gene detail

Gene description

TAIR ID: AT3G57260

Short description: beta-1,3-glucanase 2

Pathogen responsiveness: 1.57

General responsiveness: 0.53

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G088951

Wheat:

TA.1174.1.S1_X_AT TA.225.1.S1_AT

GO biological process

systemic acquired resistance, carbohydrate metabolic process, response to cold

GO cellular component

vacuole, cell wall, apoplast, anchored component of plasma membrane, chloroplast, endoplasmic reticulum

GO molecular function

hydrolase activity, hydrolyzing O-glycosyl compounds, polysaccharide binding, cellulase activity, glucan exo-1,3-beta-glucosidase activity, glucan endo-1,3-beta-D-glucosidase activity

Protein domain

Pfam	PF00332, Glycosyl hydrolases family 17

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G16110, AT3G56400

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

36 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	2.94	3.13E-04
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 5 d	2.17	8.36E-04
GSE13739	Col, WT, control 7 d	Col, WT, G.orontii 7 d	3.76	1.29E-08
GSE13739	Col, eds, control 7 d	Col, eds, G.orontii 7 d	3.32	4.88E-07
GSE17464	Laer, control	Laer, PstDC3000 12 h	2.67	3.71E-03
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	3.17	3.94E-04
GSE17464	Penta, control	Penta, PstDC3000 12 h	2.88	1.26E-03
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	1.96	4.63E-02
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	2.04	3.30E-02
GSE18329	Col, wrky72_1, control	Col, wrky72_1, Hpa noco2 96 h	3.92	2.32E-17
GSE18329	Col, wrky72_1, control	Col, wrky72_2, Hpa noco2 96 h	4.18	1.55E-17
GSE20278	Col, RPL18-HF, control, polysomal RNA	Col, RPL18-HF, TuMV 10 d, polysomal RNA	2.75	6.03E-05
GSE20278	Col, RPL18-HF, control	Col, RPL18-HF, TuMV 10 d	2.85	2.97E-05
GSE26206	Col, WT, control	Col, WT, R.solani_AG8 7 d	2.56	3.39E-03
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	1.82	4.55E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	1.87	1.72E-03
GSE37921	Col, WT, control	Col, WT, CMV	3.30	4.47E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	2.20	7.07E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	2.20	6.54E-04
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	2.89	6.03E-05
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	2.09	2.72E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	5.43	3.36E-10
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	4.68	3.52E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	5.01	1.19E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	3.65	1.15E-07
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	4.54	4.42E-09
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	3.68	8.39E-06
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.29	1.35E-03
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	4.30	6.81E-07
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	2.13	2.90E-03
GSE5616	Col, WT, water 24 h	Col, WT, P. infestans 24 h	1.51	1.21E-03
GSE5685	Col, WT, control 24 h	Col, WT, Ps ES4326 24 h	1.54	4.29E-02
GSE5686	Col, WT, control 4 d	Col, WT, G.orontii 4 d	3.34	1.03E-04
GSE5686	Col, WT, control 5 d	Col, WT, G.orontii 5 d	4.28	5.25E-07
GSE6556	Col, WT, control	Col, WT, PstDC3000 AvrRpt2 48 h	3.92	2.11E-06
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	5.47	3.64E-08