co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G12120

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	0.00E+00
2	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
3	GO:0032491: detection of molecule of fungal origin	0.00E+00
4	GO:0032499: detection of peptidoglycan	0.00E+00
5	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
6	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
7	GO:0002764: immune response-regulating signaling pathway	0.00E+00
8	GO:0006468: protein phosphorylation	1.21E-04
9	GO:0031930: mitochondria-nucleus signaling pathway	1.81E-04
10	GO:0006562: proline catabolic process	2.97E-04
11	GO:0032469: endoplasmic reticulum calcium ion homeostasis	2.97E-04
12	GO:0034975: protein folding in endoplasmic reticulum	2.97E-04
13	GO:0015969: guanosine tetraphosphate metabolic process	2.97E-04
14	GO:0045010: actin nucleation	2.98E-04
15	GO:0010204: defense response signaling pathway, resistance gene-independent	3.66E-04
16	GO:0042742: defense response to bacterium	4.60E-04
17	GO:0009727: detection of ethylene stimulus	6.50E-04
18	GO:0045732: positive regulation of protein catabolic process	6.50E-04
19	GO:0043066: negative regulation of apoptotic process	6.50E-04
20	GO:0015865: purine nucleotide transport	6.50E-04
21	GO:0019725: cellular homeostasis	6.50E-04
22	GO:0010155: regulation of proton transport	6.50E-04
23	GO:0010133: proline catabolic process to glutamate	6.50E-04
24	GO:0080185: effector dependent induction by symbiont of host immune response	6.50E-04
25	GO:1902066: regulation of cell wall pectin metabolic process	6.50E-04
26	GO:0002240: response to molecule of oomycetes origin	6.50E-04
27	GO:0031349: positive regulation of defense response	6.50E-04
28	GO:0010200: response to chitin	9.07E-04
29	GO:2000028: regulation of photoperiodism, flowering	9.08E-04
30	GO:0046777: protein autophosphorylation	9.61E-04
31	GO:0007034: vacuolar transport	1.02E-03
32	GO:0009266: response to temperature stimulus	1.02E-03
33	GO:1901672: positive regulation of systemic acquired resistance	1.05E-03
34	GO:0048586: regulation of long-day photoperiodism, flowering	1.05E-03
35	GO:0032922: circadian regulation of gene expression	1.05E-03
36	GO:0034051: negative regulation of plant-type hypersensitive response	1.05E-03
37	GO:0016045: detection of bacterium	1.05E-03
38	GO:0010359: regulation of anion channel activity	1.05E-03
39	GO:0061158: 3'-UTR-mediated mRNA destabilization	1.05E-03
40	GO:0045836: positive regulation of meiotic nuclear division	1.05E-03
41	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	1.05E-03
42	GO:0010498: proteasomal protein catabolic process	1.05E-03
43	GO:0009863: salicylic acid mediated signaling pathway	1.40E-03
44	GO:0006537: glutamate biosynthetic process	1.51E-03
45	GO:0010731: protein glutathionylation	1.51E-03
46	GO:0071323: cellular response to chitin	1.51E-03
47	GO:0006986: response to unfolded protein	1.51E-03
48	GO:0046902: regulation of mitochondrial membrane permeability	1.51E-03
49	GO:0010104: regulation of ethylene-activated signaling pathway	1.51E-03
50	GO:0072583: clathrin-dependent endocytosis	1.51E-03
51	GO:0006470: protein dephosphorylation	1.74E-03
52	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.86E-03
53	GO:0031348: negative regulation of defense response	1.86E-03
54	GO:0071219: cellular response to molecule of bacterial origin	2.02E-03
55	GO:0060548: negative regulation of cell death	2.02E-03
56	GO:0045227: capsule polysaccharide biosynthetic process	2.02E-03
57	GO:0033358: UDP-L-arabinose biosynthetic process	2.02E-03
58	GO:0006486: protein glycosylation	2.31E-03
59	GO:0030041: actin filament polymerization	2.58E-03
60	GO:0009435: NAD biosynthetic process	2.58E-03
61	GO:0018344: protein geranylgeranylation	2.58E-03
62	GO:0009247: glycolipid biosynthetic process	2.58E-03
63	GO:0045927: positive regulation of growth	2.58E-03
64	GO:0033365: protein localization to organelle	3.19E-03
65	GO:0010337: regulation of salicylic acid metabolic process	3.19E-03
66	GO:0002238: response to molecule of fungal origin	3.19E-03
67	GO:0001731: formation of translation preinitiation complex	3.19E-03
68	GO:0048317: seed morphogenesis	3.19E-03
69	GO:0018105: peptidyl-serine phosphorylation	3.76E-03
70	GO:0009423: chorismate biosynthetic process	3.84E-03
71	GO:0045926: negative regulation of growth	3.84E-03
72	GO:0071470: cellular response to osmotic stress	3.84E-03
73	GO:0009738: abscisic acid-activated signaling pathway	4.37E-03
74	GO:0006904: vesicle docking involved in exocytosis	4.40E-03
75	GO:1900057: positive regulation of leaf senescence	4.53E-03
76	GO:0046470: phosphatidylcholine metabolic process	4.53E-03
77	GO:0035556: intracellular signal transduction	5.09E-03
78	GO:0030162: regulation of proteolysis	5.26E-03
79	GO:0006491: N-glycan processing	5.26E-03
80	GO:0019375: galactolipid biosynthetic process	5.26E-03
81	GO:0010928: regulation of auxin mediated signaling pathway	5.26E-03
82	GO:0009787: regulation of abscisic acid-activated signaling pathway	5.26E-03
83	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.26E-03
84	GO:0030968: endoplasmic reticulum unfolded protein response	6.03E-03
85	GO:0010208: pollen wall assembly	6.03E-03
86	GO:0009932: cell tip growth	6.03E-03
87	GO:0009817: defense response to fungus, incompatible interaction	6.45E-03
88	GO:0010112: regulation of systemic acquired resistance	6.83E-03
89	GO:0009408: response to heat	6.94E-03
90	GO:0006499: N-terminal protein myristoylation	7.11E-03
91	GO:1900426: positive regulation of defense response to bacterium	7.67E-03
92	GO:0048268: clathrin coat assembly	7.67E-03
93	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	7.67E-03
94	GO:0009737: response to abscisic acid	7.99E-03
95	GO:0009867: jasmonic acid mediated signaling pathway	8.18E-03
96	GO:0006032: chitin catabolic process	8.55E-03
97	GO:0009089: lysine biosynthetic process via diaminopimelate	9.46E-03
98	GO:0009073: aromatic amino acid family biosynthetic process	9.46E-03
99	GO:0006887: exocytosis	9.73E-03
100	GO:0006897: endocytosis	9.73E-03
101	GO:0000266: mitochondrial fission	1.04E-02
102	GO:0006952: defense response	1.11E-02
103	GO:0006626: protein targeting to mitochondrion	1.14E-02
104	GO:0018107: peptidyl-threonine phosphorylation	1.14E-02
105	GO:0055046: microgametogenesis	1.14E-02
106	GO:0006829: zinc II ion transport	1.14E-02
107	GO:0006855: drug transmembrane transport	1.23E-02
108	GO:0006446: regulation of translational initiation	1.24E-02
109	GO:0002237: response to molecule of bacterial origin	1.24E-02
110	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.28E-02
111	GO:0006812: cation transport	1.33E-02
112	GO:0046854: phosphatidylinositol phosphorylation	1.34E-02
113	GO:0009225: nucleotide-sugar metabolic process	1.34E-02
114	GO:0010167: response to nitrate	1.34E-02
115	GO:0034976: response to endoplasmic reticulum stress	1.45E-02
116	GO:0009414: response to water deprivation	1.51E-02
117	GO:0045333: cellular respiration	1.56E-02
118	GO:0080147: root hair cell development	1.56E-02
119	GO:0006487: protein N-linked glycosylation	1.56E-02
120	GO:0016192: vesicle-mediated transport	1.78E-02
121	GO:0051321: meiotic cell cycle	1.79E-02
122	GO:0016998: cell wall macromolecule catabolic process	1.79E-02
123	GO:0009620: response to fungus	1.86E-02
124	GO:0071456: cellular response to hypoxia	1.91E-02
125	GO:0071369: cellular response to ethylene stimulus	2.03E-02
126	GO:0006012: galactose metabolic process	2.03E-02
127	GO:0009561: megagametogenesis	2.16E-02
128	GO:0009306: protein secretion	2.16E-02
129	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.29E-02
130	GO:0055085: transmembrane transport	2.36E-02
131	GO:0006885: regulation of pH	2.55E-02
132	GO:0009960: endosperm development	2.55E-02
133	GO:0009751: response to salicylic acid	2.67E-02
134	GO:0048544: recognition of pollen	2.68E-02
135	GO:0009845: seed germination	2.76E-02
136	GO:0016310: phosphorylation	2.82E-02
137	GO:0009749: response to glucose	2.82E-02
138	GO:0048364: root development	2.87E-02
139	GO:0010193: response to ozone	2.96E-02
140	GO:0007264: small GTPase mediated signal transduction	3.10E-02
141	GO:0006464: cellular protein modification process	3.39E-02
142	GO:0051607: defense response to virus	3.70E-02
143	GO:0009615: response to virus	3.85E-02
144	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.93E-02
145	GO:0009816: defense response to bacterium, incompatible interaction	4.00E-02
146	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.00E-02
147	GO:0010029: regulation of seed germination	4.00E-02
148	GO:0009627: systemic acquired resistance	4.16E-02
149	GO:0009617: response to bacterium	4.19E-02

Rank	GO Term	Adjusted P value
1	GO:0005212: structural constituent of eye lens	0.00E+00
2	GO:2001080: chitosan binding	0.00E+00
3	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
4	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
5	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
6	GO:0008734: L-aspartate oxidase activity	0.00E+00
7	GO:0005522: profilin binding	0.00E+00
8	GO:0050220: prostaglandin-E synthase activity	0.00E+00
9	GO:0004107: chorismate synthase activity	0.00E+00
10	GO:0016301: kinase activity	1.93E-06
11	GO:0005509: calcium ion binding	1.68E-05
12	GO:0019199: transmembrane receptor protein kinase activity	5.77E-05
13	GO:0005524: ATP binding	8.01E-05
14	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	9.10E-05
15	GO:0004657: proline dehydrogenase activity	2.97E-04
16	GO:0046481: digalactosyldiacylglycerol synthase activity	2.97E-04
17	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.97E-04
18	GO:0032050: clathrin heavy chain binding	2.97E-04
19	GO:1901149: salicylic acid binding	2.97E-04
20	GO:0004662: CAAX-protein geranylgeranyltransferase activity	2.97E-04
21	GO:0004568: chitinase activity	6.09E-04
22	GO:0048531: beta-1,3-galactosyltransferase activity	6.50E-04
23	GO:0015036: disulfide oxidoreductase activity	6.50E-04
24	GO:0008728: GTP diphosphokinase activity	6.50E-04
25	GO:0004674: protein serine/threonine kinase activity	1.31E-03
26	GO:0035250: UDP-galactosyltransferase activity	1.51E-03
27	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	1.51E-03
28	GO:0009916: alternative oxidase activity	2.02E-03
29	GO:0050373: UDP-arabinose 4-epimerase activity	2.02E-03
30	GO:0004040: amidase activity	2.58E-03
31	GO:0005471: ATP:ADP antiporter activity	2.58E-03
32	GO:0008641: small protein activating enzyme activity	2.58E-03
33	GO:0005515: protein binding	3.05E-03
34	GO:0015035: protein disulfide oxidoreductase activity	3.76E-03
35	GO:0003978: UDP-glucose 4-epimerase activity	3.84E-03
36	GO:0003730: mRNA 3'-UTR binding	3.84E-03
37	GO:0004656: procollagen-proline 4-dioxygenase activity	3.84E-03
38	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.84E-03
39	GO:0004559: alpha-mannosidase activity	3.84E-03
40	GO:0008375: acetylglucosaminyltransferase activity	5.52E-03
41	GO:0009931: calcium-dependent protein serine/threonine kinase activity	5.52E-03
42	GO:0004722: protein serine/threonine phosphatase activity	5.81E-03
43	GO:0004683: calmodulin-dependent protein kinase activity	5.82E-03
44	GO:0004430: 1-phosphatidylinositol 4-kinase activity	6.03E-03
45	GO:0004630: phospholipase D activity	6.03E-03
46	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	6.03E-03
47	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.64E-03
48	GO:0015238: drug transmembrane transporter activity	6.78E-03
49	GO:0071949: FAD binding	6.83E-03
50	GO:0005545: 1-phosphatidylinositol binding	8.55E-03
51	GO:0004713: protein tyrosine kinase activity	8.55E-03
52	GO:0004712: protein serine/threonine/tyrosine kinase activity	8.94E-03
53	GO:0005543: phospholipid binding	9.46E-03
54	GO:0008559: xenobiotic-transporting ATPase activity	9.46E-03
55	GO:0046872: metal ion binding	9.52E-03
56	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	9.86E-03
57	GO:0008378: galactosyltransferase activity	1.04E-02
58	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.14E-02
59	GO:0031072: heat shock protein binding	1.14E-02
60	GO:0005262: calcium channel activity	1.14E-02
61	GO:0008061: chitin binding	1.34E-02
62	GO:0031418: L-ascorbic acid binding	1.56E-02
63	GO:0031625: ubiquitin protein ligase binding	1.58E-02
64	GO:0008324: cation transmembrane transporter activity	1.68E-02
65	GO:0051087: chaperone binding	1.68E-02
66	GO:0033612: receptor serine/threonine kinase binding	1.79E-02
67	GO:0003779: actin binding	1.98E-02
68	GO:0003756: protein disulfide isomerase activity	2.16E-02
69	GO:0005451: monovalent cation:proton antiporter activity	2.42E-02
70	GO:0046873: metal ion transmembrane transporter activity	2.55E-02
71	GO:0030276: clathrin binding	2.55E-02
72	GO:0015299: solute:proton antiporter activity	2.68E-02
73	GO:0010181: FMN binding	2.68E-02
74	GO:0004842: ubiquitin-protein transferase activity	2.73E-02
75	GO:0004672: protein kinase activity	3.02E-02
76	GO:0015385: sodium:proton antiporter activity	3.25E-02
77	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.25E-02
78	GO:0051015: actin filament binding	3.25E-02
79	GO:0015297: antiporter activity	3.36E-02
80	GO:0008483: transaminase activity	3.55E-02
81	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.48E-02
82	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.65E-02
83	GO:0044212: transcription regulatory region DNA binding	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0005911: cell-cell junction	2.97E-04
2	GO:0005953: CAAX-protein geranylgeranyltransferase complex	2.97E-04
3	GO:0005886: plasma membrane	3.47E-04
4	GO:0031314: extrinsic component of mitochondrial inner membrane	6.50E-04
5	GO:0030139: endocytic vesicle	1.05E-03
6	GO:0016282: eukaryotic 43S preinitiation complex	3.19E-03
7	GO:0000145: exocyst	3.65E-03
8	GO:0016021: integral component of membrane	3.70E-03
9	GO:0033290: eukaryotic 48S preinitiation complex	3.84E-03
10	GO:0000815: ESCRT III complex	3.84E-03
11	GO:0005654: nucleoplasm	4.66E-03
12	GO:0005743: mitochondrial inner membrane	6.22E-03
13	GO:0030125: clathrin vesicle coat	8.55E-03
14	GO:0005740: mitochondrial envelope	8.55E-03
15	GO:0048471: perinuclear region of cytoplasm	9.46E-03
16	GO:0031902: late endosome membrane	9.73E-03
17	GO:0005794: Golgi apparatus	1.27E-02
18	GO:0030176: integral component of endoplasmic reticulum membrane	1.34E-02
19	GO:0005795: Golgi stack	1.34E-02
20	GO:0005635: nuclear envelope	1.53E-02
21	GO:0070469: respiratory chain	1.68E-02
22	GO:0005741: mitochondrial outer membrane	1.79E-02
23	GO:0005905: clathrin-coated pit	1.79E-02
24	GO:0030136: clathrin-coated vesicle	2.29E-02
25	GO:0005770: late endosome	2.55E-02
26	GO:0000139: Golgi membrane	2.64E-02
27	GO:0009524: phragmoplast	2.69E-02
28	GO:0005789: endoplasmic reticulum membrane	3.22E-02
29	GO:0071944: cell periphery	3.25E-02
30	GO:0032580: Golgi cisterna membrane	3.39E-02
31	GO:0016020: membrane	3.56E-02
32	GO:0005783: endoplasmic reticulum	4.25E-02
33	GO:0019005: SCF ubiquitin ligase complex	4.65E-02
34	GO:0009707: chloroplast outer membrane	4.65E-02