GO Enrichment Analysis of Co-expressed Genes with
AT4G16410
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015822: ornithine transport | 0.00E+00 |
| 2 | GO:0034220: ion transmembrane transport | 4.93E-06 |
| 3 | GO:0071482: cellular response to light stimulus | 2.16E-05 |
| 4 | GO:0006810: transport | 4.58E-05 |
| 5 | GO:0010362: negative regulation of anion channel activity by blue light | 4.60E-05 |
| 6 | GO:0000481: maturation of 5S rRNA | 4.60E-05 |
| 7 | GO:0042371: vitamin K biosynthetic process | 4.60E-05 |
| 8 | GO:0071461: cellular response to redox state | 4.60E-05 |
| 9 | GO:0000066: mitochondrial ornithine transport | 4.60E-05 |
| 10 | GO:0034337: RNA folding | 4.60E-05 |
| 11 | GO:0009767: photosynthetic electron transport chain | 6.58E-05 |
| 12 | GO:0006833: water transport | 9.77E-05 |
| 13 | GO:0080005: photosystem stoichiometry adjustment | 1.13E-04 |
| 14 | GO:0010541: acropetal auxin transport | 1.13E-04 |
| 15 | GO:0010155: regulation of proton transport | 1.13E-04 |
| 16 | GO:0010160: formation of animal organ boundary | 1.95E-04 |
| 17 | GO:0080170: hydrogen peroxide transmembrane transport | 2.85E-04 |
| 18 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 2.85E-04 |
| 19 | GO:0010731: protein glutathionylation | 2.85E-04 |
| 20 | GO:2001141: regulation of RNA biosynthetic process | 2.85E-04 |
| 21 | GO:0019464: glycine decarboxylation via glycine cleavage system | 3.84E-04 |
| 22 | GO:0030104: water homeostasis | 3.84E-04 |
| 23 | GO:0006546: glycine catabolic process | 3.84E-04 |
| 24 | GO:0043097: pyrimidine nucleoside salvage | 4.88E-04 |
| 25 | GO:0009904: chloroplast accumulation movement | 4.88E-04 |
| 26 | GO:0018298: protein-chromophore linkage | 5.38E-04 |
| 27 | GO:0006811: ion transport | 5.92E-04 |
| 28 | GO:0006206: pyrimidine nucleobase metabolic process | 5.98E-04 |
| 29 | GO:0060918: auxin transport | 5.98E-04 |
| 30 | GO:0009637: response to blue light | 6.76E-04 |
| 31 | GO:0009903: chloroplast avoidance movement | 7.13E-04 |
| 32 | GO:0009854: oxidative photosynthetic carbon pathway | 7.13E-04 |
| 33 | GO:0010019: chloroplast-nucleus signaling pathway | 7.13E-04 |
| 34 | GO:0009645: response to low light intensity stimulus | 8.33E-04 |
| 35 | GO:0032508: DNA duplex unwinding | 9.57E-04 |
| 36 | GO:0052543: callose deposition in cell wall | 9.57E-04 |
| 37 | GO:0017004: cytochrome complex assembly | 1.09E-03 |
| 38 | GO:0006754: ATP biosynthetic process | 1.22E-03 |
| 39 | GO:0009638: phototropism | 1.36E-03 |
| 40 | GO:0043069: negative regulation of programmed cell death | 1.51E-03 |
| 41 | GO:0043085: positive regulation of catalytic activity | 1.66E-03 |
| 42 | GO:0006352: DNA-templated transcription, initiation | 1.66E-03 |
| 43 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.66E-03 |
| 44 | GO:0009684: indoleacetic acid biosynthetic process | 1.66E-03 |
| 45 | GO:0008361: regulation of cell size | 1.81E-03 |
| 46 | GO:0009785: blue light signaling pathway | 1.98E-03 |
| 47 | GO:0019253: reductive pentose-phosphate cycle | 2.14E-03 |
| 48 | GO:0010207: photosystem II assembly | 2.14E-03 |
| 49 | GO:0010540: basipetal auxin transport | 2.14E-03 |
| 50 | GO:0042343: indole glucosinolate metabolic process | 2.31E-03 |
| 51 | GO:0006633: fatty acid biosynthetic process | 2.49E-03 |
| 52 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.49E-03 |
| 53 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.85E-03 |
| 54 | GO:0055085: transmembrane transport | 2.95E-03 |
| 55 | GO:0098542: defense response to other organism | 3.04E-03 |
| 56 | GO:0048443: stamen development | 3.63E-03 |
| 57 | GO:0042631: cellular response to water deprivation | 4.04E-03 |
| 58 | GO:0009958: positive gravitropism | 4.25E-03 |
| 59 | GO:0009639: response to red or far red light | 5.60E-03 |
| 60 | GO:0071805: potassium ion transmembrane transport | 5.84E-03 |
| 61 | GO:0015979: photosynthesis | 5.94E-03 |
| 62 | GO:0009627: systemic acquired resistance | 6.82E-03 |
| 63 | GO:0015995: chlorophyll biosynthetic process | 7.08E-03 |
| 64 | GO:0010411: xyloglucan metabolic process | 7.08E-03 |
| 65 | GO:0009409: response to cold | 7.81E-03 |
| 66 | GO:0000160: phosphorelay signal transduction system | 7.87E-03 |
| 67 | GO:0010218: response to far red light | 8.14E-03 |
| 68 | GO:0009631: cold acclimation | 8.41E-03 |
| 69 | GO:0048527: lateral root development | 8.41E-03 |
| 70 | GO:0010119: regulation of stomatal movement | 8.41E-03 |
| 71 | GO:0009853: photorespiration | 8.96E-03 |
| 72 | GO:0006839: mitochondrial transport | 9.82E-03 |
| 73 | GO:0006631: fatty acid metabolic process | 1.01E-02 |
| 74 | GO:0009640: photomorphogenesis | 1.07E-02 |
| 75 | GO:0009926: auxin polar transport | 1.07E-02 |
| 76 | GO:0042546: cell wall biogenesis | 1.10E-02 |
| 77 | GO:0009644: response to high light intensity | 1.13E-02 |
| 78 | GO:0009636: response to toxic substance | 1.16E-02 |
| 79 | GO:0006813: potassium ion transport | 1.32E-02 |
| 80 | GO:0009624: response to nematode | 1.70E-02 |
| 81 | GO:0009058: biosynthetic process | 2.07E-02 |
| 82 | GO:0006413: translational initiation | 2.38E-02 |
| 83 | GO:0055114: oxidation-reduction process | 2.44E-02 |
| 84 | GO:0007623: circadian rhythm | 2.50E-02 |
| 85 | GO:0009414: response to water deprivation | 2.71E-02 |
| 86 | GO:0042742: defense response to bacterium | 2.77E-02 |
| 87 | GO:0009658: chloroplast organization | 3.42E-02 |
| 88 | GO:0080167: response to karrikin | 3.98E-02 |
| 89 | GO:0046777: protein autophosphorylation | 4.18E-02 |
| 90 | GO:0044550: secondary metabolite biosynthetic process | 4.23E-02 |
| 91 | GO:0046686: response to cadmium ion | 4.31E-02 |
| 92 | GO:0006869: lipid transport | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 2 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 3 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 4 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 5 | GO:0016491: oxidoreductase activity | 2.93E-06 |
| 6 | GO:0000293: ferric-chelate reductase activity | 6.25E-06 |
| 7 | GO:0015250: water channel activity | 1.52E-05 |
| 8 | GO:0080132: fatty acid alpha-hydroxylase activity | 4.60E-05 |
| 9 | GO:0004328: formamidase activity | 4.60E-05 |
| 10 | GO:0046906: tetrapyrrole binding | 4.60E-05 |
| 11 | GO:0004312: fatty acid synthase activity | 1.13E-04 |
| 12 | GO:0000064: L-ornithine transmembrane transporter activity | 1.13E-04 |
| 13 | GO:0080045: quercetin 3'-O-glucosyltransferase activity | 1.13E-04 |
| 14 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 1.95E-04 |
| 15 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 2.85E-04 |
| 16 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 2.85E-04 |
| 17 | GO:0009882: blue light photoreceptor activity | 2.85E-04 |
| 18 | GO:0001872: (1->3)-beta-D-glucan binding | 2.85E-04 |
| 19 | GO:0016987: sigma factor activity | 3.84E-04 |
| 20 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 3.84E-04 |
| 21 | GO:0001053: plastid sigma factor activity | 3.84E-04 |
| 22 | GO:0004040: amidase activity | 4.88E-04 |
| 23 | GO:0080046: quercetin 4'-O-glucosyltransferase activity | 5.98E-04 |
| 24 | GO:0004849: uridine kinase activity | 7.13E-04 |
| 25 | GO:0019899: enzyme binding | 8.33E-04 |
| 26 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 1.22E-03 |
| 27 | GO:0004565: beta-galactosidase activity | 1.98E-03 |
| 28 | GO:0010329: auxin efflux transmembrane transporter activity | 1.98E-03 |
| 29 | GO:0031072: heat shock protein binding | 1.98E-03 |
| 30 | GO:0000155: phosphorelay sensor kinase activity | 1.98E-03 |
| 31 | GO:0008266: poly(U) RNA binding | 2.14E-03 |
| 32 | GO:0031409: pigment binding | 2.49E-03 |
| 33 | GO:0015079: potassium ion transmembrane transporter activity | 2.85E-03 |
| 34 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.09E-03 |
| 35 | GO:0008080: N-acetyltransferase activity | 4.25E-03 |
| 36 | GO:0010181: FMN binding | 4.47E-03 |
| 37 | GO:0048038: quinone binding | 4.91E-03 |
| 38 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 4.91E-03 |
| 39 | GO:0005506: iron ion binding | 5.21E-03 |
| 40 | GO:0016168: chlorophyll binding | 6.57E-03 |
| 41 | GO:0030247: polysaccharide binding | 7.08E-03 |
| 42 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 7.08E-03 |
| 43 | GO:0003993: acid phosphatase activity | 9.25E-03 |
| 44 | GO:0004364: glutathione transferase activity | 1.04E-02 |
| 45 | GO:0051287: NAD binding | 1.23E-02 |
| 46 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.32E-02 |
| 47 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.59E-02 |
| 48 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.59E-02 |
| 49 | GO:0051082: unfolded protein binding | 1.70E-02 |
| 50 | GO:0008194: UDP-glycosyltransferase activity | 2.71E-02 |
| 51 | GO:0042802: identical protein binding | 2.97E-02 |
| 52 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.97E-02 |
| 53 | GO:0005215: transporter activity | 3.07E-02 |
| 54 | GO:0016788: hydrolase activity, acting on ester bonds | 3.46E-02 |
| 55 | GO:0004672: protein kinase activity | 4.06E-02 |
| 56 | GO:0003729: mRNA binding | 4.12E-02 |
| 57 | GO:0052689: carboxylic ester hydrolase activity | 4.27E-02 |
| 58 | GO:0042803: protein homodimerization activity | 4.68E-02 |
| 59 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.06E-08 |
| 2 | GO:0009782: photosystem I antenna complex | 4.60E-05 |
| 3 | GO:0043674: columella | 4.60E-05 |
| 4 | GO:0005960: glycine cleavage complex | 2.85E-04 |
| 5 | GO:0048046: apoplast | 3.73E-04 |
| 6 | GO:0009898: cytoplasmic side of plasma membrane | 3.84E-04 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 7.06E-04 |
| 8 | GO:0042807: central vacuole | 8.33E-04 |
| 9 | GO:0009986: cell surface | 8.33E-04 |
| 10 | GO:0009570: chloroplast stroma | 1.21E-03 |
| 11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.22E-03 |
| 12 | GO:0005887: integral component of plasma membrane | 1.56E-03 |
| 13 | GO:0016020: membrane | 1.56E-03 |
| 14 | GO:0032040: small-subunit processome | 1.81E-03 |
| 15 | GO:0030076: light-harvesting complex | 2.31E-03 |
| 16 | GO:0009941: chloroplast envelope | 2.57E-03 |
| 17 | GO:0005773: vacuole | 3.18E-03 |
| 18 | GO:0046658: anchored component of plasma membrane | 3.61E-03 |
| 19 | GO:0009522: photosystem I | 4.47E-03 |
| 20 | GO:0031969: chloroplast membrane | 5.21E-03 |
| 21 | GO:0010319: stromule | 5.84E-03 |
| 22 | GO:0016021: integral component of membrane | 1.09E-02 |
| 23 | GO:0005886: plasma membrane | 1.51E-02 |
| 24 | GO:0005777: peroxisome | 1.57E-02 |
| 25 | GO:0009534: chloroplast thylakoid | 1.65E-02 |
| 26 | GO:0010287: plastoglobule | 1.92E-02 |
| 27 | GO:0009543: chloroplast thylakoid lumen | 1.99E-02 |
| 28 | GO:0031225: anchored component of membrane | 2.14E-02 |
| 29 | GO:0009705: plant-type vacuole membrane | 2.50E-02 |
| 30 | GO:0009536: plastid | 3.40E-02 |
| 31 | GO:0009505: plant-type cell wall | 3.47E-02 |
| 32 | GO:0005743: mitochondrial inner membrane | 4.98E-02 |