Gene: AT4G12980
     

Gene description


TAIR ID: AT4G12980

Short description: Auxin-responsive family protein

Pathogen responsiveness: 1.78

General responsiveness: 1.28

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G066219   GRMZM2G386209  

Wheat:

TA.16218.1.A1_A_AT  TA.16218.1.A1_X_AT  


GO biological process


multicellular organism development, oxidation-reduction process


GO cellular component


membrane, chloroplast, integral component of membrane


GO molecular function


metal ion binding


Protein domain


PfamPF04526, Protein of unknown function (DUF568)
PfamPF03188, Eukaryotic cytochrome b561
SMARTSM00665, B561

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G16110, AT3G27920, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


60 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, mpk6 ko, water 4 hCol, mpk6 ko, Flg22 4 h-2.222.59E-02
GSE12856Col, WT, controlCol, WT, Bg h-1.571.07E-06
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.851.69E-07
GSE13739Col, WT, control 0 hCol, WT, G.orontii 5 d-1.741.02E-02
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h-2.813.51E-05
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d-2.643.18E-05
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h-2.611.17E-04
GSE13739Col, eds, control 7 dCol, eds, G.orontii 7 d-1.681.01E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h-1.522.70E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-1.913.90E-03
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d2.059.68E-04
GSE17464Laer, controlLaer, Flg22 1 h-1.793.48E-03
GSE17464Laer, controlLaer, Flg22 2 h-2.106.00E-04
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d2.321.68E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-3.697.59E-06
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-4.221.15E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-3.489.14E-06
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h-1.681.07E-09
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h-2.073.26E-11
GSE18329Col, wrky72_1, controlCol, wrky72_2, Hpa noco2 96 h-2.452.23E-12
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-5.401.27E-09
GSE20278Col, RPL18-HF, controlCol, RPL18-HF, TuMV 10 d-1.525.00E-02
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-2.851.11E-12
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-3.999.09E-16
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-3.258.10E-14
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-3.742.34E-15
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.251.14E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.942.73E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-2.281.24E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-2.534.77E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-2.369.95E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV-1.722.02E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-5.152.77E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.872.96E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-5.015.62E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-4.708.74E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-3.752.21E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-4.973.62E-15
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.412.63E-10
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-3.041.16E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-4.531.11E-14
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h-1.977.34E-09
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-2.723.81E-02
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.601.06E-04
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-3.071.37E-04
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-2.589.80E-03
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-3.241.92E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.071.21E-03
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.881.59E-09
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.897.32E-09
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.355.25E-13
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h-1.943.09E-08
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.963.15E-18
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h-2.481.52E-12
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h-1.742.04E-02
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h-1.797.91E-07
GSE5685Col, WT, control 16 hCol, WT, Ps ES4326 16 h-1.533.46E-02
GSE5685Col, WT, control 24 hCol, WT, Ps ES4326 24 h-1.684.11E-03
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-4.497.73E-04
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-2.078.52E-05






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