Gene: AT3G54790
     

Gene description


TAIR ID: AT3G54790

Short description: ARM repeat superfamily protein

Pathogen responsiveness: -0.39

General responsiveness: -2.47

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


protein ubiquitination


GO cellular component


unkown


GO molecular function


ubiquitin-protein transferase activity


Protein domain


PfamPF00514, Armadillo/beta-catenin-like repeat
PfamPF04564, U-box domain
SMARTSM00504, Ubox
SMARTSM00185, ARM

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G51600, AT1G24260

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


10 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h-1.611.20E-07
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d1.903.59E-10
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d1.792.04E-09
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.976.15E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.123.33E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.661.39E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.573.25E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.376.61E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.924.62E-10
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h-1.556.63E-06






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