Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G12120

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900367: positive regulation of defense response to insect0.00E+00
2GO:0002764: immune response-regulating signaling pathway0.00E+00
3GO:0006983: ER overload response0.00E+00
4GO:0010324: membrane invagination0.00E+00
5GO:0071327: cellular response to trehalose stimulus0.00E+00
6GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
7GO:0010647: positive regulation of cell communication0.00E+00
8GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
9GO:0060548: negative regulation of cell death5.02E-07
10GO:0019725: cellular homeostasis4.63E-06
11GO:0009626: plant-type hypersensitive response6.98E-06
12GO:0035556: intracellular signal transduction1.81E-05
13GO:0006468: protein phosphorylation1.88E-05
14GO:0015696: ammonium transport3.65E-05
15GO:0072488: ammonium transmembrane transport6.53E-05
16GO:0009617: response to bacterium6.98E-05
17GO:0034052: positive regulation of plant-type hypersensitive response1.03E-04
18GO:0010225: response to UV-C1.03E-04
19GO:0031348: negative regulation of defense response1.89E-04
20GO:0010200: response to chitin2.32E-04
21GO:0046777: protein autophosphorylation2.50E-04
22GO:0009609: response to symbiotic bacterium3.19E-04
23GO:0010421: hydrogen peroxide-mediated programmed cell death3.19E-04
24GO:0010482: regulation of epidermal cell division3.19E-04
25GO:0006643: membrane lipid metabolic process3.19E-04
26GO:1901183: positive regulation of camalexin biosynthetic process3.19E-04
27GO:0009270: response to humidity3.19E-04
28GO:0032469: endoplasmic reticulum calcium ion homeostasis3.19E-04
29GO:1902065: response to L-glutamate3.19E-04
30GO:0019567: arabinose biosynthetic process3.19E-04
31GO:0015969: guanosine tetraphosphate metabolic process3.19E-04
32GO:1900150: regulation of defense response to fungus3.32E-04
33GO:0010112: regulation of systemic acquired resistance4.90E-04
34GO:0044419: interspecies interaction between organisms6.97E-04
35GO:0031349: positive regulation of defense response6.97E-04
36GO:0043066: negative regulation of apoptotic process6.97E-04
37GO:0051258: protein polymerization6.97E-04
38GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine6.97E-04
39GO:0080151: positive regulation of salicylic acid mediated signaling pathway6.97E-04
40GO:0009838: abscission6.97E-04
41GO:0010618: aerenchyma formation6.97E-04
42GO:0080181: lateral root branching6.97E-04
43GO:0001666: response to hypoxia7.02E-04
44GO:0018105: peptidyl-serine phosphorylation7.67E-04
45GO:0015031: protein transport1.07E-03
46GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.13E-03
47GO:0007034: vacuolar transport1.13E-03
48GO:0016045: detection of bacterium1.13E-03
49GO:1900140: regulation of seedling development1.13E-03
50GO:0010359: regulation of anion channel activity1.13E-03
51GO:0045793: positive regulation of cell size1.13E-03
52GO:0010186: positive regulation of cellular defense response1.13E-03
53GO:0016192: vesicle-mediated transport1.13E-03
54GO:0009266: response to temperature stimulus1.13E-03
55GO:0015695: organic cation transport1.13E-03
56GO:0007165: signal transduction1.22E-03
57GO:0006886: intracellular protein transport1.49E-03
58GO:0015749: monosaccharide transport1.62E-03
59GO:0030100: regulation of endocytosis1.62E-03
60GO:0072583: clathrin-dependent endocytosis1.62E-03
61GO:0043207: response to external biotic stimulus1.62E-03
62GO:0072334: UDP-galactose transmembrane transport1.62E-03
63GO:0010150: leaf senescence1.67E-03
64GO:0006979: response to oxidative stress1.99E-03
65GO:0007166: cell surface receptor signaling pathway2.05E-03
66GO:0071456: cellular response to hypoxia2.06E-03
67GO:0051567: histone H3-K9 methylation2.18E-03
68GO:0080142: regulation of salicylic acid biosynthetic process2.18E-03
69GO:0045227: capsule polysaccharide biosynthetic process2.18E-03
70GO:0010483: pollen tube reception2.18E-03
71GO:0033358: UDP-L-arabinose biosynthetic process2.18E-03
72GO:0022622: root system development2.18E-03
73GO:0045927: positive regulation of growth2.78E-03
74GO:0006574: valine catabolic process3.43E-03
75GO:0006014: D-ribose metabolic process3.43E-03
76GO:0010942: positive regulation of cell death3.43E-03
77GO:0009749: response to glucose3.56E-03
78GO:0009094: L-phenylalanine biosynthetic process4.13E-03
79GO:0045926: negative regulation of growth4.13E-03
80GO:0031930: mitochondria-nucleus signaling pathway4.13E-03
81GO:0048509: regulation of meristem development4.13E-03
82GO:0010555: response to mannitol4.13E-03
83GO:0010310: regulation of hydrogen peroxide metabolic process4.13E-03
84GO:2000067: regulation of root morphogenesis4.13E-03
85GO:0009742: brassinosteroid mediated signaling pathway4.47E-03
86GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.76E-03
87GO:0010044: response to aluminum ion4.87E-03
88GO:0009610: response to symbiotic fungus4.87E-03
89GO:0046470: phosphatidylcholine metabolic process4.87E-03
90GO:0043090: amino acid import4.87E-03
91GO:0035265: organ growth5.66E-03
92GO:0009787: regulation of abscisic acid-activated signaling pathway5.66E-03
93GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.66E-03
94GO:0009819: drought recovery5.66E-03
95GO:0009816: defense response to bacterium, incompatible interaction5.82E-03
96GO:0007186: G-protein coupled receptor signaling pathway6.49E-03
97GO:0010497: plasmodesmata-mediated intercellular transport6.49E-03
98GO:0010204: defense response signaling pathway, resistance gene-independent6.49E-03
99GO:2000031: regulation of salicylic acid mediated signaling pathway6.49E-03
100GO:0016049: cell growth6.83E-03
101GO:0008219: cell death7.19E-03
102GO:0006098: pentose-phosphate shunt7.36E-03
103GO:0080144: amino acid homeostasis7.36E-03
104GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.27E-03
105GO:0010449: root meristem growth8.27E-03
106GO:0008202: steroid metabolic process8.27E-03
107GO:1900426: positive regulation of defense response to bacterium8.27E-03
108GO:0043069: negative regulation of programmed cell death9.22E-03
109GO:0006470: protein dephosphorylation9.89E-03
110GO:0009737: response to abscisic acid1.01E-02
111GO:0019684: photosynthesis, light reaction1.02E-02
112GO:0043085: positive regulation of catalytic activity1.02E-02
113GO:0009750: response to fructose1.02E-02
114GO:0048765: root hair cell differentiation1.02E-02
115GO:0000038: very long-chain fatty acid metabolic process1.02E-02
116GO:0006897: endocytosis1.09E-02
117GO:0002213: defense response to insect1.12E-02
118GO:0010105: negative regulation of ethylene-activated signaling pathway1.12E-02
119GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.12E-02
120GO:0012501: programmed cell death1.12E-02
121GO:0051707: response to other organism1.18E-02
122GO:0000209: protein polyubiquitination1.23E-02
123GO:0006006: glucose metabolic process1.23E-02
124GO:0018107: peptidyl-threonine phosphorylation1.23E-02
125GO:0055046: microgametogenesis1.23E-02
126GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.43E-02
127GO:0007030: Golgi organization1.45E-02
128GO:0010167: response to nitrate1.45E-02
129GO:0046688: response to copper ion1.45E-02
130GO:0070588: calcium ion transmembrane transport1.45E-02
131GO:0010053: root epidermal cell differentiation1.45E-02
132GO:0009225: nucleotide-sugar metabolic process1.45E-02
133GO:0009809: lignin biosynthetic process1.59E-02
134GO:0009863: salicylic acid mediated signaling pathway1.69E-02
135GO:0080147: root hair cell development1.69E-02
136GO:2000377: regulation of reactive oxygen species metabolic process1.69E-02
137GO:0010026: trichome differentiation1.81E-02
138GO:0006825: copper ion transport1.81E-02
139GO:0051302: regulation of cell division1.81E-02
140GO:0042742: defense response to bacterium1.90E-02
141GO:0080167: response to karrikin1.91E-02
142GO:0048278: vesicle docking1.94E-02
143GO:0010431: seed maturation1.94E-02
144GO:2000022: regulation of jasmonic acid mediated signaling pathway2.07E-02
145GO:0009620: response to fungus2.07E-02
146GO:0009625: response to insect2.20E-02
147GO:0006012: galactose metabolic process2.20E-02
148GO:0009306: protein secretion2.33E-02
149GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.47E-02
150GO:0080022: primary root development2.61E-02
151GO:0006662: glycerol ether metabolic process2.75E-02
152GO:0046323: glucose import2.75E-02
153GO:0009741: response to brassinosteroid2.75E-02
154GO:0061025: membrane fusion2.90E-02
155GO:0016042: lipid catabolic process3.00E-02
156GO:0019252: starch biosynthetic process3.05E-02
157GO:0008654: phospholipid biosynthetic process3.05E-02
158GO:0009751: response to salicylic acid3.06E-02
159GO:0009408: response to heat3.11E-02
160GO:0071554: cell wall organization or biogenesis3.20E-02
161GO:0002229: defense response to oomycetes3.20E-02
162GO:0007264: small GTPase mediated signal transduction3.35E-02
163GO:0006464: cellular protein modification process3.67E-02
164GO:0019760: glucosinolate metabolic process3.67E-02
165GO:0006904: vesicle docking involved in exocytosis3.83E-02
166GO:0009911: positive regulation of flower development4.16E-02
167GO:0010029: regulation of seed germination4.33E-02
168GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.38E-02
169GO:0006906: vesicle fusion4.50E-02
170GO:0009627: systemic acquired resistance4.50E-02
171GO:0048573: photoperiodism, flowering4.67E-02
172GO:0006950: response to stress4.67E-02
RankGO TermAdjusted P value
1GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
2GO:0004168: dolichol kinase activity0.00E+00
3GO:0008320: protein transmembrane transporter activity5.72E-08
4GO:0004672: protein kinase activity9.15E-07
5GO:0016301: kinase activity1.58E-05
6GO:0004674: protein serine/threonine kinase activity8.51E-05
7GO:0008519: ammonium transmembrane transporter activity1.48E-04
8GO:0033612: receptor serine/threonine kinase binding1.66E-04
9GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity3.19E-04
10GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity3.19E-04
11GO:2001147: camalexin binding3.19E-04
12GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.19E-04
13GO:0009679: hexose:proton symporter activity3.19E-04
14GO:0032050: clathrin heavy chain binding3.19E-04
15GO:2001227: quercitrin binding3.19E-04
16GO:0015085: calcium ion transmembrane transporter activity3.19E-04
17GO:0004714: transmembrane receptor protein tyrosine kinase activity3.32E-04
18GO:0004713: protein tyrosine kinase activity6.75E-04
19GO:0015036: disulfide oxidoreductase activity6.97E-04
20GO:0008728: GTP diphosphokinase activity6.97E-04
21GO:0009931: calcium-dependent protein serine/threonine kinase activity8.06E-04
22GO:0004683: calmodulin-dependent protein kinase activity8.61E-04
23GO:0031683: G-protein beta/gamma-subunit complex binding1.13E-03
24GO:0001664: G-protein coupled receptor binding1.13E-03
25GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.13E-03
26GO:0016531: copper chaperone activity1.13E-03
27GO:0005524: ATP binding1.24E-03
28GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.50E-03
29GO:0004871: signal transducer activity1.53E-03
30GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.62E-03
31GO:0019199: transmembrane receptor protein kinase activity2.18E-03
32GO:0050373: UDP-arabinose 4-epimerase activity2.18E-03
33GO:0047769: arogenate dehydratase activity2.18E-03
34GO:0004664: prephenate dehydratase activity2.18E-03
35GO:0005546: phosphatidylinositol-4,5-bisphosphate binding2.78E-03
36GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.78E-03
37GO:0005459: UDP-galactose transmembrane transporter activity2.78E-03
38GO:0015145: monosaccharide transmembrane transporter activity2.78E-03
39GO:0004605: phosphatidate cytidylyltransferase activity3.43E-03
40GO:0004709: MAP kinase kinase kinase activity3.43E-03
41GO:0004629: phospholipase C activity3.43E-03
42GO:0004747: ribokinase activity4.13E-03
43GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity4.13E-03
44GO:0003978: UDP-glucose 4-epimerase activity4.13E-03
45GO:0004435: phosphatidylinositol phospholipase C activity4.13E-03
46GO:0004656: procollagen-proline 4-dioxygenase activity4.13E-03
47GO:0019900: kinase binding4.13E-03
48GO:0005525: GTP binding4.14E-03
49GO:0043295: glutathione binding4.87E-03
50GO:0005509: calcium ion binding5.31E-03
51GO:0005544: calcium-dependent phospholipid binding5.66E-03
52GO:0008865: fructokinase activity5.66E-03
53GO:0008375: acetylglucosaminyltransferase activity6.15E-03
54GO:0004806: triglyceride lipase activity6.48E-03
55GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity6.49E-03
56GO:0008142: oxysterol binding6.49E-03
57GO:0004630: phospholipase D activity6.49E-03
58GO:0008171: O-methyltransferase activity9.22E-03
59GO:0008047: enzyme activator activity9.22E-03
60GO:0005543: phospholipid binding1.02E-02
61GO:0015198: oligopeptide transporter activity1.12E-02
62GO:0005516: calmodulin binding1.14E-02
63GO:0031072: heat shock protein binding1.23E-02
64GO:0005262: calcium channel activity1.23E-02
65GO:0005388: calcium-transporting ATPase activity1.23E-02
66GO:0005198: structural molecule activity1.33E-02
67GO:0051287: NAD binding1.43E-02
68GO:0031418: L-ascorbic acid binding1.69E-02
69GO:0003954: NADH dehydrogenase activity1.69E-02
70GO:0008234: cysteine-type peptidase activity1.76E-02
71GO:0004707: MAP kinase activity1.94E-02
72GO:0019706: protein-cysteine S-palmitoyltransferase activity1.94E-02
73GO:0047134: protein-disulfide reductase activity2.47E-02
74GO:0005515: protein binding2.49E-02
75GO:0004722: protein serine/threonine phosphatase activity2.69E-02
76GO:0004791: thioredoxin-disulfide reductase activity2.90E-02
77GO:0003924: GTPase activity3.11E-02
78GO:0004842: ubiquitin-protein transferase activity3.27E-02
79GO:0004197: cysteine-type endopeptidase activity3.35E-02
80GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.51E-02
81GO:0016597: amino acid binding3.99E-02
82GO:0016413: O-acetyltransferase activity3.99E-02
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Gene type



Gene DE type