gene detail

Gene description

TAIR ID: AT4G19830

Short description: FKBP-like peptidyl-prolyl cis-trans isomerase family protein

Pathogen responsiveness: -0.92

General responsiveness: 0.42

Orthologous

Rice:

OS02G0168700

Maize:

GRMZM2G041060

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

chloroplast thylakoid lumen

GO molecular function

peptidyl-prolyl cis-trans isomerase activity

Protein domain

Pfam	PF00254, FKBP-type peptidyl-prolyl cis-trans isomerase

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT4G18770, AT2G43010

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.73	1.89E-08
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.02	8.02E-17
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.60	1.03E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.01	6.45E-17
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.54	4.78E-03