Gene: AT3G61550
     

Gene description


TAIR ID: AT3G61550

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -0.05

General responsiveness: 0.78

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


protein ubiquitination


GO cellular component


integral component of membrane, nucleus


GO molecular function


metal ion binding


Protein domain


PfamPF13639, Ring finger domain
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


22 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.784.15E-07
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-2.007.74E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.421.04E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.075.23E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.614.12E-10
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.924.92E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.659.42E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-2.193.29E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.881.19E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-2.163.86E-04
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV-1.648.01E-03
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.566.85E-10
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.761.45E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.453.25E-13
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.352.51E-03
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-2.258.40E-03
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.304.85E-04
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.292.60E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h-1.865.02E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.622.88E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h-1.711.20E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-2.086.95E-04






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