Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G19530

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033494: ferulate metabolic process0.00E+00
2GO:0005996: monosaccharide metabolic process0.00E+00
3GO:0007638: mechanosensory behavior0.00E+00
4GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
5GO:0015976: carbon utilization4.81E-07
6GO:0006810: transport2.87E-05
7GO:0071554: cell wall organization or biogenesis3.18E-05
8GO:2000122: negative regulation of stomatal complex development6.35E-05
9GO:0006546: glycine catabolic process6.35E-05
10GO:0010037: response to carbon dioxide6.35E-05
11GO:0010411: xyloglucan metabolic process8.90E-05
12GO:0006833: water transport1.04E-04
13GO:0010190: cytochrome b6f complex assembly1.45E-04
14GO:0010555: response to mannitol1.97E-04
15GO:0009955: adaxial/abaxial pattern specification1.97E-04
16GO:0006633: fatty acid biosynthetic process2.56E-04
17GO:0042546: cell wall biogenesis2.70E-04
18GO:0042335: cuticle development2.90E-04
19GO:0034220: ion transmembrane transport2.90E-04
20GO:0010442: guard cell morphogenesis3.14E-04
21GO:0071370: cellular response to gibberellin stimulus3.14E-04
22GO:0006723: cuticle hydrocarbon biosynthetic process3.14E-04
23GO:0042547: cell wall modification involved in multidimensional cell growth3.14E-04
24GO:0009409: response to cold3.67E-04
25GO:0032544: plastid translation3.98E-04
26GO:0010583: response to cyclopentenone4.63E-04
27GO:0007267: cell-cell signaling5.88E-04
28GO:0006695: cholesterol biosynthetic process6.87E-04
29GO:0015786: UDP-glucose transport6.87E-04
30GO:0060919: auxin influx6.87E-04
31GO:0080151: positive regulation of salicylic acid mediated signaling pathway6.87E-04
32GO:0030388: fructose 1,6-bisphosphate metabolic process6.87E-04
33GO:2000123: positive regulation of stomatal complex development6.87E-04
34GO:0052541: plant-type cell wall cellulose metabolic process6.87E-04
35GO:0009773: photosynthetic electron transport in photosystem I7.62E-04
36GO:0000038: very long-chain fatty acid metabolic process7.62E-04
37GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.05E-03
38GO:0006000: fructose metabolic process1.11E-03
39GO:0043447: alkane biosynthetic process1.11E-03
40GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.11E-03
41GO:0015840: urea transport1.11E-03
42GO:0006696: ergosterol biosynthetic process1.11E-03
43GO:0015783: GDP-fucose transport1.11E-03
44GO:0010167: response to nitrate1.24E-03
45GO:0010025: wax biosynthetic process1.37E-03
46GO:0006241: CTP biosynthetic process1.60E-03
47GO:0072334: UDP-galactose transmembrane transport1.60E-03
48GO:0080170: hydrogen peroxide transmembrane transport1.60E-03
49GO:0051016: barbed-end actin filament capping1.60E-03
50GO:0001678: cellular glucose homeostasis1.60E-03
51GO:0006165: nucleoside diphosphate phosphorylation1.60E-03
52GO:0006228: UTP biosynthetic process1.60E-03
53GO:0009855: determination of bilateral symmetry1.60E-03
54GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.60E-03
55GO:1902476: chloride transmembrane transport1.60E-03
56GO:0007231: osmosensory signaling pathway1.60E-03
57GO:0007623: circadian rhythm1.61E-03
58GO:0061077: chaperone-mediated protein folding1.84E-03
59GO:0042742: defense response to bacterium1.86E-03
60GO:0071555: cell wall organization1.86E-03
61GO:0006183: GTP biosynthetic process2.14E-03
62GO:0045727: positive regulation of translation2.14E-03
63GO:0033500: carbohydrate homeostasis2.14E-03
64GO:2000038: regulation of stomatal complex development2.14E-03
65GO:0006749: glutathione metabolic process2.14E-03
66GO:0019464: glycine decarboxylation via glycine cleavage system2.14E-03
67GO:0009765: photosynthesis, light harvesting2.14E-03
68GO:0055085: transmembrane transport2.37E-03
69GO:0019722: calcium-mediated signaling2.39E-03
70GO:0016117: carotenoid biosynthetic process2.59E-03
71GO:0010375: stomatal complex patterning2.74E-03
72GO:0046785: microtubule polymerization2.74E-03
73GO:0016120: carotene biosynthetic process2.74E-03
74GO:0016123: xanthophyll biosynthetic process2.74E-03
75GO:0000413: protein peptidyl-prolyl isomerization2.80E-03
76GO:0016554: cytidine to uridine editing3.38E-03
77GO:0042549: photosystem II stabilization3.38E-03
78GO:0010014: meristem initiation4.06E-03
79GO:0042372: phylloquinone biosynthetic process4.06E-03
80GO:0080060: integument development4.06E-03
81GO:0045926: negative regulation of growth4.06E-03
82GO:0046835: carbohydrate phosphorylation4.06E-03
83GO:0009612: response to mechanical stimulus4.06E-03
84GO:1901259: chloroplast rRNA processing4.06E-03
85GO:0009554: megasporogenesis4.06E-03
86GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity4.06E-03
87GO:2000067: regulation of root morphogenesis4.06E-03
88GO:0080167: response to karrikin4.37E-03
89GO:0030497: fatty acid elongation4.80E-03
90GO:0006821: chloride transport4.80E-03
91GO:0009645: response to low light intensity stimulus4.80E-03
92GO:0015979: photosynthesis5.34E-03
93GO:0016126: sterol biosynthetic process5.37E-03
94GO:0006402: mRNA catabolic process5.57E-03
95GO:0008610: lipid biosynthetic process5.57E-03
96GO:0030091: protein repair5.57E-03
97GO:0009642: response to light intensity5.57E-03
98GO:0045010: actin nucleation5.57E-03
99GO:0007155: cell adhesion5.57E-03
100GO:0007186: G-protein coupled receptor signaling pathway6.39E-03
101GO:0009657: plastid organization6.39E-03
102GO:0017004: cytochrome complex assembly6.39E-03
103GO:0009932: cell tip growth6.39E-03
104GO:0006002: fructose 6-phosphate metabolic process6.39E-03
105GO:0009817: defense response to fungus, incompatible interaction7.02E-03
106GO:0010206: photosystem II repair7.24E-03
107GO:0045337: farnesyl diphosphate biosynthetic process7.24E-03
108GO:0033384: geranyl diphosphate biosynthetic process7.24E-03
109GO:0006754: ATP biosynthetic process7.24E-03
110GO:0009407: toxin catabolic process7.74E-03
111GO:0045490: pectin catabolic process8.09E-03
112GO:0010119: regulation of stomatal movement8.12E-03
113GO:1900865: chloroplast RNA modification8.14E-03
114GO:0016573: histone acetylation8.14E-03
115GO:0016051: carbohydrate biosynthetic process8.90E-03
116GO:0043069: negative regulation of programmed cell death9.07E-03
117GO:0048829: root cap development9.07E-03
118GO:0006816: calcium ion transport1.00E-02
119GO:0019684: photosynthesis, light reaction1.00E-02
120GO:0010072: primary shoot apical meristem specification1.00E-02
121GO:0009089: lysine biosynthetic process via diaminopimelate1.00E-02
122GO:0006415: translational termination1.00E-02
123GO:1903507: negative regulation of nucleic acid-templated transcription1.00E-02
124GO:0000272: polysaccharide catabolic process1.00E-02
125GO:0009750: response to fructose1.00E-02
126GO:0018119: peptidyl-cysteine S-nitrosylation1.00E-02
127GO:0015706: nitrate transport1.11E-02
128GO:0006790: sulfur compound metabolic process1.11E-02
129GO:0009744: response to sucrose1.15E-02
130GO:2000028: regulation of photoperiodism, flowering1.21E-02
131GO:0030036: actin cytoskeleton organization1.21E-02
132GO:0050826: response to freezing1.21E-02
133GO:0009725: response to hormone1.21E-02
134GO:0006094: gluconeogenesis1.21E-02
135GO:0009767: photosynthetic electron transport chain1.21E-02
136GO:0005986: sucrose biosynthetic process1.21E-02
137GO:0009636: response to toxic substance1.29E-02
138GO:0010143: cutin biosynthetic process1.32E-02
139GO:0010207: photosystem II assembly1.32E-02
140GO:0019253: reductive pentose-phosphate cycle1.32E-02
141GO:0048768: root hair cell tip growth1.32E-02
142GO:0005985: sucrose metabolic process1.43E-02
143GO:0070588: calcium ion transmembrane transport1.43E-02
144GO:0046854: phosphatidylinositol phosphorylation1.43E-02
145GO:0006636: unsaturated fatty acid biosynthetic process1.54E-02
146GO:0009833: plant-type primary cell wall biogenesis1.54E-02
147GO:0006071: glycerol metabolic process1.54E-02
148GO:0051603: proteolysis involved in cellular protein catabolic process1.61E-02
149GO:0009944: polarity specification of adaxial/abaxial axis1.66E-02
150GO:0080147: root hair cell development1.66E-02
151GO:0006338: chromatin remodeling1.66E-02
152GO:0019344: cysteine biosynthetic process1.66E-02
153GO:0010026: trichome differentiation1.78E-02
154GO:0007017: microtubule-based process1.78E-02
155GO:0009768: photosynthesis, light harvesting in photosystem I1.78E-02
156GO:0009416: response to light stimulus1.88E-02
157GO:0003333: amino acid transmembrane transport1.91E-02
158GO:0009814: defense response, incompatible interaction2.03E-02
159GO:2000022: regulation of jasmonic acid mediated signaling pathway2.03E-02
160GO:0080092: regulation of pollen tube growth2.03E-02
161GO:0019748: secondary metabolic process2.03E-02
162GO:0042545: cell wall modification2.15E-02
163GO:0009294: DNA mediated transformation2.16E-02
164GO:0006284: base-excision repair2.29E-02
165GO:0009742: brassinosteroid mediated signaling pathway2.35E-02
166GO:0042631: cellular response to water deprivation2.57E-02
167GO:0000271: polysaccharide biosynthetic process2.57E-02
168GO:0080022: primary root development2.57E-02
169GO:0045489: pectin biosynthetic process2.71E-02
170GO:0009741: response to brassinosteroid2.71E-02
171GO:0009749: response to glucose3.00E-02
172GO:0019252: starch biosynthetic process3.00E-02
173GO:0048235: pollen sperm cell differentiation3.30E-02
174GO:0010090: trichome morphogenesis3.45E-02
175GO:1901657: glycosyl compound metabolic process3.45E-02
176GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.25E-02
177GO:0007166: cell surface receptor signaling pathway4.37E-02
178GO:0042128: nitrate assimilation4.42E-02
179GO:0009617: response to bacterium4.56E-02
180GO:0018298: protein-chromophore linkage4.93E-02
181GO:0006508: proteolysis4.95E-02
RankGO TermAdjusted P value
1GO:0048307: ferredoxin-nitrite reductase activity0.00E+00
2GO:0050613: delta14-sterol reductase activity0.00E+00
3GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
4GO:0045435: lycopene epsilon cyclase activity0.00E+00
5GO:0050421: nitrite reductase (NO-forming) activity0.00E+00
6GO:0046905: phytoene synthase activity0.00E+00
7GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
8GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
9GO:0047889: ferredoxin-nitrate reductase activity0.00E+00
10GO:0016762: xyloglucan:xyloglucosyl transferase activity3.18E-05
11GO:0016722: oxidoreductase activity, oxidizing metal ions5.23E-05
12GO:0016413: O-acetyltransferase activity5.86E-05
13GO:0004089: carbonate dehydratase activity6.06E-05
14GO:0016798: hydrolase activity, acting on glycosyl bonds8.90E-05
15GO:0009922: fatty acid elongase activity1.00E-04
16GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.04E-04
17GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.04E-04
18GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.04E-04
19GO:0080132: fatty acid alpha-hydroxylase activity3.14E-04
20GO:0003838: sterol 24-C-methyltransferase activity3.14E-04
21GO:0009671: nitrate:proton symporter activity3.14E-04
22GO:0051996: squalene synthase activity3.14E-04
23GO:0047259: glucomannan 4-beta-mannosyltransferase activity3.14E-04
24GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.26E-04
25GO:0015250: water channel activity6.81E-04
26GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase6.87E-04
27GO:0004310: farnesyl-diphosphate farnesyltransferase activity6.87E-04
28GO:0042389: omega-3 fatty acid desaturase activity6.87E-04
29GO:0010297: heteropolysaccharide binding6.87E-04
30GO:0004047: aminomethyltransferase activity6.87E-04
31GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity6.87E-04
32GO:0019843: rRNA binding9.93E-04
33GO:0050734: hydroxycinnamoyltransferase activity1.11E-03
34GO:0031683: G-protein beta/gamma-subunit complex binding1.11E-03
35GO:0005457: GDP-fucose transmembrane transporter activity1.11E-03
36GO:0001664: G-protein coupled receptor binding1.11E-03
37GO:0005528: FK506 binding1.52E-03
38GO:0004375: glycine dehydrogenase (decarboxylating) activity1.60E-03
39GO:0016149: translation release factor activity, codon specific1.60E-03
40GO:0005460: UDP-glucose transmembrane transporter activity1.60E-03
41GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.60E-03
42GO:0004550: nucleoside diphosphate kinase activity1.60E-03
43GO:0004185: serine-type carboxypeptidase activity1.76E-03
44GO:0010328: auxin influx transmembrane transporter activity2.14E-03
45GO:0005253: anion channel activity2.14E-03
46GO:0005536: glucose binding2.14E-03
47GO:0015204: urea transmembrane transporter activity2.14E-03
48GO:0004659: prenyltransferase activity2.14E-03
49GO:0004396: hexokinase activity2.14E-03
50GO:0019158: mannokinase activity2.14E-03
51GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.14E-03
52GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.56E-03
53GO:0005459: UDP-galactose transmembrane transporter activity2.74E-03
54GO:0008725: DNA-3-methyladenine glycosylase activity2.74E-03
55GO:0016208: AMP binding3.38E-03
56GO:0042578: phosphoric ester hydrolase activity3.38E-03
57GO:0005247: voltage-gated chloride channel activity3.38E-03
58GO:0019901: protein kinase binding3.47E-03
59GO:0030599: pectinesterase activity3.73E-03
60GO:0033743: peptide-methionine (R)-S-oxide reductase activity4.06E-03
61GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity4.06E-03
62GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity4.06E-03
63GO:0051753: mannan synthase activity4.06E-03
64GO:0004723: calcium-dependent protein serine/threonine phosphatase activity4.06E-03
65GO:0051920: peroxiredoxin activity4.06E-03
66GO:0004564: beta-fructofuranosidase activity5.57E-03
67GO:0016209: antioxidant activity5.57E-03
68GO:0004871: signal transducer activity6.16E-03
69GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water6.39E-03
70GO:0004337: geranyltranstransferase activity7.24E-03
71GO:0008889: glycerophosphodiester phosphodiesterase activity7.24E-03
72GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism7.24E-03
73GO:0003747: translation release factor activity7.24E-03
74GO:0004575: sucrose alpha-glucosidase activity8.14E-03
75GO:0015112: nitrate transmembrane transporter activity8.14E-03
76GO:0005089: Rho guanyl-nucleotide exchange factor activity1.00E-02
77GO:0004161: dimethylallyltranstransferase activity1.00E-02
78GO:0004364: glutathione transferase activity1.10E-02
79GO:0005262: calcium channel activity1.21E-02
80GO:0031409: pigment binding1.54E-02
81GO:0003714: transcription corepressor activity1.66E-02
82GO:0045330: aspartyl esterase activity1.72E-02
83GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.90E-02
84GO:0004650: polygalacturonase activity2.02E-02
85GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.03E-02
86GO:0022857: transmembrane transporter activity2.09E-02
87GO:0003824: catalytic activity2.14E-02
88GO:0030570: pectate lyase activity2.16E-02
89GO:0016746: transferase activity, transferring acyl groups2.28E-02
90GO:0008514: organic anion transmembrane transporter activity2.29E-02
91GO:0050662: coenzyme binding2.85E-02
92GO:0004872: receptor activity3.00E-02
93GO:0048038: quinone binding3.15E-02
94GO:0000156: phosphorelay response regulator activity3.45E-02
95GO:0051015: actin filament binding3.45E-02
96GO:0004672: protein kinase activity3.48E-02
97GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.57E-02
98GO:0016759: cellulose synthase activity3.61E-02
99GO:0008483: transaminase activity3.77E-02
100GO:0005200: structural constituent of cytoskeleton3.77E-02
101GO:0016168: chlorophyll binding4.25E-02
102GO:0009931: calcium-dependent protein serine/threonine kinase activity4.42E-02
103GO:0102483: scopolin beta-glucosidase activity4.59E-02
104GO:0004683: calmodulin-dependent protein kinase activity4.59E-02
105GO:0005509: calcium ion binding4.68E-02
106GO:0008236: serine-type peptidase activity4.76E-02
107GO:0042802: identical protein binding4.84E-02
RankGO TermAdjusted P value
1GO:0048046: apoplast7.84E-13
2GO:0009543: chloroplast thylakoid lumen1.49E-10
3GO:0009535: chloroplast thylakoid membrane4.83E-10
4GO:0009507: chloroplast5.84E-09
5GO:0031977: thylakoid lumen4.07E-08
6GO:0009505: plant-type cell wall4.16E-08
7GO:0009579: thylakoid4.38E-07
8GO:0005618: cell wall1.25E-06
9GO:0031225: anchored component of membrane1.59E-06
10GO:0009941: chloroplast envelope3.59E-06
11GO:0046658: anchored component of plasma membrane9.61E-06
12GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.77E-05
13GO:0009570: chloroplast stroma2.43E-05
14GO:0005576: extracellular region2.70E-05
15GO:0030095: chloroplast photosystem II7.33E-05
16GO:0009654: photosystem II oxygen evolving complex1.40E-04
17GO:0009344: nitrite reductase complex [NAD(P)H]3.14E-04
18GO:0019898: extrinsic component of membrane3.89E-04
19GO:0010319: stromule5.88E-04
20GO:0009506: plasmodesma6.08E-04
21GO:0042170: plastid membrane6.87E-04
22GO:0000427: plastid-encoded plastid RNA polymerase complex6.87E-04
23GO:0005960: glycine cleavage complex1.60E-03
24GO:0005775: vacuolar lumen1.60E-03
25GO:0005886: plasma membrane1.84E-03
26GO:0009534: chloroplast thylakoid2.14E-03
27GO:0016020: membrane2.68E-03
28GO:0016021: integral component of membrane2.88E-03
29GO:0034707: chloride channel complex3.38E-03
30GO:0000139: Golgi membrane3.61E-03
31GO:0000123: histone acetyltransferase complex4.80E-03
32GO:0042807: central vacuole4.80E-03
33GO:0010287: plastoglobule5.01E-03
34GO:0005773: vacuole5.18E-03
35GO:0000326: protein storage vacuole6.39E-03
36GO:0045298: tubulin complex7.24E-03
37GO:0005763: mitochondrial small ribosomal subunit7.24E-03
38GO:0005794: Golgi apparatus8.21E-03
39GO:0016324: apical plasma membrane9.07E-03
40GO:0055028: cortical microtubule9.07E-03
41GO:0031307: integral component of mitochondrial outer membrane1.11E-02
42GO:0031012: extracellular matrix1.21E-02
43GO:0005887: integral component of plasma membrane1.25E-02
44GO:0030176: integral component of endoplasmic reticulum membrane1.43E-02
45GO:0030076: light-harvesting complex1.43E-02
46GO:0005875: microtubule associated complex1.54E-02
47GO:0005758: mitochondrial intermembrane space1.66E-02
48GO:0031969: chloroplast membrane1.85E-02
49GO:0009522: photosystem I2.85E-02
50GO:0005789: endoplasmic reticulum membrane3.71E-02
51GO:0005778: peroxisomal membrane3.77E-02
52GO:0009705: plant-type vacuole membrane3.83E-02
53GO:0030529: intracellular ribonucleoprotein complex4.09E-02
Gene type



Gene DE type