co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G61550

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090627: plant epidermal cell differentiation	0.00E+00
2	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	2.41E-05
3	GO:0010480: microsporocyte differentiation	2.41E-05
4	GO:1902448: positive regulation of shade avoidance	1.09E-04
5	GO:0090391: granum assembly	1.09E-04
6	GO:0010306: rhamnogalacturonan II biosynthetic process	1.62E-04
7	GO:0015979: photosynthesis	2.72E-04
8	GO:0010438: cellular response to sulfur starvation	2.84E-04
9	GO:0009913: epidermal cell differentiation	3.51E-04
10	GO:0010190: cytochrome b6f complex assembly	3.51E-04
11	GO:0009759: indole glucosinolate biosynthetic process	3.51E-04
12	GO:0048437: floral organ development	4.92E-04
13	GO:0010206: photosystem II repair	7.25E-04
14	GO:0010205: photoinhibition	8.07E-04
15	GO:0048229: gametophyte development	9.78E-04
16	GO:0002213: defense response to insect	1.07E-03
17	GO:0010075: regulation of meristem growth	1.16E-03
18	GO:0009934: regulation of meristem structural organization	1.25E-03
19	GO:0010030: positive regulation of seed germination	1.35E-03
20	GO:0000162: tryptophan biosynthetic process	1.45E-03
21	GO:0009833: plant-type primary cell wall biogenesis	1.45E-03
22	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.21E-03
23	GO:0048653: anther development	2.33E-03
24	GO:0042631: cellular response to water deprivation	2.33E-03
25	GO:0042335: cuticle development	2.33E-03
26	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.40E-03
27	GO:0048868: pollen tube development	2.45E-03
28	GO:0048825: cotyledon development	2.70E-03
29	GO:0000302: response to reactive oxygen species	2.82E-03
30	GO:0030244: cellulose biosynthetic process	4.34E-03
31	GO:0034599: cellular response to oxidative stress	5.26E-03
32	GO:0006855: drug transmembrane transport	6.76E-03
33	GO:0009624: response to nematode	9.56E-03
34	GO:0009742: brassinosteroid mediated signaling pathway	9.96E-03
35	GO:0009845: seed germination	1.18E-02
36	GO:0042744: hydrogen peroxide catabolic process	1.23E-02
37	GO:0030154: cell differentiation	1.33E-02
38	GO:0045490: pectin catabolic process	1.40E-02
39	GO:0009409: response to cold	1.65E-02
40	GO:0042254: ribosome biogenesis	1.94E-02
41	GO:0009860: pollen tube growth	2.02E-02
42	GO:0080167: response to karrikin	2.23E-02
43	GO:0045454: cell redox homeostasis	2.54E-02
44	GO:0016042: lipid catabolic process	2.89E-02
45	GO:0006629: lipid metabolic process	2.95E-02
46	GO:0009753: response to jasmonic acid	3.10E-02
47	GO:0008152: metabolic process	3.16E-02
48	GO:0006357: regulation of transcription from RNA polymerase II promoter	3.60E-02
49	GO:0006508: proteolysis	3.75E-02
50	GO:0045893: positive regulation of transcription, DNA-templated	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	2.41E-05
2	GO:0016846: carbon-sulfur lyase activity	2.84E-04
3	GO:0004130: cytochrome-c peroxidase activity	3.51E-04
4	GO:0047372: acylglycerol lipase activity	9.78E-04
5	GO:0031072: heat shock protein binding	1.16E-03
6	GO:0005528: FK506 binding	1.55E-03
7	GO:0033612: receptor serine/threonine kinase binding	1.76E-03
8	GO:0030570: pectate lyase activity	1.98E-03
9	GO:0016760: cellulose synthase (UDP-forming) activity	1.98E-03
10	GO:0003756: protein disulfide isomerase activity	2.10E-03
11	GO:0016759: cellulose synthase activity	3.22E-03
12	GO:0008236: serine-type peptidase activity	4.20E-03
13	GO:0030145: manganese ion binding	4.80E-03
14	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	6.76E-03
15	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	8.59E-03
16	GO:0051082: unfolded protein binding	9.56E-03
17	GO:0016829: lyase activity	1.18E-02
18	GO:0004252: serine-type endopeptidase activity	1.20E-02
19	GO:0046983: protein dimerization activity	1.63E-02
20	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.66E-02
21	GO:0004601: peroxidase activity	1.92E-02
22	GO:0016788: hydrolase activity, acting on ester bonds	1.94E-02
23	GO:0052689: carboxylic ester hydrolase activity	2.40E-02
24	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	2.54E-02
25	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	2.74E-02
26	GO:0008289: lipid binding	3.73E-02

Rank	GO Term	Adjusted P value
1	GO:0009534: chloroplast thylakoid	2.96E-07
2	GO:0009535: chloroplast thylakoid membrane	9.62E-07
3	GO:0009507: chloroplast	5.27E-05
4	GO:0009533: chloroplast stromal thylakoid	4.92E-04
5	GO:0009538: photosystem I reaction center	5.68E-04
6	GO:0009543: chloroplast thylakoid lumen	9.10E-04
7	GO:0030095: chloroplast photosystem II	1.25E-03
8	GO:0009522: photosystem I	2.57E-03
9	GO:0009523: photosystem II	2.70E-03
10	GO:0009295: nucleoid	3.35E-03
11	GO:0009570: chloroplast stroma	4.73E-03
12	GO:0031977: thylakoid lumen	5.75E-03
13	GO:0009579: thylakoid	7.19E-03