gene detail

Gene description

TAIR ID: AT4G12120

Short description: Sec1/munc18-like (SM) proteins superfamily

Pathogen responsiveness: 0.80

General responsiveness: -1.19

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein transport, vesicle docking involved in exocytosis, protein secretion

GO cellular component

plasma membrane, nucleus

GO molecular function

protein transporter activity

Protein domain

Pfam	PF00995, Sec1 family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G51600, AT1G66600

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

37 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	2.31	1.41E-06
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	3.00	8.98E-08
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 1 h	1.56	8.79E-04
GSE17464	Laer, control	Laer, Flg22 1 h	2.29	1.82E-07
GSE17464	Laer, control	Laer, Flg22 2 h	1.97	7.23E-06
GSE17464	Penta, control	Penta, Flg22 2 h	2.30	1.76E-07
GSE17464	Penta, control	Penta, Flg22 2 h	1.92	9.98E-06
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.78	2.10E-09
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	2.10	7.46E-08
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	2.30	8.02E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	2.31	1.23E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	2.27	1.03E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.71	1.21E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	3.00	2.42E-15
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	2.09	1.06E-11
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.65	4.06E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.89	3.80E-14
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	1.76	2.12E-10
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	2.58	1.95E-11
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	2.64	1.16E-11
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	2.06	1.56E-03
GSE5520	Col, WT, control 7 h	Col, WT, hrpA- 10 h	1.55	4.01E-02
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	1.78	4.81E-09
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	1.91	7.21E-09
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	1.58	6.72E-07
GSE56094	Col, WT, control 12 h	Col, WT, hrpA- 12 h	1.51	7.58E-06
GSE56094	Col, WT, control 4 h	Col, WT, PstDC3000 4 h	1.55	2.36E-06
GSE56094	Col, WT, control 6 h	Col, WT, hrpA- 6 h	1.54	4.32E-06
GSE56094	Col, WT, control 7 h	Col, WT, hrpA- 7 h	1.54	2.83E-06
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	1.97	2.94E-09
GSE5615	Col, WT, GST 4 h	Col, WT, GST+NPP1 4 h	1.72	5.23E-07
GSE5615	Col, WT, water 4 h	Col, WT, Flg22 4 h	1.70	3.41E-07
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	2.58	4.72E-11
GSE5616	Col, WT, water 6 h	Col, WT, P. infestans 6 h	1.91	1.04E-07
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	2.80	2.69E-03
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	2.85	1.19E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	2.78	1.72E-05