Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G57260

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0030149: sphingolipid catabolic process0.00E+00
2GO:0006793: phosphorus metabolic process0.00E+00
3GO:0072722: response to amitrole0.00E+00
4GO:0071327: cellular response to trehalose stimulus0.00E+00
5GO:0070212: protein poly-ADP-ribosylation0.00E+00
6GO:0045792: negative regulation of cell size0.00E+00
7GO:1900367: positive regulation of defense response to insect0.00E+00
8GO:0042430: indole-containing compound metabolic process0.00E+00
9GO:0009626: plant-type hypersensitive response7.17E-11
10GO:0009617: response to bacterium1.53E-10
11GO:0010942: positive regulation of cell death8.62E-07
12GO:0009615: response to virus9.24E-07
13GO:0009627: systemic acquired resistance1.25E-06
14GO:0031349: positive regulation of defense response2.32E-06
15GO:0080151: positive regulation of salicylic acid mediated signaling pathway2.32E-06
16GO:0010618: aerenchyma formation2.32E-06
17GO:0006457: protein folding5.17E-06
18GO:0030163: protein catabolic process1.52E-05
19GO:0009408: response to heat2.15E-05
20GO:0046686: response to cadmium ion2.48E-05
21GO:0060548: negative regulation of cell death3.53E-05
22GO:0006952: defense response4.79E-05
23GO:0034976: response to endoplasmic reticulum stress4.88E-05
24GO:0006099: tricarboxylic acid cycle7.24E-05
25GO:0051707: response to other organism1.07E-04
26GO:0010310: regulation of hydrogen peroxide metabolic process1.15E-04
27GO:0042742: defense response to bacterium1.49E-04
28GO:1901183: positive regulation of camalexin biosynthetic process2.22E-04
29GO:0009270: response to humidity2.22E-04
30GO:0060862: negative regulation of floral organ abscission2.22E-04
31GO:1900424: regulation of defense response to bacterium2.22E-04
32GO:0080093: regulation of photorespiration2.22E-04
33GO:0048448: stamen morphogenesis2.22E-04
34GO:0031998: regulation of fatty acid beta-oxidation2.22E-04
35GO:0010450: inflorescence meristem growth2.22E-04
36GO:0009609: response to symbiotic bacterium2.22E-04
37GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway3.46E-04
38GO:0009651: response to salt stress3.47E-04
39GO:0001666: response to hypoxia3.60E-04
40GO:0009816: defense response to bacterium, incompatible interaction3.88E-04
41GO:0006032: chitin catabolic process4.05E-04
42GO:0010200: response to chitin4.31E-04
43GO:0000272: polysaccharide catabolic process4.69E-04
44GO:0019752: carboxylic acid metabolic process4.95E-04
45GO:0044419: interspecies interaction between organisms4.95E-04
46GO:0019725: cellular homeostasis4.95E-04
47GO:0051592: response to calcium ion4.95E-04
48GO:0006123: mitochondrial electron transport, cytochrome c to oxygen4.95E-04
49GO:0051262: protein tetramerization4.95E-04
50GO:0048833: specification of floral organ number4.95E-04
51GO:0006468: protein phosphorylation5.41E-04
52GO:0010581: regulation of starch biosynthetic process8.05E-04
53GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway8.05E-04
54GO:1900140: regulation of seedling development8.05E-04
55GO:0055074: calcium ion homeostasis8.05E-04
56GO:0045793: positive regulation of cell size8.05E-04
57GO:0010351: lithium ion transport8.05E-04
58GO:0010186: positive regulation of cellular defense response8.05E-04
59GO:0010272: response to silver ion8.05E-04
60GO:0048281: inflorescence morphogenesis8.05E-04
61GO:0006511: ubiquitin-dependent protein catabolic process9.94E-04
62GO:0016998: cell wall macromolecule catabolic process1.13E-03
63GO:0006882: cellular zinc ion homeostasis1.15E-03
64GO:0046836: glycolipid transport1.15E-03
65GO:0048194: Golgi vesicle budding1.15E-03
66GO:0043207: response to external biotic stimulus1.15E-03
67GO:0031348: negative regulation of defense response1.24E-03
68GO:0033356: UDP-L-arabinose metabolic process1.53E-03
69GO:0034440: lipid oxidation1.53E-03
70GO:0080142: regulation of salicylic acid biosynthetic process1.53E-03
71GO:0045727: positive regulation of translation1.53E-03
72GO:1902584: positive regulation of response to water deprivation1.53E-03
73GO:0046283: anthocyanin-containing compound metabolic process1.95E-03
74GO:0031365: N-terminal protein amino acid modification1.95E-03
75GO:0006097: glyoxylate cycle1.95E-03
76GO:0010225: response to UV-C1.95E-03
77GO:0045927: positive regulation of growth1.95E-03
78GO:0000304: response to singlet oxygen1.95E-03
79GO:0009697: salicylic acid biosynthetic process1.95E-03
80GO:0034052: positive regulation of plant-type hypersensitive response1.95E-03
81GO:0080167: response to karrikin2.03E-03
82GO:0009555: pollen development2.21E-03
83GO:0010193: response to ozone2.26E-03
84GO:0018258: protein O-linked glycosylation via hydroxyproline2.40E-03
85GO:0006121: mitochondrial electron transport, succinate to ubiquinone2.40E-03
86GO:0010405: arabinogalactan protein metabolic process2.40E-03
87GO:0006796: phosphate-containing compound metabolic process2.40E-03
88GO:0032502: developmental process2.42E-03
89GO:0034389: lipid particle organization2.89E-03
90GO:0010555: response to mannitol2.89E-03
91GO:0080086: stamen filament development2.89E-03
92GO:2000067: regulation of root morphogenesis2.89E-03
93GO:0015977: carbon fixation2.89E-03
94GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.89E-03
95GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c3.40E-03
96GO:0071669: plant-type cell wall organization or biogenesis3.40E-03
97GO:0030026: cellular manganese ion homeostasis3.40E-03
98GO:0009610: response to symbiotic fungus3.40E-03
99GO:0043090: amino acid import3.40E-03
100GO:1900056: negative regulation of leaf senescence3.40E-03
101GO:0080186: developmental vegetative growth3.40E-03
102GO:0009751: response to salicylic acid3.59E-03
103GO:0031540: regulation of anthocyanin biosynthetic process3.94E-03
104GO:0006102: isocitrate metabolic process3.94E-03
105GO:0009787: regulation of abscisic acid-activated signaling pathway3.94E-03
106GO:0009409: response to cold3.98E-03
107GO:0008219: cell death4.25E-03
108GO:0010150: leaf senescence4.26E-03
109GO:0010262: somatic embryogenesis4.51E-03
110GO:0010497: plasmodesmata-mediated intercellular transport4.51E-03
111GO:0010204: defense response signaling pathway, resistance gene-independent4.51E-03
112GO:2000031: regulation of salicylic acid mediated signaling pathway4.51E-03
113GO:0022900: electron transport chain4.51E-03
114GO:0009880: embryonic pattern specification4.51E-03
115GO:0007186: G-protein coupled receptor signaling pathway4.51E-03
116GO:0010112: regulation of systemic acquired resistance5.11E-03
117GO:0046685: response to arsenic-containing substance5.11E-03
118GO:0048354: mucilage biosynthetic process involved in seed coat development5.74E-03
119GO:1900426: positive regulation of defense response to bacterium5.74E-03
120GO:0010205: photoinhibition5.74E-03
121GO:2000280: regulation of root development5.74E-03
122GO:0009870: defense response signaling pathway, resistance gene-dependent6.38E-03
123GO:0055062: phosphate ion homeostasis6.38E-03
124GO:0009299: mRNA transcription6.38E-03
125GO:0007064: mitotic sister chromatid cohesion6.38E-03
126GO:0006508: proteolysis7.05E-03
127GO:0009073: aromatic amino acid family biosynthetic process7.06E-03
128GO:0009750: response to fructose7.06E-03
129GO:0016485: protein processing7.06E-03
130GO:0006816: calcium ion transport7.06E-03
131GO:0006979: response to oxidative stress7.71E-03
132GO:0015706: nitrate transport7.76E-03
133GO:0002213: defense response to insect7.76E-03
134GO:0010105: negative regulation of ethylene-activated signaling pathway7.76E-03
135GO:0006820: anion transport7.76E-03
136GO:0009965: leaf morphogenesis7.80E-03
137GO:0006108: malate metabolic process8.48E-03
138GO:0010075: regulation of meristem growth8.48E-03
139GO:0009611: response to wounding9.06E-03
140GO:0002237: response to molecule of bacterial origin9.23E-03
141GO:0009266: response to temperature stimulus9.23E-03
142GO:0009934: regulation of meristem structural organization9.23E-03
143GO:0006486: protein glycosylation9.36E-03
144GO:0009737: response to abscisic acid9.64E-03
145GO:0010224: response to UV-B9.69E-03
146GO:0010167: response to nitrate1.00E-02
147GO:0009901: anther dehiscence1.00E-02
148GO:0046688: response to copper ion1.00E-02
149GO:0070588: calcium ion transmembrane transport1.00E-02
150GO:0042343: indole glucosinolate metabolic process1.00E-02
151GO:0000162: tryptophan biosynthetic process1.08E-02
152GO:0000027: ribosomal large subunit assembly1.16E-02
153GO:0009863: salicylic acid mediated signaling pathway1.16E-02
154GO:0045454: cell redox homeostasis1.23E-02
155GO:0009695: jasmonic acid biosynthetic process1.24E-02
156GO:0006825: copper ion transport1.24E-02
157GO:0006874: cellular calcium ion homeostasis1.24E-02
158GO:0031408: oxylipin biosynthetic process1.33E-02
159GO:0098542: defense response to other organism1.33E-02
160GO:0009624: response to nematode1.34E-02
161GO:2000022: regulation of jasmonic acid mediated signaling pathway1.42E-02
162GO:0009411: response to UV1.51E-02
163GO:0040007: growth1.51E-02
164GO:0009625: response to insect1.51E-02
165GO:0009306: protein secretion1.60E-02
166GO:0010091: trichome branching1.60E-02
167GO:0042391: regulation of membrane potential1.79E-02
168GO:0048653: anther development1.79E-02
169GO:0009845: seed germination1.81E-02
170GO:0006520: cellular amino acid metabolic process1.89E-02
171GO:0006814: sodium ion transport1.99E-02
172GO:0009749: response to glucose2.09E-02
173GO:0010183: pollen tube guidance2.09E-02
174GO:0000302: response to reactive oxygen species2.19E-02
175GO:0006891: intra-Golgi vesicle-mediated transport2.19E-02
176GO:0040008: regulation of growth2.21E-02
177GO:0010286: heat acclimation2.63E-02
178GO:0007166: cell surface receptor signaling pathway2.65E-02
179GO:0051607: defense response to virus2.74E-02
180GO:0042128: nitrate assimilation3.09E-02
181GO:0030244: cellulose biosynthetic process3.45E-02
182GO:0009832: plant-type cell wall biogenesis3.57E-02
183GO:0006811: ion transport3.70E-02
184GO:0009407: toxin catabolic process3.70E-02
185GO:0010043: response to zinc ion3.82E-02
186GO:0048527: lateral root development3.82E-02
187GO:0006865: amino acid transport3.95E-02
188GO:0045087: innate immune response4.08E-02
189GO:0009853: photorespiration4.08E-02
190GO:0006839: mitochondrial transport4.47E-02
191GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.57E-02
192GO:0044550: secondary metabolite biosynthetic process4.80E-02
193GO:0009744: response to sucrose4.88E-02
194GO:0008283: cell proliferation4.88E-02
RankGO TermAdjusted P value
1GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
2GO:0004190: aspartic-type endopeptidase activity9.32E-07
3GO:0004298: threonine-type endopeptidase activity2.41E-06
4GO:0005524: ATP binding1.52E-05
5GO:0051082: unfolded protein binding3.36E-05
6GO:0047631: ADP-ribose diphosphatase activity5.65E-05
7GO:0000210: NAD+ diphosphatase activity8.30E-05
8GO:0016301: kinase activity1.90E-04
9GO:0004714: transmembrane receptor protein tyrosine kinase activity1.94E-04
10GO:0004048: anthranilate phosphoribosyltransferase activity2.22E-04
11GO:0080042: ADP-glucose pyrophosphohydrolase activity2.22E-04
12GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity2.22E-04
13GO:0004674: protein serine/threonine kinase activity3.63E-04
14GO:0004568: chitinase activity4.05E-04
15GO:0052691: UDP-arabinopyranose mutase activity4.95E-04
16GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity4.95E-04
17GO:0048531: beta-1,3-galactosyltransferase activity4.95E-04
18GO:0004634: phosphopyruvate hydratase activity4.95E-04
19GO:0080041: ADP-ribose pyrophosphohydrolase activity4.95E-04
20GO:0017110: nucleoside-diphosphatase activity4.95E-04
21GO:0005388: calcium-transporting ATPase activity6.09E-04
22GO:0008061: chitin binding7.67E-04
23GO:0004148: dihydrolipoyl dehydrogenase activity8.05E-04
24GO:0031683: G-protein beta/gamma-subunit complex binding8.05E-04
25GO:0008964: phosphoenolpyruvate carboxylase activity8.05E-04
26GO:0016165: linoleate 13S-lipoxygenase activity8.05E-04
27GO:0001664: G-protein coupled receptor binding8.05E-04
28GO:0016531: copper chaperone activity8.05E-04
29GO:0004108: citrate (Si)-synthase activity1.15E-03
30GO:0004449: isocitrate dehydrogenase (NAD+) activity1.15E-03
31GO:0017089: glycolipid transporter activity1.15E-03
32GO:0035529: NADH pyrophosphatase activity1.15E-03
33GO:0051287: NAD binding1.19E-03
34GO:0000287: magnesium ion binding1.42E-03
35GO:0003756: protein disulfide isomerase activity1.46E-03
36GO:0016866: intramolecular transferase activity1.53E-03
37GO:0015368: calcium:cation antiporter activity1.53E-03
38GO:0051861: glycolipid binding1.53E-03
39GO:0015369: calcium:proton antiporter activity1.53E-03
40GO:0000104: succinate dehydrogenase activity1.95E-03
41GO:0002020: protease binding1.95E-03
42GO:0008233: peptidase activity1.97E-03
43GO:0016462: pyrophosphatase activity2.40E-03
44GO:0016615: malate dehydrogenase activity2.40E-03
45GO:0030976: thiamine pyrophosphate binding2.40E-03
46GO:1990714: hydroxyproline O-galactosyltransferase activity2.40E-03
47GO:0004012: phospholipid-translocating ATPase activity2.89E-03
48GO:0030060: L-malate dehydrogenase activity2.89E-03
49GO:0016831: carboxy-lyase activity3.40E-03
50GO:0008235: metalloexopeptidase activity3.40E-03
51GO:0004427: inorganic diphosphatase activity3.40E-03
52GO:0004806: triglyceride lipase activity3.84E-03
53GO:0005544: calcium-dependent phospholipid binding3.94E-03
54GO:0015491: cation:cation antiporter activity3.94E-03
55GO:0015288: porin activity3.94E-03
56GO:0008308: voltage-gated anion channel activity4.51E-03
57GO:0005516: calmodulin binding4.53E-03
58GO:0004672: protein kinase activity4.67E-03
59GO:0050897: cobalt ion binding4.91E-03
60GO:0015112: nitrate transmembrane transporter activity5.74E-03
61GO:0004713: protein tyrosine kinase activity6.38E-03
62GO:0004177: aminopeptidase activity7.06E-03
63GO:0016887: ATPase activity7.13E-03
64GO:0008378: galactosyltransferase activity7.76E-03
65GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism8.48E-03
66GO:0031072: heat shock protein binding8.48E-03
67GO:0005262: calcium channel activity8.48E-03
68GO:0015114: phosphate ion transmembrane transporter activity8.48E-03
69GO:0016298: lipase activity9.69E-03
70GO:0003712: transcription cofactor activity1.00E-02
71GO:0030552: cAMP binding1.00E-02
72GO:0030553: cGMP binding1.00E-02
73GO:0004725: protein tyrosine phosphatase activity1.08E-02
74GO:0005216: ion channel activity1.24E-02
75GO:0004871: signal transducer activity1.30E-02
76GO:0033612: receptor serine/threonine kinase binding1.33E-02
77GO:0005507: copper ion binding1.49E-02
78GO:0016760: cellulose synthase (UDP-forming) activity1.51E-02
79GO:0046872: metal ion binding1.53E-02
80GO:0016758: transferase activity, transferring hexosyl groups1.63E-02
81GO:0005249: voltage-gated potassium channel activity1.79E-02
82GO:0030551: cyclic nucleotide binding1.79E-02
83GO:0008565: protein transporter activity2.01E-02
84GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.16E-02
85GO:0005509: calcium ion binding2.24E-02
86GO:0008237: metallopeptidase activity2.63E-02
87GO:0004721: phosphoprotein phosphatase activity3.20E-02
88GO:0005515: protein binding3.51E-02
89GO:0015238: drug transmembrane transporter activity3.57E-02
90GO:0004222: metalloendopeptidase activity3.70E-02
91GO:0030145: manganese ion binding3.82E-02
92GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.82E-02
93GO:0043531: ADP binding3.92E-02
94GO:0003746: translation elongation factor activity4.08E-02
95GO:0050660: flavin adenine dinucleotide binding4.13E-02
96GO:0000987: core promoter proximal region sequence-specific DNA binding4.21E-02
97GO:0004712: protein serine/threonine/tyrosine kinase activity4.34E-02
98GO:0030246: carbohydrate binding4.73E-02
99GO:0004364: glutathione transferase activity4.74E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane5.23E-09
2GO:0005774: vacuolar membrane1.66E-08
3GO:0005783: endoplasmic reticulum3.04E-07
4GO:0005839: proteasome core complex2.41E-06
5GO:0019773: proteasome core complex, alpha-subunit complex5.45E-06
6GO:0000502: proteasome complex1.45E-05
7GO:0005788: endoplasmic reticulum lumen2.78E-05
8GO:0048046: apoplast3.19E-05
9GO:0005741: mitochondrial outer membrane7.78E-05
10GO:0000138: Golgi trans cisterna2.22E-04
11GO:0031351: integral component of plastid membrane2.22E-04
12GO:0005740: mitochondrial envelope4.05E-04
13GO:0005773: vacuole4.59E-04
14GO:0000015: phosphopyruvate hydratase complex4.95E-04
15GO:0005618: cell wall5.64E-04
16GO:0005829: cytosol7.52E-04
17GO:0005795: Golgi stack7.67E-04
18GO:0005758: mitochondrial intermembrane space9.41E-04
19GO:0030660: Golgi-associated vesicle membrane1.53E-03
20GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.53E-03
21GO:0005747: mitochondrial respiratory chain complex I1.75E-03
22GO:0016021: integral component of membrane1.81E-03
23GO:0022626: cytosolic ribosome2.04E-03
24GO:0009506: plasmodesma2.88E-03
25GO:0016363: nuclear matrix2.89E-03
26GO:0005759: mitochondrial matrix3.78E-03
27GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)3.94E-03
28GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane3.94E-03
29GO:0005811: lipid particle4.51E-03
30GO:0046930: pore complex4.51E-03
31GO:0031090: organelle membrane5.11E-03
32GO:0008541: proteasome regulatory particle, lid subcomplex7.06E-03
33GO:0005765: lysosomal membrane7.06E-03
34GO:0009507: chloroplast7.37E-03
35GO:0031012: extracellular matrix8.48E-03
36GO:0045271: respiratory chain complex I1.24E-02
37GO:0070469: respiratory chain1.24E-02
38GO:0015935: small ribosomal subunit1.33E-02
39GO:0005794: Golgi apparatus1.56E-02
40GO:0031225: anchored component of membrane1.71E-02
41GO:0016020: membrane2.69E-02
42GO:0000151: ubiquitin ligase complex3.45E-02
43GO:0005819: spindle4.34E-02
44GO:0005789: endoplasmic reticulum membrane4.67E-02
45GO:0090406: pollen tube4.88E-02
Gene type



Gene DE type