co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G12120

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000188: inactivation of MAPK activity	0.00E+00
2	GO:0006182: cGMP biosynthetic process	0.00E+00
3	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
4	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
5	GO:0006105: succinate metabolic process	0.00E+00
6	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
7	GO:0019484: beta-alanine catabolic process	0.00E+00
8	GO:0033587: shikimate biosynthetic process	0.00E+00
9	GO:0010150: leaf senescence	7.36E-06
10	GO:0046686: response to cadmium ion	1.37E-05
11	GO:0009819: drought recovery	5.25E-05
12	GO:0010120: camalexin biosynthetic process	6.66E-05
13	GO:0042759: long-chain fatty acid biosynthetic process	9.50E-05
14	GO:0009450: gamma-aminobutyric acid catabolic process	9.50E-05
15	GO:1990641: response to iron ion starvation	9.50E-05
16	GO:1901183: positive regulation of camalexin biosynthetic process	9.50E-05
17	GO:0009865: pollen tube adhesion	9.50E-05
18	GO:0006540: glutamate decarboxylation to succinate	9.50E-05
19	GO:0042325: regulation of phosphorylation	2.24E-04
20	GO:0010033: response to organic substance	2.24E-04
21	GO:0051258: protein polymerization	2.24E-04
22	GO:0060919: auxin influx	2.24E-04
23	GO:0006101: citrate metabolic process	2.24E-04
24	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	2.24E-04
25	GO:0000162: tryptophan biosynthetic process	2.70E-04
26	GO:0061158: 3'-UTR-mediated mRNA destabilization	3.73E-04
27	GO:0046513: ceramide biosynthetic process	5.37E-04
28	GO:0048194: Golgi vesicle budding	5.37E-04
29	GO:0006020: inositol metabolic process	5.37E-04
30	GO:0009851: auxin biosynthetic process	6.82E-04
31	GO:0006536: glutamate metabolic process	7.14E-04
32	GO:0042273: ribosomal large subunit biogenesis	7.14E-04
33	GO:0010600: regulation of auxin biosynthetic process	7.14E-04
34	GO:0010252: auxin homeostasis	8.75E-04
35	GO:0006097: glyoxylate cycle	9.02E-04
36	GO:0010225: response to UV-C	9.02E-04
37	GO:0002238: response to molecule of fungal origin	1.10E-03
38	GO:0006561: proline biosynthetic process	1.10E-03
39	GO:0010315: auxin efflux	1.10E-03
40	GO:1900425: negative regulation of defense response to bacterium	1.10E-03
41	GO:0009617: response to bacterium	1.20E-03
42	GO:0006468: protein phosphorylation	1.24E-03
43	GO:0009817: defense response to fungus, incompatible interaction	1.33E-03
44	GO:1900056: negative regulation of leaf senescence	1.54E-03
45	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.54E-03
46	GO:0006099: tricarboxylic acid cycle	1.75E-03
47	GO:0006102: isocitrate metabolic process	1.78E-03
48	GO:0006605: protein targeting	1.78E-03
49	GO:0006952: defense response	1.87E-03
50	GO:0009808: lignin metabolic process	2.03E-03
51	GO:0007338: single fertilization	2.29E-03
52	GO:0006098: pentose-phosphate shunt	2.29E-03
53	GO:0090333: regulation of stomatal closure	2.29E-03
54	GO:0008202: steroid metabolic process	2.56E-03
55	GO:0009688: abscisic acid biosynthetic process	2.85E-03
56	GO:0006535: cysteine biosynthetic process from serine	2.85E-03
57	GO:0009809: lignin biosynthetic process	2.89E-03
58	GO:0006869: lipid transport	3.07E-03
59	GO:0030148: sphingolipid biosynthetic process	3.14E-03
60	GO:0009682: induced systemic resistance	3.14E-03
61	GO:0012501: programmed cell death	3.44E-03
62	GO:0055046: microgametogenesis	3.76E-03
63	GO:0009718: anthocyanin-containing compound biosynthetic process	3.76E-03
64	GO:0010540: basipetal auxin transport	4.08E-03
65	GO:0006541: glutamine metabolic process	4.08E-03
66	GO:0009225: nucleotide-sugar metabolic process	4.41E-03
67	GO:0005985: sucrose metabolic process	4.41E-03
68	GO:0034976: response to endoplasmic reticulum stress	4.75E-03
69	GO:2000377: regulation of reactive oxygen species metabolic process	5.10E-03
70	GO:0005992: trehalose biosynthetic process	5.10E-03
71	GO:0019344: cysteine biosynthetic process	5.10E-03
72	GO:0009845: seed germination	5.54E-03
73	GO:0016998: cell wall macromolecule catabolic process	5.83E-03
74	GO:0071456: cellular response to hypoxia	6.20E-03
75	GO:0010584: pollen exine formation	6.98E-03
76	GO:0009561: megagametogenesis	6.98E-03
77	GO:0007166: cell surface receptor signaling pathway	8.07E-03
78	GO:0010154: fruit development	8.21E-03
79	GO:0006885: regulation of pH	8.21E-03
80	GO:0010183: pollen tube guidance	9.06E-03
81	GO:0071554: cell wall organization or biogenesis	9.51E-03
82	GO:0002229: defense response to oomycetes	9.51E-03
83	GO:0009630: gravitropism	9.96E-03
84	GO:0006914: autophagy	1.09E-02
85	GO:0009567: double fertilization forming a zygote and endosperm	1.09E-02
86	GO:0051607: defense response to virus	1.18E-02
87	GO:0001666: response to hypoxia	1.23E-02
88	GO:0010029: regulation of seed germination	1.28E-02
89	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.40E-02
90	GO:0046777: protein autophosphorylation	1.45E-02
91	GO:0008219: cell death	1.49E-02
92	GO:0048767: root hair elongation	1.54E-02
93	GO:0010311: lateral root formation	1.54E-02
94	GO:0009407: toxin catabolic process	1.59E-02
95	GO:0010043: response to zinc ion	1.65E-02
96	GO:0042742: defense response to bacterium	1.80E-02
97	GO:0006979: response to oxidative stress	1.82E-02
98	GO:0032259: methylation	1.92E-02
99	GO:0009751: response to salicylic acid	1.98E-02
100	GO:0009733: response to auxin	2.09E-02
101	GO:0009926: auxin polar transport	2.10E-02
102	GO:0008283: cell proliferation	2.10E-02
103	GO:0009636: response to toxic substance	2.29E-02
104	GO:0009846: pollen germination	2.47E-02
105	GO:0042538: hyperosmotic salinity response	2.47E-02
106	GO:0006812: cation transport	2.47E-02
107	GO:0006364: rRNA processing	2.60E-02
108	GO:0006813: potassium ion transport	2.60E-02
109	GO:0010224: response to UV-B	2.67E-02
110	GO:0006096: glycolytic process	2.93E-02
111	GO:0048367: shoot system development	3.00E-02
112	GO:0005975: carbohydrate metabolic process	3.04E-02
113	GO:0009620: response to fungus	3.14E-02

Rank	GO Term	Adjusted P value
1	GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity	0.00E+00
2	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
3	GO:0010279: indole-3-acetic acid amido synthetase activity	8.22E-06
4	GO:0004674: protein serine/threonine kinase activity	1.92E-05
5	GO:0004012: phospholipid-translocating ATPase activity	2.96E-05
6	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	9.50E-05
7	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	9.50E-05
8	GO:0004425: indole-3-glycerol-phosphate synthase activity	9.50E-05
9	GO:0003867: 4-aminobutyrate transaminase activity	9.50E-05
10	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.27E-04
11	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.88E-04
12	GO:0050291: sphingosine N-acyltransferase activity	2.24E-04
13	GO:0003994: aconitate hydratase activity	2.24E-04
14	GO:0032934: sterol binding	2.24E-04
15	GO:0045140: inositol phosphoceramide synthase activity	2.24E-04
16	GO:0004383: guanylate cyclase activity	3.73E-04
17	GO:0016805: dipeptidase activity	3.73E-04
18	GO:0004049: anthranilate synthase activity	3.73E-04
19	GO:0005047: signal recognition particle binding	3.73E-04
20	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	5.37E-04
21	GO:0010328: auxin influx transmembrane transporter activity	7.14E-04
22	GO:0004031: aldehyde oxidase activity	7.14E-04
23	GO:0050302: indole-3-acetaldehyde oxidase activity	7.14E-04
24	GO:0050378: UDP-glucuronate 4-epimerase activity	7.14E-04
25	GO:0005524: ATP binding	7.89E-04
26	GO:0004124: cysteine synthase activity	1.31E-03
27	GO:0008235: metalloexopeptidase activity	1.54E-03
28	GO:0000287: magnesium ion binding	1.62E-03
29	GO:0050660: flavin adenine dinucleotide binding	1.99E-03
30	GO:0008142: oxysterol binding	2.03E-03
31	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.29E-03
32	GO:0030955: potassium ion binding	2.56E-03
33	GO:0004743: pyruvate kinase activity	2.56E-03
34	GO:0008171: O-methyltransferase activity	2.85E-03
35	GO:0004713: protein tyrosine kinase activity	2.85E-03
36	GO:0016301: kinase activity	2.91E-03
37	GO:0004177: aminopeptidase activity	3.14E-03
38	GO:0008559: xenobiotic-transporting ATPase activity	3.14E-03
39	GO:0019888: protein phosphatase regulator activity	3.76E-03
40	GO:0010329: auxin efflux transmembrane transporter activity	3.76E-03
41	GO:0004022: alcohol dehydrogenase (NAD) activity	3.76E-03
42	GO:0009055: electron carrier activity	3.89E-03
43	GO:0004725: protein tyrosine phosphatase activity	4.75E-03
44	GO:0043130: ubiquitin binding	5.10E-03
45	GO:0030170: pyridoxal phosphate binding	5.68E-03
46	GO:0003727: single-stranded RNA binding	6.98E-03
47	GO:0003756: protein disulfide isomerase activity	6.98E-03
48	GO:0005451: monovalent cation:proton antiporter activity	7.79E-03
49	GO:0003713: transcription coactivator activity	8.21E-03
50	GO:0016853: isomerase activity	8.63E-03
51	GO:0015299: solute:proton antiporter activity	8.63E-03
52	GO:0050662: coenzyme binding	8.63E-03
53	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	8.97E-03
54	GO:0015385: sodium:proton antiporter activity	1.04E-02
55	GO:0030246: carbohydrate binding	1.07E-02
56	GO:0016413: O-acetyltransferase activity	1.18E-02
57	GO:0030247: polysaccharide binding	1.38E-02
58	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.43E-02
59	GO:0030145: manganese ion binding	1.65E-02
60	GO:0050897: cobalt ion binding	1.65E-02
61	GO:0051539: 4 iron, 4 sulfur cluster binding	1.93E-02
62	GO:0003924: GTPase activity	2.01E-02
63	GO:0004364: glutathione transferase activity	2.05E-02
64	GO:0051537: 2 iron, 2 sulfur cluster binding	2.23E-02
65	GO:0015171: amino acid transmembrane transporter activity	2.80E-02
66	GO:0016887: ATPase activity	3.11E-02
67	GO:0004650: polygalacturonase activity	3.14E-02
68	GO:0015035: protein disulfide oxidoreductase activity	3.42E-02
69	GO:0016746: transferase activity, transferring acyl groups	3.42E-02
70	GO:0016829: lyase activity	4.15E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0016021: integral component of membrane	6.55E-05
3	GO:0045252: oxoglutarate dehydrogenase complex	9.50E-05
4	GO:0005886: plasma membrane	1.32E-04
5	GO:0005950: anthranilate synthase complex	2.24E-04
6	GO:0005783: endoplasmic reticulum	2.92E-04
7	GO:0005829: cytosol	1.20E-03
8	GO:0030687: preribosome, large subunit precursor	1.54E-03
9	GO:0034399: nuclear periphery	1.78E-03
10	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.03E-03
11	GO:0016602: CCAAT-binding factor complex	3.76E-03
12	GO:0005770: late endosome	8.21E-03
13	GO:0005774: vacuolar membrane	8.27E-03
14	GO:0005794: Golgi apparatus	9.06E-03
15	GO:0032580: Golgi cisterna membrane	1.09E-02
16	GO:0005788: endoplasmic reticulum lumen	1.28E-02
17	GO:0005802: trans-Golgi network	1.34E-02
18	GO:0031902: late endosome membrane	1.99E-02
19	GO:0005789: endoplasmic reticulum membrane	3.07E-02