22E-03
42	GO:0005262: calcium channel activity	6.22E-03
43	GO:0000175: 3'-5'-exoribonuclease activity	6.22E-03
44	GO:0008234: cysteine-type peptidase activity	6.63E-03
45	GO:0004535: poly(A)-specific ribonuclease activity	6.76E-03
46	GO:0030552: cAMP binding	7.32E-03
47	GO:0030553: cGMP binding	7.32E-03
48	GO:0005216: ion channel activity	9.09E-03
49	GO:0033612: receptor serine/threonine kinase binding	9.72E-03
50	GO:0008408: 3'-5' exonuclease activity	9.72E-03
51	GO:0004540: ribonuclease activity	9.72E-03
52	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.04E-02
53	GO:0015144: carbohydrate transmembrane transporter activity	1.28E-02
54	GO:0030551: cyclic nucleotide binding	1.31E-02
55	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.38E-02
56	GO:0005351: sugar:proton symporter activity	1.44E-02
57	GO:0050662: coenzyme binding	1.45E-02
58	GO:0004197: cysteine-type endopeptidase activity	1.67E-02
59	GO:0004842: ubiquitin-protein transferase activity	2.10E-02
60	GO:0004672: protein kinase activity	2.30E-02
61	GO:0004721: phosphoprotein phosphatase activity	2.33E-02
62	GO:0030247: polysaccharide binding	2.33E-02
63	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.42E-02
64	GO:0030246: carbohydrate binding	2.73E-02
65	GO:0061630: ubiquitin protein ligase activity	2.99E-02
66	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.16E-02
67	GO:0015293: symporter activity	3.86E-02
68	GO:0051287: NAD binding	4.07E-02
69	GO:0005509: calcium ion binding	4.09E-02
70	GO:0003924: GTPase activity	4.18E-02
71	GO:0016298: lipase activity	4.50E-02
72	GO:0044212: transcription regulatory region DNA binding	4.52E-02
73	GO:0031625: ubiquitin protein ligase binding	4.72E-02
74	GO:0045735: nutrient reservoir activity	4.94E-02
75	GO:0008270: zinc ion binding	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	7.24E-08
2	GO:0005887: integral component of plasma membrane	1.13E-04
3	GO:0030014: CCR4-NOT complex	1.62E-04
4	GO:0008076: voltage-gated potassium channel complex	8.63E-04
5	GO:0030173: integral component of Golgi membrane	2.14E-03
6	GO:0016021: integral component of membrane	5.81E-03
7	GO:0030176: integral component of endoplasmic reticulum membrane	7.32E-03
8	GO:0005769: early endosome	7.90E-03
9	GO:0043234: protein complex	7.90E-03
10	GO:0000325: plant-type vacuole	2.78E-02
11	GO:0090406: pollen tube	3.55E-02
12	GO:0043231: intracellular membrane-bounded organelle	4.60E-02