Gene: AT4G28490
     

Gene description


TAIR ID: AT4G28490

Short description: Leucine-rich receptor-like protein kinase family protein

Pathogen responsiveness: 0.48

General responsiveness: -0.93

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


floral organ abscission, pectin catabolic process, protein autophosphorylation, protein phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, lateral root morphogenesis, regulation of gene expression


GO cellular component


plasma membrane, integral component of membrane


GO molecular function


protein serine/threonine kinase activity, protein kinase activity, transmembrane receptor protein tyrosine kinase activity, kinase activity, ATP binding, protein binding


Protein domain


PfamPF08263, Leucine rich repeat N-terminal domain
PfamPF13855, Leucine rich repeat
PfamPF00069, Protein kinase domain
SMARTSM00369, LRR_TYP
SMARTSM00220, S_TKc

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 9 (Top20%)

click to view PPI network

Differentially expressed condition


30 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d1.641.62E-05
GSE17464Penta, controlPenta, PstDC3000 12 h2.065.88E-06
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h2.171.69E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.741.39E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.396.62E-05
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h1.686.14E-12
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h2.273.09E-14
GSE18329Col, wrky72_1, controlCol, wrky72_2, Hpa noco2 96 h2.022.15E-13
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.734.01E-09
GSE26206Col, WT, controlCol, WT, R.solani_AG8 7 d1.781.61E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.775.98E-10
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.708.20E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt21.637.40E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 EV1.666.00E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h3.894.98E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.621.39E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h3.393.02E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.355.88E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.392.62E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.371.54E-10
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.904.56E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.708.63E-12
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.352.53E-10
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.517.11E-04
GSE5616Col, WT, water 24 hCol, WT, P. infestans 24 h1.626.28E-06
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h1.671.17E-06
GSE5685Col, WT, control 24 hCol, WT, Ps ES4326 24 h1.921.12E-02
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h2.151.91E-05
GSE73351Ws-4, map65_3, controlWs-4, map65_3, H.ara Emwa1 3 d1.581.01E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h1.839.30E-03






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