co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G57260

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072722: response to amitrole	0.00E+00
2	GO:0071327: cellular response to trehalose stimulus	0.00E+00
3	GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway	0.00E+00
4	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
5	GO:0045792: negative regulation of cell size	0.00E+00
6	GO:1900367: positive regulation of defense response to insect	0.00E+00
7	GO:0002376: immune system process	0.00E+00
8	GO:0009617: response to bacterium	3.74E-13
9	GO:0042742: defense response to bacterium	6.44E-11
10	GO:0010200: response to chitin	1.67E-10
11	GO:0009751: response to salicylic acid	1.67E-08
12	GO:0009626: plant-type hypersensitive response	9.15E-08
13	GO:0080142: regulation of salicylic acid biosynthetic process	2.33E-07
14	GO:0006457: protein folding	8.81E-07
15	GO:0009816: defense response to bacterium, incompatible interaction	1.41E-06
16	GO:0034976: response to endoplasmic reticulum stress	1.51E-06
17	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.81E-06
18	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	2.65E-06
19	GO:0031349: positive regulation of defense response	2.65E-06
20	GO:0006952: defense response	4.06E-06
21	GO:0009625: response to insect	4.50E-06
22	GO:0010120: camalexin biosynthetic process	6.50E-06
23	GO:0030968: endoplasmic reticulum unfolded protein response	6.50E-06
24	GO:0048281: inflorescence morphogenesis	9.64E-06
25	GO:0010150: leaf senescence	1.42E-05
26	GO:0045454: cell redox homeostasis	1.55E-05
27	GO:0006468: protein phosphorylation	2.50E-05
28	GO:0009651: response to salt stress	3.53E-05
29	GO:0046686: response to cadmium ion	3.69E-05
30	GO:0009627: systemic acquired resistance	3.79E-05
31	GO:0002237: response to molecule of bacterial origin	3.98E-05
32	GO:0006979: response to oxidative stress	4.12E-05
33	GO:0009407: toxin catabolic process	6.19E-05
34	GO:0009697: salicylic acid biosynthetic process	6.36E-05
35	GO:0010942: positive regulation of cell death	9.33E-05
36	GO:0051707: response to other organism	1.28E-04
37	GO:0009636: response to toxic substance	1.57E-04
38	GO:0019276: UDP-N-acetylgalactosamine metabolic process	2.39E-04
39	GO:0034975: protein folding in endoplasmic reticulum	2.39E-04
40	GO:0006047: UDP-N-acetylglucosamine metabolic process	2.39E-04
41	GO:0009609: response to symbiotic bacterium	2.39E-04
42	GO:0009700: indole phytoalexin biosynthetic process	2.39E-04
43	GO:1901183: positive regulation of camalexin biosynthetic process	2.39E-04
44	GO:0080136: priming of cellular response to stress	2.39E-04
45	GO:0010230: alternative respiration	2.39E-04
46	GO:0050691: regulation of defense response to virus by host	2.39E-04
47	GO:0046244: salicylic acid catabolic process	2.39E-04
48	GO:0060862: negative regulation of floral organ abscission	2.39E-04
49	GO:0000302: response to reactive oxygen species	2.51E-04
50	GO:0010193: response to ozone	2.51E-04
51	GO:0010112: regulation of systemic acquired resistance	3.23E-04
52	GO:0009553: embryo sac development	3.64E-04
53	GO:0009409: response to cold	4.40E-04
54	GO:0006032: chitin catabolic process	4.48E-04
55	GO:2000072: regulation of defense response to fungus, incompatible interaction	5.29E-04
56	GO:0010618: aerenchyma formation	5.29E-04
57	GO:0010541: acropetal auxin transport	5.29E-04
58	GO:0008535: respiratory chain complex IV assembly	5.29E-04
59	GO:0002221: pattern recognition receptor signaling pathway	5.29E-04
60	GO:0009414: response to water deprivation	7.29E-04
61	GO:0045087: innate immune response	7.79E-04
62	GO:0070588: calcium ion transmembrane transport	8.45E-04
63	GO:0006011: UDP-glucose metabolic process	8.60E-04
64	GO:0010272: response to silver ion	8.60E-04
65	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	8.60E-04
66	GO:0010581: regulation of starch biosynthetic process	8.60E-04
67	GO:1900140: regulation of seedling development	8.60E-04
68	GO:0055074: calcium ion homeostasis	8.60E-04
69	GO:0050832: defense response to fungus	1.00E-03
70	GO:0009863: salicylic acid mediated signaling pathway	1.04E-03
71	GO:0000187: activation of MAPK activity	1.23E-03
72	GO:0048194: Golgi vesicle budding	1.23E-03
73	GO:0033617: mitochondrial respiratory chain complex IV assembly	1.23E-03
74	GO:0002239: response to oomycetes	1.23E-03
75	GO:0043207: response to external biotic stimulus	1.23E-03
76	GO:0072334: UDP-galactose transmembrane transport	1.23E-03
77	GO:0001676: long-chain fatty acid metabolic process	1.23E-03
78	GO:0016998: cell wall macromolecule catabolic process	1.25E-03
79	GO:0031348: negative regulation of defense response	1.36E-03
80	GO:0071456: cellular response to hypoxia	1.36E-03
81	GO:0009814: defense response, incompatible interaction	1.36E-03
82	GO:0009306: protein secretion	1.61E-03
83	GO:0010224: response to UV-B	1.62E-03
84	GO:0080037: negative regulation of cytokinin-activated signaling pathway	1.64E-03
85	GO:0060548: negative regulation of cell death	1.64E-03
86	GO:0045088: regulation of innate immune response	1.64E-03
87	GO:2000038: regulation of stomatal complex development	1.64E-03
88	GO:0010508: positive regulation of autophagy	1.64E-03
89	GO:0010188: response to microbial phytotoxin	1.64E-03
90	GO:0010197: polar nucleus fusion	2.03E-03
91	GO:0031365: N-terminal protein amino acid modification	2.09E-03
92	GO:0010225: response to UV-C	2.09E-03
93	GO:0006465: signal peptide processing	2.09E-03
94	GO:2000762: regulation of phenylpropanoid metabolic process	2.09E-03
95	GO:0046283: anthocyanin-containing compound metabolic process	2.09E-03
96	GO:0006891: intra-Golgi vesicle-mediated transport	2.50E-03
97	GO:0060918: auxin transport	2.57E-03
98	GO:0009759: indole glucosinolate biosynthetic process	2.57E-03
99	GO:0009555: pollen development	2.65E-03
100	GO:2000037: regulation of stomatal complex patterning	3.09E-03
101	GO:0010310: regulation of hydrogen peroxide metabolic process	3.09E-03
102	GO:0006886: intracellular protein transport	3.26E-03
103	GO:0009615: response to virus	3.61E-03
104	GO:0009610: response to symbiotic fungus	3.64E-03
105	GO:0070370: cellular heat acclimation	3.64E-03
106	GO:0050829: defense response to Gram-negative bacterium	3.64E-03
107	GO:0031540: regulation of anthocyanin biosynthetic process	4.23E-03
108	GO:0006102: isocitrate metabolic process	4.23E-03
109	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.23E-03
110	GO:0030162: regulation of proteolysis	4.23E-03
111	GO:0006605: protein targeting	4.23E-03
112	GO:0008219: cell death	4.70E-03
113	GO:0043562: cellular response to nitrogen levels	4.84E-03
114	GO:2000031: regulation of salicylic acid mediated signaling pathway	4.84E-03
115	GO:0009699: phenylpropanoid biosynthetic process	4.84E-03
116	GO:0010204: defense response signaling pathway, resistance gene-independent	4.84E-03
117	GO:0048527: lateral root development	5.43E-03
118	GO:0015780: nucleotide-sugar transport	5.48E-03
119	GO:0007166: cell surface receptor signaling pathway	5.75E-03
120	GO:1900426: positive regulation of defense response to bacterium	6.15E-03
121	GO:0010205: photoinhibition	6.15E-03
122	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.15E-03
123	GO:0009870: defense response signaling pathway, resistance gene-dependent	6.85E-03
124	GO:0042542: response to hydrogen peroxide	7.38E-03
125	GO:0009682: induced systemic resistance	7.58E-03
126	GO:0052544: defense response by callose deposition in cell wall	7.58E-03
127	GO:0000272: polysaccharide catabolic process	7.58E-03
128	GO:0071365: cellular response to auxin stimulus	8.33E-03
129	GO:0006790: sulfur compound metabolic process	8.33E-03
130	GO:0012501: programmed cell death	8.33E-03
131	GO:0015706: nitrate transport	8.33E-03
132	GO:0002213: defense response to insect	8.33E-03
133	GO:0010105: negative regulation of ethylene-activated signaling pathway	8.33E-03
134	GO:0010229: inflorescence development	9.11E-03
135	GO:0010075: regulation of meristem growth	9.11E-03
136	GO:0006970: response to osmotic stress	9.29E-03
137	GO:0031347: regulation of defense response	9.31E-03
138	GO:0009887: animal organ morphogenesis	9.92E-03
139	GO:0009934: regulation of meristem structural organization	9.92E-03
140	GO:0034605: cellular response to heat	9.92E-03
141	GO:0007034: vacuolar transport	9.92E-03
142	GO:0009723: response to ethylene	1.02E-02
143	GO:0006486: protein glycosylation	1.04E-02
144	GO:0009611: response to wounding	1.06E-02
145	GO:0046854: phosphatidylinositol phosphorylation	1.07E-02
146	GO:0009969: xyloglucan biosynthetic process	1.07E-02
147	GO:0042343: indole glucosinolate metabolic process	1.07E-02
148	GO:0010167: response to nitrate	1.07E-02
149	GO:0080167: response to karrikin	1.11E-02
150	GO:0000162: tryptophan biosynthetic process	1.16E-02
151	GO:0009737: response to abscisic acid	1.18E-02
152	GO:0046777: protein autophosphorylation	1.21E-02
153	GO:0009620: response to fungus	1.35E-02
154	GO:0015031: protein transport	1.38E-02
155	GO:0098542: defense response to other organism	1.43E-02
156	GO:0019748: secondary metabolic process	1.53E-02
157	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.53E-02
158	GO:0030433: ubiquitin-dependent ERAD pathway	1.53E-02
159	GO:0009411: response to UV	1.62E-02
160	GO:0009408: response to heat	1.82E-02
161	GO:0010051: xylem and phloem pattern formation	1.93E-02
162	GO:0042631: cellular response to water deprivation	1.93E-02
163	GO:0042391: regulation of membrane potential	1.93E-02
164	GO:0009845: seed germination	2.01E-02
165	GO:0048868: pollen tube development	2.03E-02
166	GO:0006662: glycerol ether metabolic process	2.03E-02
167	GO:0009646: response to absence of light	2.14E-02
168	GO:0009790: embryo development	2.17E-02
169	GO:0006623: protein targeting to vacuole	2.25E-02
170	GO:0010183: pollen tube guidance	2.25E-02
171	GO:0002229: defense response to oomycetes	2.36E-02
172	GO:0009567: double fertilization forming a zygote and endosperm	2.71E-02
173	GO:0006464: cellular protein modification process	2.71E-02
174	GO:0006904: vesicle docking involved in exocytosis	2.83E-02
175	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.87E-02
176	GO:0051607: defense response to virus	2.95E-02
177	GO:0000910: cytokinesis	2.95E-02
178	GO:0001666: response to hypoxia	3.07E-02
179	GO:0007165: signal transduction	3.17E-02
180	GO:0042128: nitrate assimilation	3.32E-02
181	GO:0016311: dephosphorylation	3.58E-02
182	GO:0009817: defense response to fungus, incompatible interaction	3.71E-02
183	GO:0048481: plant ovule development	3.71E-02
184	GO:0009832: plant-type cell wall biogenesis	3.84E-02
185	GO:0007568: aging	4.11E-02
186	GO:0010119: regulation of stomatal movement	4.11E-02
187	GO:0009631: cold acclimation	4.11E-02
188	GO:0009867: jasmonic acid mediated signaling pathway	4.39E-02
189	GO:0006099: tricarboxylic acid cycle	4.53E-02
190	GO:0034599: cellular response to oxidative stress	4.53E-02
191	GO:0006631: fatty acid metabolic process	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
2	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
3	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
4	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	0.00E+00
5	GO:0003756: protein disulfide isomerase activity	5.43E-06
6	GO:0005524: ATP binding	1.35E-05
7	GO:0005460: UDP-glucose transmembrane transporter activity	2.19E-05
8	GO:0016301: kinase activity	3.61E-05
9	GO:0051082: unfolded protein binding	4.25E-05
10	GO:0004674: protein serine/threonine kinase activity	4.50E-05
11	GO:0005459: UDP-galactose transmembrane transporter activity	6.36E-05
12	GO:0047631: ADP-ribose diphosphatase activity	6.36E-05
13	GO:0000210: NAD+ diphosphatase activity	9.33E-05
14	GO:0004364: glutathione transferase activity	1.19E-04
15	GO:0043295: glutathione binding	1.69E-04
16	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.16E-04
17	GO:0031127: alpha-(1,2)-fucosyltransferase activity	2.39E-04
18	GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity	2.39E-04
19	GO:2001227: quercitrin binding	2.39E-04
20	GO:0080042: ADP-glucose pyrophosphohydrolase activity	2.39E-04
21	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	2.39E-04
22	GO:0004048: anthranilate phosphoribosyltransferase activity	2.39E-04
23	GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity	2.39E-04
24	GO:2001147: camalexin binding	2.39E-04
25	GO:0005516: calmodulin binding	3.94E-04
26	GO:0004568: chitinase activity	4.48E-04
27	GO:0080041: ADP-ribose pyrophosphohydrolase activity	5.29E-04
28	GO:0017110: nucleoside-diphosphatase activity	5.29E-04
29	GO:0005509: calcium ion binding	6.43E-04
30	GO:0005388: calcium-transporting ATPase activity	6.71E-04
31	GO:0050897: cobalt ion binding	6.94E-04
32	GO:0008565: protein transporter activity	7.13E-04
33	GO:0004190: aspartic-type endopeptidase activity	8.45E-04
34	GO:0000030: mannosyltransferase activity	8.60E-04
35	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	8.60E-04
36	GO:0004148: dihydrolipoyl dehydrogenase activity	8.60E-04
37	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	8.60E-04
38	GO:0035529: NADH pyrophosphatase activity	1.23E-03
39	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.23E-03
40	GO:0051287: NAD binding	1.35E-03
41	GO:0004672: protein kinase activity	1.78E-03
42	GO:0015035: protein disulfide oxidoreductase activity	2.51E-03
43	GO:0030976: thiamine pyrophosphate binding	2.57E-03
44	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.57E-03
45	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.85E-03
46	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.09E-03
47	GO:0102391: decanoate--CoA ligase activity	3.09E-03
48	GO:0004012: phospholipid-translocating ATPase activity	3.09E-03
49	GO:0004467: long-chain fatty acid-CoA ligase activity	3.64E-03
50	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	3.64E-03
51	GO:0008235: metalloexopeptidase activity	3.64E-03
52	GO:0008320: protein transmembrane transporter activity	3.64E-03
53	GO:0004564: beta-fructofuranosidase activity	4.23E-03
54	GO:0004708: MAP kinase kinase activity	4.23E-03
55	GO:0004683: calmodulin-dependent protein kinase activity	4.25E-03
56	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.44E-03
57	GO:0008417: fucosyltransferase activity	5.48E-03
58	GO:0015112: nitrate transmembrane transporter activity	6.15E-03
59	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	6.15E-03
60	GO:0004575: sucrose alpha-glucosidase activity	6.15E-03
61	GO:0004712: protein serine/threonine/tyrosine kinase activity	6.50E-03
62	GO:0004713: protein tyrosine kinase activity	6.85E-03
63	GO:0004177: aminopeptidase activity	7.58E-03
64	GO:0008559: xenobiotic-transporting ATPase activity	7.58E-03
65	GO:0015095: magnesium ion transmembrane transporter activity	9.11E-03
66	GO:0005262: calcium channel activity	9.11E-03
67	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.11E-03
68	GO:0008083: growth factor activity	9.92E-03
69	GO:0016298: lipase activity	1.07E-02
70	GO:0030552: cAMP binding	1.07E-02
71	GO:0004867: serine-type endopeptidase inhibitor activity	1.07E-02
72	GO:0030553: cGMP binding	1.07E-02
73	GO:0008061: chitin binding	1.07E-02
74	GO:0003712: transcription cofactor activity	1.07E-02
75	GO:0031625: ubiquitin protein ligase binding	1.15E-02
76	GO:0005216: ion channel activity	1.34E-02
77	GO:0004707: MAP kinase activity	1.43E-02
78	GO:0004298: threonine-type endopeptidase activity	1.43E-02
79	GO:0033612: receptor serine/threonine kinase binding	1.43E-02
80	GO:0004871: signal transducer activity	1.48E-02
81	GO:0016746: transferase activity, transferring acyl groups	1.52E-02
82	GO:0016779: nucleotidyltransferase activity	1.53E-02
83	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.54E-02
84	GO:0030246: carbohydrate binding	1.60E-02
85	GO:0005507: copper ion binding	1.74E-02
86	GO:0047134: protein-disulfide reductase activity	1.82E-02
87	GO:0005249: voltage-gated potassium channel activity	1.93E-02
88	GO:0030551: cyclic nucleotide binding	1.93E-02
89	GO:0004527: exonuclease activity	2.03E-02
90	GO:0004791: thioredoxin-disulfide reductase activity	2.14E-02
91	GO:0016853: isomerase activity	2.14E-02
92	GO:0043565: sequence-specific DNA binding	2.56E-02
93	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.83E-02
94	GO:0051213: dioxygenase activity	3.07E-02
95	GO:0042802: identical protein binding	3.26E-02
96	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.32E-02
97	GO:0004806: triglyceride lipase activity	3.45E-02
98	GO:0015238: drug transmembrane transporter activity	3.84E-02
99	GO:0000287: magnesium ion binding	3.89E-02
100	GO:0004222: metalloendopeptidase activity	3.97E-02
101	GO:0003746: translation elongation factor activity	4.39E-02
102	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.39E-02
103	GO:0000987: core promoter proximal region sequence-specific DNA binding	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0005783: endoplasmic reticulum	7.56E-12
2	GO:0005788: endoplasmic reticulum lumen	1.75E-11
3	GO:0005886: plasma membrane	2.42E-10
4	GO:0005774: vacuolar membrane	5.16E-04
5	GO:0005901: caveola	5.29E-04
6	GO:0030134: ER to Golgi transport vesicle	5.29E-04
7	GO:0031012: extracellular matrix	6.71E-04
8	GO:0005795: Golgi stack	8.45E-04
9	GO:0030176: integral component of endoplasmic reticulum membrane	8.45E-04
10	GO:0009898: cytoplasmic side of plasma membrane	1.64E-03
11	GO:0030660: Golgi-associated vesicle membrane	1.64E-03
12	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.64E-03
13	GO:0048046: apoplast	1.68E-03
14	GO:0005789: endoplasmic reticulum membrane	1.94E-03
15	GO:0000164: protein phosphatase type 1 complex	2.09E-03
16	GO:0016592: mediator complex	2.67E-03
17	GO:0030173: integral component of Golgi membrane	3.09E-03
18	GO:0005801: cis-Golgi network	3.09E-03
19	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	4.23E-03
20	GO:0005773: vacuole	4.44E-03
21	GO:0019005: SCF ubiquitin ligase complex	4.70E-03
22	GO:0031090: organelle membrane	5.48E-03
23	GO:0005618: cell wall	5.74E-03
24	GO:0030665: clathrin-coated vesicle membrane	6.15E-03
25	GO:0005887: integral component of plasma membrane	6.81E-03
26	GO:0005740: mitochondrial envelope	6.85E-03
27	GO:0017119: Golgi transport complex	6.85E-03
28	GO:0005765: lysosomal membrane	7.58E-03
29	GO:0005829: cytosol	8.71E-03
30	GO:0005750: mitochondrial respiratory chain complex III	9.92E-03
31	GO:0005769: early endosome	1.16E-02
32	GO:0005839: proteasome core complex	1.43E-02
33	GO:0005741: mitochondrial outer membrane	1.43E-02
34	GO:0016021: integral component of membrane	1.49E-02
35	GO:0043231: intracellular membrane-bounded organelle	2.06E-02
36	GO:0019898: extrinsic component of membrane	2.25E-02
37	GO:0005622: intracellular	2.42E-02
38	GO:0032580: Golgi cisterna membrane	2.71E-02
39	GO:0000151: ubiquitin ligase complex	3.71E-02
40	GO:0009505: plant-type cell wall	4.07E-02
41	GO:0000325: plant-type vacuole	4.11E-02
42	GO:0005794: Golgi apparatus	4.16E-02
43	GO:0009507: chloroplast	4.90E-02
44	GO:0031902: late endosome membrane	4.95E-02