Gene: AT4G16980
     


Gene description


TAIR ID: AT4G16980

Short description: arabinogalactan-protein family

Pathogen responsiveness: -0.36

General responsiveness: -1.39

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


plasma membrane


GO molecular function


unkown


Protein domain


No domain annotation

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


16 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-3.062.14E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.814.29E-07
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.389.01E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.863.05E-07
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.355.43E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.061.21E-10
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-3.632.87E-19
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.286.57E-10
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.277.49E-10
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.303.32E-10
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h-1.575.42E-05
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h-2.131.32E-07
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-2.682.58E-11
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.231.01E-08
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-2.833.45E-13
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-2.374.18E-10






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.