gene detail

Gene description

TAIR ID: AT4G16410

No short description

Pathogen responsiveness: NA

General responsiveness: 2.42

Orthologous

Rice: No orthologous gene

Maize:

GRMZM5G823826

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

chloroplast, integral component of membrane

GO molecular function

molecular_function

Protein domain

Pfam	PF05421, Protein of unknown function (DUF751)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G14230

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

21 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, erf104 ko, water 4 h	Col, erf104 ko, Flg22 4 h	-1.95	3.09E-02
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	-1.96	4.32E-04
GSE17464	Laer, control	Laer, Flg22 2 h	-2.06	4.06E-05
GSE17464	Penta, control	Penta, Flg22 2 h	-1.63	7.97E-04
GSE17464	Penta, control	Penta, Flg22 2 h	-2.41	3.33E-06
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.60	7.53E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.94	1.00E-04
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.65	5.13E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-3.26	4.96E-11
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	-1.60	4.66E-06
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.66	2.59E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.59	5.28E-08
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.70	2.34E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.78	1.03E-08
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-3.31	1.03E-12
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.51	8.46E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.51	1.56E-13
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.52	4.02E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.66	1.94E-05
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.10	1.15E-03
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.94	3.30E-05