Gene: AT4G03190
     


Gene description


TAIR ID: AT4G03190

Short description: GRR1-like protein 1

Pathogen responsiveness: -0.06

General responsiveness: 0.12

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


ubiquitin-dependent protein catabolic process, negative regulation of transcription by glucose, defense response, protein ubiquitination, pollen maturation, developmental growth, response to auxin, stamen development


GO cellular component


nuclear SCF ubiquitin ligase complex, nucleus


GO molecular function


protein binding, ubiquitin-protein transferase activity


Protein domain


SMARTSM00367, LRR_CC
SMARTSM00256, FBOX

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G23130, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 14 (Top20%)

click to view PPI network

Differentially expressed condition


19 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d1.696.58E-08
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.941.12E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.976.13E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.771.84E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV-1.531.20E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.669.75E-16
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.197.01E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.601.88E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.641.11E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.942.77E-16
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.784.99E-16
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.841.27E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.861.57E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-3.121.27E-12
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h-1.954.99E-09
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-1.654.69E-02
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.167.64E-05
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-2.211.49E-04
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.183.27E-03






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.