gene detail

Gene description

TAIR ID: AT4G16980

Short description: arabinogalactan-protein family

Pathogen responsiveness: -0.36

General responsiveness: -1.39

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

plasma membrane

GO molecular function

unkown

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 5

Coexpression network

Differentially expressed condition

16 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-3.06	2.14E-10
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.81	4.29E-07
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.38	9.01E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.86	3.05E-07
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-3.35	5.43E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.06	1.21E-10
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-3.63	2.87E-19
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-2.28	6.57E-10
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-2.27	7.49E-10
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-2.30	3.32E-10
GSE56094	Col, WT, control 4 h	Col, WT, PstDC3000 4 h	-1.57	5.42E-05
GSE56094	Col, WT, control 5 h	Col, WT, PstDC3000 5 h	-2.13	1.32E-07
GSE56094	Col, WT, control 6 h	Col, WT, PstDC3000 6 h	-2.68	2.58E-11
GSE56094	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.23	1.01E-08
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	-2.83	3.45E-13
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	-2.37	4.18E-10