Gene: AT4G19530
     

Gene description


TAIR ID: AT4G19530

Short description: disease resistance protein (TIR-NBS-LRR class) family

Pathogen responsiveness: 0.99

General responsiveness: 2.61

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


defense response signaling pathway, resistance gene-dependent, defense response


GO cellular component


nucleus


GO molecular function


unkown


Protein domain


PfamPF07725, Leucine Rich Repeat
PfamPF01582, TIR domain
PfamPF00931, NB-ARC domain
SMARTSM00255, TIR

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT2G38250, AT3G27920, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


40 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d-1.596.28E-06
GSE17464Laer, controlLaer, Flg22 2 h-1.761.13E-03
GSE17464Penta, controlPenta, Flg22 2 h-1.642.24E-03
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.961.43E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.421.41E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.911.51E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-4.307.53E-11
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-1.532.15E-05
GSE21920Col, ulp1, mockCol, ulp1, Pto 6 h-1.746.41E-05
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.041.07E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.282.45E-03
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.574.71E-14
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-3.243.78E-04
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-2.821.11E-03
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-3.211.89E-07
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-1.903.46E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-3.085.65E-09
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-3.319.00E-14
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-2.073.13E-06
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.952.39E-11
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-2.141.31E-06
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-3.427.02E-14
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h-1.982.26E-05
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-3.131.38E-12
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h-1.781.10E-04
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h-1.643.06E-04
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h-2.567.55E-08
GSE56094Col, WT, control 5 hCol, WT, hrpA- 5 h-1.693.41E-04
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-2.371.71E-07
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h-1.654.14E-04
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.801.14E-09
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h-2.172.36E-06
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-2.583.33E-09
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-2.092.28E-06
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-2.765.11E-10
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.951.38E-05
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.871.95E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 HrpA- 12 h-1.644.81E-07
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.281.83E-09
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-2.391.78E-04






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.