Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G57260

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072722: response to amitrole0.00E+00
2GO:0010055: atrichoblast differentiation0.00E+00
3GO:0006654: phosphatidic acid biosynthetic process0.00E+00
4GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
5GO:0002084: protein depalmitoylation0.00E+00
6GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
7GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
8GO:0010793: regulation of mRNA export from nucleus0.00E+00
9GO:0034756: regulation of iron ion transport0.00E+00
10GO:0046865: terpenoid transport0.00E+00
11GO:0051707: response to other organism8.64E-06
12GO:0009814: defense response, incompatible interaction3.16E-05
13GO:0006517: protein deglycosylation3.47E-05
14GO:0006623: protein targeting to vacuole9.26E-05
15GO:0032107: regulation of response to nutrient levels4.81E-04
16GO:0031123: RNA 3'-end processing4.81E-04
17GO:0015760: glucose-6-phosphate transport4.81E-04
18GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.81E-04
19GO:0098789: pre-mRNA cleavage required for polyadenylation4.81E-04
20GO:0009700: indole phytoalexin biosynthetic process4.81E-04
21GO:0010230: alternative respiration4.81E-04
22GO:0042868: antisense RNA metabolic process4.81E-04
23GO:0071446: cellular response to salicylic acid stimulus4.86E-04
24GO:1900150: regulation of defense response to fungus6.06E-04
25GO:0015780: nucleotide-sugar transport8.84E-04
26GO:0015709: thiosulfate transport1.04E-03
27GO:0031204: posttranslational protein targeting to membrane, translocation1.04E-03
28GO:0071422: succinate transmembrane transport1.04E-03
29GO:0046939: nucleotide phosphorylation1.04E-03
30GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.04E-03
31GO:1902066: regulation of cell wall pectin metabolic process1.04E-03
32GO:0050684: regulation of mRNA processing1.04E-03
33GO:0090332: stomatal closure1.04E-03
34GO:0042853: L-alanine catabolic process1.04E-03
35GO:0048268: clathrin coat assembly1.04E-03
36GO:0019725: cellular homeostasis1.04E-03
37GO:0051252: regulation of RNA metabolic process1.04E-03
38GO:0015712: hexose phosphate transport1.04E-03
39GO:0006996: organelle organization1.04E-03
40GO:0009156: ribonucleoside monophosphate biosynthetic process1.04E-03
41GO:0051607: defense response to virus1.40E-03
42GO:0009615: response to virus1.50E-03
43GO:0045836: positive regulation of meiotic nuclear division1.69E-03
44GO:0010186: positive regulation of cellular defense response1.69E-03
45GO:0015783: GDP-fucose transport1.69E-03
46GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process1.69E-03
47GO:0010272: response to silver ion1.69E-03
48GO:0015692: lead ion transport1.69E-03
49GO:0060968: regulation of gene silencing1.69E-03
50GO:0015714: phosphoenolpyruvate transport1.69E-03
51GO:0080168: abscisic acid transport1.69E-03
52GO:0048586: regulation of long-day photoperiodism, flowering1.69E-03
53GO:0032922: circadian regulation of gene expression1.69E-03
54GO:0032784: regulation of DNA-templated transcription, elongation1.69E-03
55GO:0061158: 3'-UTR-mediated mRNA destabilization1.69E-03
56GO:0017006: protein-tetrapyrrole linkage1.69E-03
57GO:0035436: triose phosphate transmembrane transport1.69E-03
58GO:0010253: UDP-rhamnose biosynthetic process1.69E-03
59GO:1901672: positive regulation of systemic acquired resistance1.69E-03
60GO:0009627: systemic acquired resistance1.73E-03
61GO:0009225: nucleotide-sugar metabolic process2.30E-03
62GO:0032877: positive regulation of DNA endoreduplication2.45E-03
63GO:0055089: fatty acid homeostasis2.45E-03
64GO:0000187: activation of MAPK activity2.45E-03
65GO:0015729: oxaloacetate transport2.45E-03
66GO:0009584: detection of visible light2.45E-03
67GO:0072334: UDP-galactose transmembrane transport2.45E-03
68GO:0010731: protein glutathionylation2.45E-03
69GO:0010104: regulation of ethylene-activated signaling pathway2.45E-03
70GO:0046739: transport of virus in multicellular host2.45E-03
71GO:1902290: positive regulation of defense response to oomycetes2.45E-03
72GO:0006516: glycoprotein catabolic process2.45E-03
73GO:0006515: misfolded or incompletely synthesized protein catabolic process2.45E-03
74GO:0042742: defense response to bacterium2.66E-03
75GO:0009165: nucleotide biosynthetic process3.30E-03
76GO:0010109: regulation of photosynthesis3.30E-03
77GO:0060548: negative regulation of cell death3.30E-03
78GO:0033320: UDP-D-xylose biosynthetic process3.30E-03
79GO:0010363: regulation of plant-type hypersensitive response3.30E-03
80GO:0010188: response to microbial phytotoxin3.30E-03
81GO:0015713: phosphoglycerate transport3.30E-03
82GO:0016310: phosphorylation3.71E-03
83GO:0031365: N-terminal protein amino acid modification4.23E-03
84GO:0009435: NAD biosynthetic process4.23E-03
85GO:0045927: positive regulation of growth4.23E-03
86GO:0098719: sodium ion import across plasma membrane4.23E-03
87GO:0071423: malate transmembrane transport4.23E-03
88GO:0009636: response to toxic substance4.59E-03
89GO:0010264: myo-inositol hexakisphosphate biosynthetic process5.24E-03
90GO:0042732: D-xylose metabolic process5.24E-03
91GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity5.24E-03
92GO:0060918: auxin transport5.24E-03
93GO:0006139: nucleobase-containing compound metabolic process5.24E-03
94GO:0042176: regulation of protein catabolic process5.24E-03
95GO:0010315: auxin efflux5.24E-03
96GO:0009643: photosynthetic acclimation5.24E-03
97GO:0035435: phosphate ion transmembrane transport5.24E-03
98GO:0009617: response to bacterium5.61E-03
99GO:0009751: response to salicylic acid5.90E-03
100GO:0010183: pollen tube guidance6.57E-03
101GO:0010193: response to ozone7.03E-03
102GO:0007050: cell cycle arrest7.48E-03
103GO:1900056: negative regulation of leaf senescence7.48E-03
104GO:0080186: developmental vegetative growth7.48E-03
105GO:0000122: negative regulation of transcription from RNA polymerase II promoter7.48E-03
106GO:2000014: regulation of endosperm development7.48E-03
107GO:0008272: sulfate transport7.48E-03
108GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline8.71E-03
109GO:0009819: drought recovery8.71E-03
110GO:0006491: N-glycan processing8.71E-03
111GO:0006468: protein phosphorylation9.28E-03
112GO:2000031: regulation of salicylic acid mediated signaling pathway1.00E-02
113GO:0006002: fructose 6-phosphate metabolic process1.00E-02
114GO:0010120: camalexin biosynthetic process1.00E-02
115GO:0009816: defense response to bacterium, incompatible interaction1.08E-02
116GO:0010112: regulation of systemic acquired resistance1.14E-02
117GO:0048589: developmental growth1.14E-02
118GO:0006888: ER to Golgi vesicle-mediated transport1.20E-02
119GO:0051453: regulation of intracellular pH1.28E-02
120GO:1900426: positive regulation of defense response to bacterium1.28E-02
121GO:0043067: regulation of programmed cell death1.28E-02
122GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.28E-02
123GO:0008202: steroid metabolic process1.28E-02
124GO:0008219: cell death1.34E-02
125GO:0043069: negative regulation of programmed cell death1.43E-02
126GO:0051555: flavonol biosynthetic process1.43E-02
127GO:0009870: defense response signaling pathway, resistance gene-dependent1.43E-02
128GO:0006032: chitin catabolic process1.43E-02
129GO:0009407: toxin catabolic process1.48E-02
130GO:0010043: response to zinc ion1.55E-02
131GO:0009631: cold acclimation1.55E-02
132GO:0009089: lysine biosynthetic process via diaminopimelate1.58E-02
133GO:0000272: polysaccharide catabolic process1.58E-02
134GO:0000724: double-strand break repair via homologous recombination1.62E-02
135GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.74E-02
136GO:0006790: sulfur compound metabolic process1.74E-02
137GO:0016925: protein sumoylation1.74E-02
138GO:0010150: leaf senescence1.83E-02
139GO:0050826: response to freezing1.91E-02
140GO:0055046: microgametogenesis1.91E-02
141GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.91E-02
142GO:0006626: protein targeting to mitochondrion1.91E-02
143GO:0010102: lateral root morphogenesis1.91E-02
144GO:2000028: regulation of photoperiodism, flowering1.91E-02
145GO:0006897: endocytosis2.02E-02
146GO:0006631: fatty acid metabolic process2.02E-02
147GO:0006541: glutamine metabolic process2.08E-02
148GO:0007034: vacuolar transport2.08E-02
149GO:0002237: response to molecule of bacterial origin2.08E-02
150GO:0042542: response to hydrogen peroxide2.11E-02
151GO:0046854: phosphatidylinositol phosphorylation2.26E-02
152GO:0010053: root epidermal cell differentiation2.26E-02
153GO:0042343: indole glucosinolate metabolic process2.26E-02
154GO:0007030: Golgi organization2.26E-02
155GO:0010039: response to iron ion2.26E-02
156GO:0071732: cellular response to nitric oxide2.26E-02
157GO:0070588: calcium ion transmembrane transport2.26E-02
158GO:0000209: protein polyubiquitination2.28E-02
159GO:0008643: carbohydrate transport2.37E-02
160GO:0006636: unsaturated fatty acid biosynthetic process2.44E-02
161GO:0034976: response to endoplasmic reticulum stress2.44E-02
162GO:0006487: protein N-linked glycosylation2.62E-02
163GO:0009116: nucleoside metabolic process2.62E-02
164GO:0006289: nucleotide-excision repair2.62E-02
165GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.66E-02
166GO:0000165: MAPK cascade2.66E-02
167GO:0098542: defense response to other organism3.01E-02
168GO:0006334: nucleosome assembly3.01E-02
169GO:0031408: oxylipin biosynthetic process3.01E-02
170GO:0051321: meiotic cell cycle3.01E-02
171GO:0048278: vesicle docking3.01E-02
172GO:0016998: cell wall macromolecule catabolic process3.01E-02
173GO:0006952: defense response3.15E-02
174GO:0080092: regulation of pollen tube growth3.21E-02
175GO:0071456: cellular response to hypoxia3.21E-02
176GO:0010017: red or far-red light signaling pathway3.21E-02
177GO:2000022: regulation of jasmonic acid mediated signaling pathway3.21E-02
178GO:0030433: ubiquitin-dependent ERAD pathway3.21E-02
179GO:0015031: protein transport3.22E-02
180GO:0009625: response to insect3.42E-02
181GO:0010227: floral organ abscission3.42E-02
182GO:0006012: galactose metabolic process3.42E-02
183GO:0071369: cellular response to ethylene stimulus3.42E-02
184GO:0042127: regulation of cell proliferation3.63E-02
185GO:0009306: protein secretion3.63E-02
186GO:0009626: plant-type hypersensitive response3.72E-02
187GO:0009620: response to fungus3.84E-02
188GO:0042147: retrograde transport, endosome to Golgi3.84E-02
189GO:0042391: regulation of membrane potential4.06E-02
190GO:0010051: xylem and phloem pattern formation4.06E-02
191GO:0009958: positive gravitropism4.28E-02
192GO:0009960: endosperm development4.28E-02
193GO:0061025: membrane fusion4.51E-02
194GO:0006814: sodium ion transport4.51E-02
195GO:0048544: recognition of pollen4.51E-02
196GO:0009749: response to glucose4.74E-02
197GO:0000302: response to reactive oxygen species4.97E-02
198GO:0006891: intra-Golgi vesicle-mediated transport4.97E-02
199GO:0002229: defense response to oomycetes4.97E-02
RankGO TermAdjusted P value
1GO:0034338: short-chain carboxylesterase activity0.00E+00
2GO:0019205: nucleobase-containing compound kinase activity0.00E+00
3GO:0051766: inositol trisphosphate kinase activity0.00E+00
4GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
5GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
6GO:0008734: L-aspartate oxidase activity0.00E+00
7GO:0051670: inulinase activity0.00E+00
8GO:0008092: cytoskeletal protein binding0.00E+00
9GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity0.00E+00
10GO:0051765: inositol tetrakisphosphate kinase activity0.00E+00
11GO:0050513: glycoprotein 2-beta-D-xylosyltransferase activity0.00E+00
12GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
13GO:0000824: inositol tetrakisphosphate 3-kinase activity4.81E-04
14GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity4.81E-04
15GO:0047326: inositol tetrakisphosphate 5-kinase activity4.81E-04
16GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity4.81E-04
17GO:0051669: fructan beta-fructosidase activity4.81E-04
18GO:0031219: levanase activity4.81E-04
19GO:0010285: L,L-diaminopimelate aminotransferase activity4.81E-04
20GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity4.81E-04
21GO:0004708: MAP kinase kinase activity6.06E-04
22GO:0004566: beta-glucuronidase activity1.04E-03
23GO:0009883: red or far-red light photoreceptor activity1.04E-03
24GO:0008460: dTDP-glucose 4,6-dehydratase activity1.04E-03
25GO:0010280: UDP-L-rhamnose synthase activity1.04E-03
26GO:0015152: glucose-6-phosphate transmembrane transporter activity1.04E-03
27GO:0008428: ribonuclease inhibitor activity1.04E-03
28GO:0008805: carbon-monoxide oxygenase activity1.04E-03
29GO:1901677: phosphate transmembrane transporter activity1.04E-03
30GO:0050377: UDP-glucose 4,6-dehydratase activity1.04E-03
31GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity1.04E-03
32GO:0015117: thiosulfate transmembrane transporter activity1.04E-03
33GO:0016301: kinase activity1.15E-03
34GO:0004568: chitinase activity1.21E-03
35GO:0005545: 1-phosphatidylinositol binding1.21E-03
36GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.30E-03
37GO:0071917: triose-phosphate transmembrane transporter activity1.69E-03
38GO:0005457: GDP-fucose transmembrane transporter activity1.69E-03
39GO:0022857: transmembrane transporter activity1.69E-03
40GO:0005310: dicarboxylic acid transmembrane transporter activity1.69E-03
41GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.69E-03
42GO:0015141: succinate transmembrane transporter activity1.69E-03
43GO:0008020: G-protein coupled photoreceptor activity1.69E-03
44GO:0030247: polysaccharide binding1.85E-03
45GO:0004867: serine-type endopeptidase inhibitor activity2.30E-03
46GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity2.45E-03
47GO:0017077: oxidative phosphorylation uncoupler activity2.45E-03
48GO:0004749: ribose phosphate diphosphokinase activity2.45E-03
49GO:0019201: nucleotide kinase activity2.45E-03
50GO:0015131: oxaloacetate transmembrane transporter activity2.45E-03
51GO:0035529: NADH pyrophosphatase activity2.45E-03
52GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity2.45E-03
53GO:0015120: phosphoglycerate transmembrane transporter activity3.30E-03
54GO:0009916: alternative oxidase activity3.30E-03
55GO:0015297: antiporter activity3.99E-03
56GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.23E-03
57GO:0005459: UDP-galactose transmembrane transporter activity4.23E-03
58GO:0045300: acyl-[acyl-carrier-protein] desaturase activity4.23E-03
59GO:0004623: phospholipase A2 activity4.23E-03
60GO:0042285: xylosyltransferase activity4.23E-03
61GO:0008948: oxaloacetate decarboxylase activity4.23E-03
62GO:0031386: protein tag4.23E-03
63GO:0047631: ADP-ribose diphosphatase activity4.23E-03
64GO:0004040: amidase activity4.23E-03
65GO:0005524: ATP binding4.36E-03
66GO:0004674: protein serine/threonine kinase activity4.98E-03
67GO:0048040: UDP-glucuronate decarboxylase activity5.24E-03
68GO:0008474: palmitoyl-(protein) hydrolase activity5.24E-03
69GO:0047714: galactolipase activity5.24E-03
70GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity5.24E-03
71GO:0000210: NAD+ diphosphatase activity5.24E-03
72GO:0035252: UDP-xylosyltransferase activity5.24E-03
73GO:0046872: metal ion binding5.37E-03
74GO:0030276: clathrin binding5.69E-03
75GO:0016853: isomerase activity6.12E-03
76GO:0070403: NAD+ binding6.32E-03
77GO:0004017: adenylate kinase activity6.32E-03
78GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity6.32E-03
79GO:0004656: procollagen-proline 4-dioxygenase activity6.32E-03
80GO:0005261: cation channel activity6.32E-03
81GO:0005338: nucleotide-sugar transmembrane transporter activity7.48E-03
82GO:0008235: metalloexopeptidase activity7.48E-03
83GO:0102425: myricetin 3-O-glucosyltransferase activity7.48E-03
84GO:0102360: daphnetin 3-O-glucosyltransferase activity7.48E-03
85GO:0009881: photoreceptor activity7.48E-03
86GO:0003872: 6-phosphofructokinase activity7.48E-03
87GO:0015140: malate transmembrane transporter activity7.48E-03
88GO:0004620: phospholipase activity7.48E-03
89GO:0004034: aldose 1-epimerase activity8.71E-03
90GO:0047893: flavonol 3-O-glucosyltransferase activity8.71E-03
91GO:0004525: ribonuclease III activity8.71E-03
92GO:0005544: calcium-dependent phospholipid binding8.71E-03
93GO:0043531: ADP binding9.59E-03
94GO:0008142: oxysterol binding1.00E-02
95GO:0008970: phosphatidylcholine 1-acylhydrolase activity1.00E-02
96GO:0004806: triglyceride lipase activity1.20E-02
97GO:0031490: chromatin DNA binding1.28E-02
98GO:0030234: enzyme regulator activity1.43E-02
99GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity1.43E-02
100GO:0030145: manganese ion binding1.55E-02
101GO:0004177: aminopeptidase activity1.58E-02
102GO:0008559: xenobiotic-transporting ATPase activity1.58E-02
103GO:0047372: acylglycerol lipase activity1.58E-02
104GO:0015386: potassium:proton antiporter activity1.58E-02
105GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.70E-02
106GO:0015116: sulfate transmembrane transporter activity1.74E-02
107GO:0005509: calcium ion binding1.77E-02
108GO:0000155: phosphorelay sensor kinase activity1.91E-02
109GO:0005388: calcium-transporting ATPase activity1.91E-02
110GO:0004565: beta-galactosidase activity1.91E-02
111GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.91E-02
112GO:0005315: inorganic phosphate transmembrane transporter activity1.91E-02
113GO:0031624: ubiquitin conjugating enzyme binding2.08E-02
114GO:0004364: glutathione transferase activity2.11E-02
115GO:0030552: cAMP binding2.26E-02
116GO:0030553: cGMP binding2.26E-02
117GO:0008061: chitin binding2.26E-02
118GO:0003712: transcription cofactor activity2.26E-02
119GO:0031418: L-ascorbic acid binding2.62E-02
120GO:0001046: core promoter sequence-specific DNA binding2.62E-02
121GO:0005216: ion channel activity2.82E-02
122GO:0008408: 3'-5' exonuclease activity3.01E-02
123GO:0035251: UDP-glucosyltransferase activity3.01E-02
124GO:0016298: lipase activity3.06E-02
125GO:0031625: ubiquitin protein ligase binding3.28E-02
126GO:0045735: nutrient reservoir activity3.50E-02
127GO:0003727: single-stranded RNA binding3.63E-02
128GO:0003756: protein disulfide isomerase activity3.63E-02
129GO:0016787: hydrolase activity3.69E-02
130GO:0047134: protein-disulfide reductase activity3.84E-02
131GO:0005102: receptor binding3.84E-02
132GO:0005249: voltage-gated potassium channel activity4.06E-02
133GO:0030551: cyclic nucleotide binding4.06E-02
134GO:0004527: exonuclease activity4.28E-02
135GO:0001085: RNA polymerase II transcription factor binding4.28E-02
136GO:0004791: thioredoxin-disulfide reductase activity4.51E-02
137GO:0010181: FMN binding4.51E-02
138GO:0004872: receptor activity4.74E-02
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Gene type



Gene DE type