gene detail

Gene description

TAIR ID: AT4G23750

Short description: cytokinin response factor 2

Pathogen responsiveness: -0.64

General responsiveness: -0.62

Orthologous

Rice:

OS01G0224100

Maize:

GRMZM2G142179

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, cotyledon development, cytokinin-activated signaling pathway, root development, ethylene-activated signaling pathway, transcription factor import into nucleus, transcription

GO cellular component

nucleus, cytoplasm

GO molecular function

protein binding, identical protein binding, transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF00847, AP2 domain
SMART	SM00380, AP2

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT2G20180, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 17 (Top10%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

16 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	-1.88	8.08E-07
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.80	5.04E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-2.08	9.53E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-2.10	1.28E-04
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.25	8.60E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-1.83	3.40E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-1.71	5.43E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-1.64	7.74E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	-1.63	1.58E-02
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.83	6.66E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.84	7.72E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.71	1.42E-13
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.91	9.28E-13
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-3.04	9.45E-03
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-2.00	2.16E-07
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-2.46	1.31E-08